| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is galE [C]
Identifier: 21674761
GI number: 21674761
Start: 1840582
End: 1841589
Strand: Reverse
Name: galE [C]
Synonym: CT1949
Alternate gene names: 21674761
Gene position: 1841589-1840582 (Counterclockwise)
Preceding gene: 21674766
Following gene: 21674757
Centisome position: 85.46
GC content: 61.31
Gene sequence:
>1008_bases ATGTTTATGGACGGAGTGATTCTGGTTACCGGTTCGACCGGTTTTATCGGCTCGAGAATGGTCGATGCCCTCGTTGGGCA GGGCCGGCGGGTGCGGGTACTGCTCAGGCCTGAAAGCCGCAGCACATTGTCGGCGGGATATCGCGAAGGCGTTGAAGAGG TTTGCGCCGCTTACGGCGATCCGGAAGCCCTCGGGAGAGCGGTTTCTGGCGTGGCATCGATCATCCACCTTGCCGGCGTG ACCAAAGCGGTCGATGAAGCAGGATTTGCCGAGGGAAACGTGAGGCCGGTTGAAAATCTGCTCGAAGCGGTGAAACGCCA CAATCCGGGGCTTGGCCGTTTTTTGCTGGTTTCGTCGCTTGCCGCCATGGGCCCGGCATCGTCACCGTCTCCGGGCGTCA TGGAATCTGACCGGCCTCGCCCGGTGAGCGCTTACGGGCGCAGCAAGCTGCTCGGCGAAGCGGTTGCGCGGCGACACGCC GGAAGCGTTCCGCTCACCATTGTTCGGCCACCTGCCGTGTACGGTCCTGGCGATCGCGATATTCTCGAAGTTTTCACCAT GATGAAGAACGGATATCTGCTCTCGGCGGGTCCCGGGCGACGCCAGCGTTTCAGCATGATCCATGTCGATGAGCTGATCC GCGGAATTTTGCTCGCACTTGACTCGGAAAACGCCGCCGGTCAGGACTATTTTATCACCTCGCCTCGCGGCTACGCCTGG GACGAGGTGATCGCGGCGGCCCGTCCGGTGCTCGGTTTCAGGCGACTGCTTCGCCTCAACCTGCCGAAGCCGCTGGTGTT CGGTTTGGGCGCGGTGCTCGGCGGCGTTGCTAAGTTGACCGGCTGCCCAGCTCTGATCAACAAGGACAAAGCCAATGAAC TGGTGCAGGATTTCTGGGTATGCAGCCCGGAAAAAGCGGAGCGGGAACTCGGGTTTACCGCGAGCATTCCACTGGAAACG GGGGTTCCCGAAACGTTGGTGTGGTACCGGCAGCAGGGGTGGCTGTAG
Upstream 100 bases:
>100_bases TTTTGATAAACAGGGCTGTGTTTTTTGTCCGCTCGTCAGGGCGTTGTCTGTTGGTGTGCACGGGCAGTAAAGGACGGTAA TTTCTGGATAAAAGAGGATA
Downstream 100 bases:
>100_bases AGAACAGCTGTTCACTCAAGCCGCTGCTGTTTTCCTCAATTGAAGAGTTGCTGCATCAGTTTGAGCAGGGTGAATCTGTC GTCGGGCGAGGGAATAATGC
Product: NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein
Products: UDPglucoseal [C]
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MFMDGVILVTGSTGFIGSRMVDALVGQGRRVRVLLRPESRSTLSAGYREGVEEVCAAYGDPEALGRAVSGVASIIHLAGV TKAVDEAGFAEGNVRPVENLLEAVKRHNPGLGRFLLVSSLAAMGPASSPSPGVMESDRPRPVSAYGRSKLLGEAVARRHA GSVPLTIVRPPAVYGPGDRDILEVFTMMKNGYLLSAGPGRRQRFSMIHVDELIRGILLALDSENAAGQDYFITSPRGYAW DEVIAAARPVLGFRRLLRLNLPKPLVFGLGAVLGGVAKLTGCPALINKDKANELVQDFWVCSPEKAERELGFTASIPLET GVPETLVWYRQQGWL
Sequences:
>Translated_335_residues MFMDGVILVTGSTGFIGSRMVDALVGQGRRVRVLLRPESRSTLSAGYREGVEEVCAAYGDPEALGRAVSGVASIIHLAGV TKAVDEAGFAEGNVRPVENLLEAVKRHNPGLGRFLLVSSLAAMGPASSPSPGVMESDRPRPVSAYGRSKLLGEAVARRHA GSVPLTIVRPPAVYGPGDRDILEVFTMMKNGYLLSAGPGRRQRFSMIHVDELIRGILLALDSENAAGQDYFITSPRGYAW DEVIAAARPVLGFRRLLRLNLPKPLVFGLGAVLGGVAKLTGCPALINKDKANELVQDFWVCSPEKAERELGFTASIPLET GVPETLVWYRQQGWL >Mature_335_residues MFMDGVILVTGSTGFIGSRMVDALVGQGRRVRVLLRPESRSTLSAGYREGVEEVCAAYGDPEALGRAVSGVASIIHLAGV TKAVDEAGFAEGNVRPVENLLEAVKRHNPGLGRFLLVSSLAAMGPASSPSPGVMESDRPRPVSAYGRSKLLGEAVARRHA GSVPLTIVRPPAVYGPGDRDILEVFTMMKNGYLLSAGPGRRQRFSMIHVDELIRGILLALDSENAAGQDYFITSPRGYAW DEVIAAARPVLGFRRLLRLNLPKPLVFGLGAVLGGVAKLTGCPALINKDKANELVQDFWVCSPEKAERELGFTASIPLET GVPETLVWYRQQGWL
Specific function: Putative nucleotide sugar epimerase/dehydrogenase [H]
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: 5.1.3.2 [C]
Molecular weight: Translated: 35959; Mature: 35959
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMDGVILVTGSTGFIGSRMVDALVGQGRRVRVLLRPESRSTLSAGYREGVEEVCAAYGD CCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC PEALGRAVSGVASIIHLAGVTKAVDEAGFAEGNVRPVENLLEAVKRHNPGLGRFLLVSSL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH AAMGPASSPSPGVMESDRPRPVSAYGRSKLLGEAVARRHAGSVPLTIVRPPAVYGPGDRD HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHH ILEVFTMMKNGYLLSAGPGRRQRFSMIHVDELIRGILLALDSENAAGQDYFITSPRGYAW HHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCH DEVIAAARPVLGFRRLLRLNLPKPLVFGLGAVLGGVAKLTGCPALINKDKANELVQDFWV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHC CSPEKAERELGFTASIPLETGVPETLVWYRQQGWL CCCHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MFMDGVILVTGSTGFIGSRMVDALVGQGRRVRVLLRPESRSTLSAGYREGVEEVCAAYGD CCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC PEALGRAVSGVASIIHLAGVTKAVDEAGFAEGNVRPVENLLEAVKRHNPGLGRFLLVSSL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH AAMGPASSPSPGVMESDRPRPVSAYGRSKLLGEAVARRHAGSVPLTIVRPPAVYGPGDRD HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHH ILEVFTMMKNGYLLSAGPGRRQRFSMIHVDELIRGILLALDSENAAGQDYFITSPRGYAW HHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCH DEVIAAARPVLGFRRLLRLNLPKPLVFGLGAVLGGVAKLTGCPALINKDKANELVQDFWV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHC CSPEKAERELGFTASIPLETGVPETLVWYRQQGWL CCCHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NAD+ [C]
Metal ions: NA
Kcat value (1/min): 57600 [C]
Specific activity: 233.3
Km value (mM): 0.256 {UDPgalactose}} 0.225 {UDPgalactose}} 0.2 {UDPgalactose}} 0.18 {UDPgalactose}} 0.16 {UDPgalactose}} 0.14 {UDPgalactose}} 0.048 {UDPgalactose}} 0.026 {UDPgalactose}} [C]
Substrates: UDPglucose [C]
Specific reaction: UDPglucose <==> UDPglucoseal [C]
General reaction: Epimerization (specificity for carbon forming a hexosulose) [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]