| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674534
Identifier: 21674534
GI number: 21674534
Start: 1629965
End: 1630309
Strand: Reverse
Name: 21674534
Synonym: CT1718
Alternate gene names: NA
Gene position: 1630309-1629965 (Counterclockwise)
Preceding gene: 21674535
Following gene: 21674533
Centisome position: 75.65
GC content: 46.38
Gene sequence:
>345_bases ATGAGTCATCACCACCAGACCAAGAACCTCGGCCTGTCAATTGTCATCAACGCGTTCATTTTCATGGTGATTCACCAACT CTTGCAACCGATCGTAATCAATGTTCAGCCCAAGCCGAAGCATACCCCAGGCACAAGAATTGTCCACTGTTCCATACCAG GACGACCATTATGCACATCGGCTTTTCCGTCTCCATTTTTCCGATCTGGCCGAACTTCTGCAAGGATAGAAAAGACTCGC TCGCGCAGCTCGATGTTAGTGCAGATACCTTGGAGACCACGCAACAGTTTTGAAATATCATCACGTGATTTCGTATTAAA TGTTATGGCCGATATATCGATCTGA
Upstream 100 bases:
>100_bases CAATCAGGCGCTTCGTTGCGCGCGGTCAATGGCATCCGATGTCTTCATCAATACTGATTGTCCCCACGATACGAGGGGCT GAGAGAAGACGAGAGATCCA
Downstream 100 bases:
>100_bases CCAAACACCATTTGGGGATTAAGAACGGTGCGCATGACAAAGCATAAGCGATCCTGAGCAAATAGCCACCACAGGCTTAT CTTTCAGCACCTTCCTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSHHHQTKNLGLSIVINAFIFMVIHQLLQPIVINVQPKPKHTPGTRIVHCSIPGRPLCTSAFPSPFFRSGRTSARIEKTR SRSSMLVQIPWRPRNSFEISSRDFVLNVMADISI
Sequences:
>Translated_114_residues MSHHHQTKNLGLSIVINAFIFMVIHQLLQPIVINVQPKPKHTPGTRIVHCSIPGRPLCTSAFPSPFFRSGRTSARIEKTR SRSSMLVQIPWRPRNSFEISSRDFVLNVMADISI >Mature_113_residues SHHHQTKNLGLSIVINAFIFMVIHQLLQPIVINVQPKPKHTPGTRIVHCSIPGRPLCTSAFPSPFFRSGRTSARIEKTRS RSSMLVQIPWRPRNSFEISSRDFVLNVMADISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12928; Mature: 12797
Theoretical pI: Translated: 12.17; Mature: 12.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHHHQTKNLGLSIVINAFIFMVIHQLLQPIVINVQPKPKHTPGTRIVHCSIPGRPLCTS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEECCCCCCCCC AFPSPFFRSGRTSARIEKTRSRSSMLVQIPWRPRNSFEISSRDFVLNVMADISI CCCCHHHHCCCCCHHHHHHCCCCCEEEEECCCCCCCEEECCCCEEEEEEEECCC >Mature Secondary Structure SHHHQTKNLGLSIVINAFIFMVIHQLLQPIVINVQPKPKHTPGTRIVHCSIPGRPLCTS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEECCCCCCCCC AFPSPFFRSGRTSARIEKTRSRSSMLVQIPWRPRNSFEISSRDFVLNVMADISI CCCCHHHHCCCCCHHHHHHCCCCCEEEEECCCCCCCEEECCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA