Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is ydbL [C]

Identifier: 21674538

GI number: 21674538

Start: 1633409

End: 1633765

Strand: Reverse

Name: ydbL [C]

Synonym: CT1722

Alternate gene names: 21674538

Gene position: 1633765-1633409 (Counterclockwise)

Preceding gene: 21674539

Following gene: 21674537

Centisome position: 75.81

GC content: 56.86

Gene sequence:

>357_bases
ATGCACATGATAACAACATATCGTCTCGCGACGCTGGCCAAAACCTTCGTCCTCTTCTTCACCATTCTTGCGGCATCGGC
GGCCTCCGCCTTTGCGCTCGACCTCGAAACAGCCAGAGCAAAGGGGCTTGTCGGCGAGGTTGACAACGGCTACATCGCCA
TTCCGCCCGGAGCGGGCACCGAGGCTCAACAGCTGGTTGAAACCGTGAACAAGCAGCGCCTGGCTGTTTATTCAGAGATT
GCCGCCAAGAATGGCATTTCGGTCGAAGTGACCGGTCAGCGCACCTTCGAGAAGCGCTATCCCAGCTTCCCCGCCGGCAC
CTGGGTAAAGATAAAGGGCGTATGGTCCAAAAAGTAA

Upstream 100 bases:

>100_bases
GAACATCAAGATCGACCACGAAATCAGGATCAGGGTCGATCGCGACATCGACAACGCTATCGGTAAAAGAACGGACATTT
TCTAATCAGGGAGGATCACC

Downstream 100 bases:

>100_bases
GCGATCTCTTGTGAAGTGGCTTCTGCGTATCATCGGAACACTCCTGCTGCTCACGATCCTTGCTGTTTGCGGAGCGTGGC
TGGCATTTCCCTGGTATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MHMITTYRLATLAKTFVLFFTILAASAASAFALDLETARAKGLVGEVDNGYIAIPPGAGTEAQQLVETVNKQRLAVYSEI
AAKNGISVEVTGQRTFEKRYPSFPAGTWVKIKGVWSKK

Sequences:

>Translated_118_residues
MHMITTYRLATLAKTFVLFFTILAASAASAFALDLETARAKGLVGEVDNGYIAIPPGAGTEAQQLVETVNKQRLAVYSEI
AAKNGISVEVTGQRTFEKRYPSFPAGTWVKIKGVWSKK
>Mature_118_residues
MHMITTYRLATLAKTFVLFFTILAASAASAFALDLETARAKGLVGEVDNGYIAIPPGAGTEAQQLVETVNKQRLAVYSEI
AAKNGISVEVTGQRTFEKRYPSFPAGTWVKIKGVWSKK

Specific function: Unknown

COG id: COG3784

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12796; Mature: 12796

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMITTYRLATLAKTFVLFFTILAASAASAFALDLETARAKGLVGEVDNGYIAIPPGAGT
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHCCCEEECCCCEEEECCCCCH
EAQQLVETVNKQRLAVYSEIAAKNGISVEVTGQRTFEKRYPSFPAGTWVKIKGVWSKK
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MHMITTYRLATLAKTFVLFFTILAASAASAFALDLETARAKGLVGEVDNGYIAIPPGAGT
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHCCCEEECCCCEEEECCCCCH
EAQQLVETVNKQRLAVYSEIAAKNGISVEVTGQRTFEKRYPSFPAGTWVKIKGVWSKK
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA