| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is ydbL [C]
Identifier: 21674538
GI number: 21674538
Start: 1633409
End: 1633765
Strand: Reverse
Name: ydbL [C]
Synonym: CT1722
Alternate gene names: 21674538
Gene position: 1633765-1633409 (Counterclockwise)
Preceding gene: 21674539
Following gene: 21674537
Centisome position: 75.81
GC content: 56.86
Gene sequence:
>357_bases ATGCACATGATAACAACATATCGTCTCGCGACGCTGGCCAAAACCTTCGTCCTCTTCTTCACCATTCTTGCGGCATCGGC GGCCTCCGCCTTTGCGCTCGACCTCGAAACAGCCAGAGCAAAGGGGCTTGTCGGCGAGGTTGACAACGGCTACATCGCCA TTCCGCCCGGAGCGGGCACCGAGGCTCAACAGCTGGTTGAAACCGTGAACAAGCAGCGCCTGGCTGTTTATTCAGAGATT GCCGCCAAGAATGGCATTTCGGTCGAAGTGACCGGTCAGCGCACCTTCGAGAAGCGCTATCCCAGCTTCCCCGCCGGCAC CTGGGTAAAGATAAAGGGCGTATGGTCCAAAAAGTAA
Upstream 100 bases:
>100_bases GAACATCAAGATCGACCACGAAATCAGGATCAGGGTCGATCGCGACATCGACAACGCTATCGGTAAAAGAACGGACATTT TCTAATCAGGGAGGATCACC
Downstream 100 bases:
>100_bases GCGATCTCTTGTGAAGTGGCTTCTGCGTATCATCGGAACACTCCTGCTGCTCACGATCCTTGCTGTTTGCGGAGCGTGGC TGGCATTTCCCTGGTATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MHMITTYRLATLAKTFVLFFTILAASAASAFALDLETARAKGLVGEVDNGYIAIPPGAGTEAQQLVETVNKQRLAVYSEI AAKNGISVEVTGQRTFEKRYPSFPAGTWVKIKGVWSKK
Sequences:
>Translated_118_residues MHMITTYRLATLAKTFVLFFTILAASAASAFALDLETARAKGLVGEVDNGYIAIPPGAGTEAQQLVETVNKQRLAVYSEI AAKNGISVEVTGQRTFEKRYPSFPAGTWVKIKGVWSKK >Mature_118_residues MHMITTYRLATLAKTFVLFFTILAASAASAFALDLETARAKGLVGEVDNGYIAIPPGAGTEAQQLVETVNKQRLAVYSEI AAKNGISVEVTGQRTFEKRYPSFPAGTWVKIKGVWSKK
Specific function: Unknown
COG id: COG3784
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12796; Mature: 12796
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHMITTYRLATLAKTFVLFFTILAASAASAFALDLETARAKGLVGEVDNGYIAIPPGAGT CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHCCCEEECCCCEEEECCCCCH EAQQLVETVNKQRLAVYSEIAAKNGISVEVTGQRTFEKRYPSFPAGTWVKIKGVWSKK HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MHMITTYRLATLAKTFVLFFTILAASAASAFALDLETARAKGLVGEVDNGYIAIPPGAGT CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHCCCEEECCCCEEEECCCCCH EAQQLVETVNKQRLAVYSEIAAKNGISVEVTGQRTFEKRYPSFPAGTWVKIKGVWSKK HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA