Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21674778

Identifier: 21674778

GI number: 21674778

Start: 1865960

End: 1866415

Strand: Reverse

Name: 21674778

Synonym: CT1967

Alternate gene names: NA

Gene position: 1866415-1865960 (Counterclockwise)

Preceding gene: 21674781

Following gene: 21674777

Centisome position: 86.61

GC content: 40.57

Gene sequence:

>456_bases
ATGAAAAAGAACAGAAATACGGTAATCGGAATATTTAGCATTGTTTTCGGAGGCATGATCTATGTGTTATGGCGTAAGCA
AAGCTTGCTCATGTTTTCATGGTTTTATTCCATAGGGCTAAAACCTTTTGTTGCCTTATTGAGAGAATTTGCTCATTCAT
ACTCATTGGTCATGCCAGAATGGGTTTACTTTTCTTTGCCAAATGCACTGTGGGCGTTTGGAGGCATCTTGCTTTTTTAC
AGCATTTGGAAGGATGCCTGTTCAGAGAGGATGTTCTGGGTGCTATTGTTTTCCATGACAGCAGTTGGCTCCGAAATTGG
CCAATTGGTAGGAATCGTTCCGGGAACCTACGATACTACTGACATATCTCTAATGCTCATCTTCATTCCGCTAGCAATTA
CCATAGGTAACAAAAATCACGCAATAAAGGAGGTAAGCGATGCAAAAGGTCTATAA

Upstream 100 bases:

>100_bases
GTGGTAGCTTTTAAGGGATTTCATTACAGAACACTGTTGATGAGCGTCACATGAAACGAAATATGAAGAAAAGAACTAAT
AACTTGTTAGCTTCAAGAAC

Downstream 100 bases:

>100_bases
ACATGTACTGTCTGGGCTTTTATTATTAATGCTCTGTATATTGGCGGCAGGAAGCTTTGGCGTTGGCGCGGCAGGAAACT
CCGACGATGGCGCTACGACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKKNRNTVIGIFSIVFGGMIYVLWRKQSLLMFSWFYSIGLKPFVALLREFAHSYSLVMPEWVYFSLPNALWAFGGILLFY
SIWKDACSERMFWVLLFSMTAVGSEIGQLVGIVPGTYDTTDISLMLIFIPLAITIGNKNHAIKEVSDAKGL

Sequences:

>Translated_151_residues
MKKNRNTVIGIFSIVFGGMIYVLWRKQSLLMFSWFYSIGLKPFVALLREFAHSYSLVMPEWVYFSLPNALWAFGGILLFY
SIWKDACSERMFWVLLFSMTAVGSEIGQLVGIVPGTYDTTDISLMLIFIPLAITIGNKNHAIKEVSDAKGL
>Mature_151_residues
MKKNRNTVIGIFSIVFGGMIYVLWRKQSLLMFSWFYSIGLKPFVALLREFAHSYSLVMPEWVYFSLPNALWAFGGILLFY
SIWKDACSERMFWVLLFSMTAVGSEIGQLVGIVPGTYDTTDISLMLIFIPLAITIGNKNHAIKEVSDAKGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17133; Mature: 17133

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNRNTVIGIFSIVFGGMIYVLWRKQSLLMFSWFYSIGLKPFVALLREFAHSYSLVMPE
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH
WVYFSLPNALWAFGGILLFYSIWKDACSERMFWVLLFSMTAVGSEIGQLVGIVPGTYDTT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
DISLMLIFIPLAITIGNKNHAIKEVSDAKGL
HHHHHHHHHHHHHEECCCCCHHHHHHHCCCC
>Mature Secondary Structure
MKKNRNTVIGIFSIVFGGMIYVLWRKQSLLMFSWFYSIGLKPFVALLREFAHSYSLVMPE
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH
WVYFSLPNALWAFGGILLFYSIWKDACSERMFWVLLFSMTAVGSEIGQLVGIVPGTYDTT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
DISLMLIFIPLAITIGNKNHAIKEVSDAKGL
HHHHHHHHHHHHHEECCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA