| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674790
Identifier: 21674790
GI number: 21674790
Start: 1878548
End: 1879465
Strand: Reverse
Name: 21674790
Synonym: CT1979
Alternate gene names: NA
Gene position: 1879465-1878548 (Counterclockwise)
Preceding gene: 21674792
Following gene: 21674781
Centisome position: 87.22
GC content: 60.24
Gene sequence:
>918_bases GTGTTATTTCACAATCAAACCATTGACTTTACCATGCTTGCAACCAACGAAAACCGCCTTGTTGAAATCCTGCTTCAATG CCAGCCCGGCCAGCCACGTACCCGTGGCACATGGGAGGTTGATCATCAGGGCACGCCCTTCATTTTGCCCTCCATTGGCG GCATCACCCTCAATCTTCAGGTCGGCGACCCGGCGTTTGGCTGGGAGGGTGACCACATCGAGCCAGGCGTGAGCTGCACT GCCGATACGCACAAACCTTTCGAGCACCCCAACGTTACCGTGCAGATGCTGAGCTGCGTGGGCAACACGGCCACCATCGT CTCCGGCGAGGCGAAGGGCGAGAGCGGGGTGGTGATCGGCCATCACGGCGGTTCGGAGCACATCATTGTCGATTTTCCGC GCGAAGTGAAGGAGAAGATGGCCTATGGCGACACCATCATGGTGCGCTCGAAAGGGCAGGGACTCAAGCTGACCGACTTT CCGGATGTTTCGCTCTTCAACCTCGACCCGGCGCTGCTGGCGAAAATGAAGATCAATATTGCCGAGGACGGTGTGCTCGA AGTGCCGGTAACGACACTGGTCCCGGCGTACTGCATGGGTTCCGGTATCGGTTCGGCGCACGTGGCCAAGGGCGATTACG ACATCGTGACCAGCGATCCTGGTGCGGTCGAAGAGTTTGGCCTCGACCGTATCCGCTTCGGCGACTTCGTGGCGCTGCTC GACCAGGACAATCGCTACGGGCGAGCCTACCGCAAGGGGGCCGTCACCATCGGCGTCGTGGTGCACAGCGACTGCCGCGA AGCGGGCCACGGTCCCGGCGTTACCACCATTATGACCTGCGCCACTCGCGGCATCCGCCCGGTCATAGACCCCAAAGCCA ACATCGCCGACCTGCTTGGAATAGGCACAAGGTTGTGA
Upstream 100 bases:
>100_bases TTTTTTTAAGAGGATTTTTTCATGGATAGCGATGTTTGTATCGAACCTTTTCATTGTTGAGTAGTCACAGCGTTACGTCG CGCCGGGTACTTCTCGGGTA
Downstream 100 bases:
>100_bases TTGCGCGGCAGGGTTTGCTGTTTTTGCAGGGGCGATTTCGATTTGCGAGGTCGCCTTTTTTTACGCAAACGAAGCAACCC CATCCGGGCTGGACAAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MLFHNQTIDFTMLATNENRLVEILLQCQPGQPRTRGTWEVDHQGTPFILPSIGGITLNLQVGDPAFGWEGDHIEPGVSCT ADTHKPFEHPNVTVQMLSCVGNTATIVSGEAKGESGVVIGHHGGSEHIIVDFPREVKEKMAYGDTIMVRSKGQGLKLTDF PDVSLFNLDPALLAKMKINIAEDGVLEVPVTTLVPAYCMGSGIGSAHVAKGDYDIVTSDPGAVEEFGLDRIRFGDFVALL DQDNRYGRAYRKGAVTIGVVVHSDCREAGHGPGVTTIMTCATRGIRPVIDPKANIADLLGIGTRL
Sequences:
>Translated_305_residues MLFHNQTIDFTMLATNENRLVEILLQCQPGQPRTRGTWEVDHQGTPFILPSIGGITLNLQVGDPAFGWEGDHIEPGVSCT ADTHKPFEHPNVTVQMLSCVGNTATIVSGEAKGESGVVIGHHGGSEHIIVDFPREVKEKMAYGDTIMVRSKGQGLKLTDF PDVSLFNLDPALLAKMKINIAEDGVLEVPVTTLVPAYCMGSGIGSAHVAKGDYDIVTSDPGAVEEFGLDRIRFGDFVALL DQDNRYGRAYRKGAVTIGVVVHSDCREAGHGPGVTTIMTCATRGIRPVIDPKANIADLLGIGTRL >Mature_305_residues MLFHNQTIDFTMLATNENRLVEILLQCQPGQPRTRGTWEVDHQGTPFILPSIGGITLNLQVGDPAFGWEGDHIEPGVSCT ADTHKPFEHPNVTVQMLSCVGNTATIVSGEAKGESGVVIGHHGGSEHIIVDFPREVKEKMAYGDTIMVRSKGQGLKLTDF PDVSLFNLDPALLAKMKINIAEDGVLEVPVTTLVPAYCMGSGIGSAHVAKGDYDIVTSDPGAVEEFGLDRIRFGDFVALL DQDNRYGRAYRKGAVTIGVVVHSDCREAGHGPGVTTIMTCATRGIRPVIDPKANIADLLGIGTRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32741; Mature: 32741
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFHNQTIDFTMLATNENRLVEILLQCQPGQPRTRGTWEVDHQGTPFILPSIGGITLNLQ CCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCCEEEECCCCEEEEEE VGDPAFGWEGDHIEPGVSCTADTHKPFEHPNVTVQMLSCVGNTATIVSGEAKGESGVVIG ECCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCEEEE HHGGSEHIIVDFPREVKEKMAYGDTIMVRSKGQGLKLTDFPDVSLFNLDPALLAKMKINI ECCCCCCEEEECCHHHHHHHHCCCEEEEEECCCCEEECCCCCCEEEECCHHHEEEEEEEE AEDGVLEVPVTTLVPAYCMGSGIGSAHVAKGDYDIVTSDPGAVEEFGLDRIRFGDFVALL CCCCEEECCHHHHHHHHHHCCCCCCCEEECCCEEEEECCCCCHHHHCCCEEECCCEEEEE DQDNRYGRAYRKGAVTIGVVVHSDCREAGHGPGVTTIMTCATRGIRPVIDPKANIADLLG ECCCCCCHHHHCCCEEEEEEEECCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH IGTRL CCCCC >Mature Secondary Structure MLFHNQTIDFTMLATNENRLVEILLQCQPGQPRTRGTWEVDHQGTPFILPSIGGITLNLQ CCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCCEEEECCCCEEEEEE VGDPAFGWEGDHIEPGVSCTADTHKPFEHPNVTVQMLSCVGNTATIVSGEAKGESGVVIG ECCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCEEEE HHGGSEHIIVDFPREVKEKMAYGDTIMVRSKGQGLKLTDFPDVSLFNLDPALLAKMKINI ECCCCCCEEEECCHHHHHHHHCCCEEEEEECCCCEEECCCCCCEEEECCHHHEEEEEEEE AEDGVLEVPVTTLVPAYCMGSGIGSAHVAKGDYDIVTSDPGAVEEFGLDRIRFGDFVALL CCCCEEECCHHHHHHHHHHCCCCCCCEEECCCEEEEECCCCCHHHHCCCEEECCCEEEEE DQDNRYGRAYRKGAVTIGVVVHSDCREAGHGPGVTTIMTCATRGIRPVIDPKANIADLLG ECCCCCCHHHHCCCEEEEEEEECCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH IGTRL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA