| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is pab [H]
Identifier: 21674529
GI number: 21674529
Start: 1622923
End: 1624809
Strand: Reverse
Name: pab [H]
Synonym: CT1712
Alternate gene names: 21674529
Gene position: 1624809-1622923 (Counterclockwise)
Preceding gene: 21674530
Following gene: 21674528
Centisome position: 75.4
GC content: 63.49
Gene sequence:
>1887_bases GTGGCTCGAAGAGGTGCTCGGGAAACCCATTCTGATCGAAGCCCGCGTCCGGTAATGGCTTTGTACGAAAAGCTTGCTAG TCCGGGATCGCTCTGGTTTGAATCGACCTTGCCCGGCGCGCTCTACGGCGATTCCCTCTTTTTCTCCGATCCGCTCGAAA CGCTGACGCTCCATGCGGGCGACAGCGTCGCGCCGTGGTTCGCCACGCTGGAGTCGCGGCTCGACGCAGGCCTCTGCCTC GCTGGATGGCTCAGCTATGAGGCGGGTTACCTGCTCGATCCGGCACTCGCGGCTCTCGCATCTGCCGGGGCTGATCGCGA GCTTCTTGGCTGGTTCGGCGTCTATGGTCGCCCGGAGCGCGTCCGCCGCGAAACGGTTGAGGCCGAGGACGCGGCGGCAG CGGCGCGGAGCTGCGCAGTCAGCGGATTCGGTTTCGAGTTCAGCGAGGCGGAGTATTGCGAGCGCATCGACAGACTTCGG ACTGAGATCGCGGCGGGCAACGTCTATCAGGCAAACTTCACCGGGCGCTGCCGCTTCAGCTTCGACGGTGCTGTCGAAGC GCTTTACGTCAAGATGAAGCGTCGCCAACCCTCGCCGTGGTCGGCCTTCCTCAACACCGGCGACCGTCAGATTCTTTCCT TTTCCCCTGAACTCTTTTTCGCCAGCGATGGCCGCTTGATCGAAACCATGCCGATGAAGGGCACCGCGCCGCGCCGCGAG CGGCCCGAAGAAGACCTCGCCGAAAAGGCGGGGCTGGCAAAGTGTGAGAAGAACCGCGCGGAGAACCTGATGATCGTCGA TCTGTTGCGCAACGACCTGGGGCGCATCTGCGCGACCGGCTCGGTGCAGGCCTCCGGGCTGTTCGAGACGCAGACCTATC CGACGCTGCACCAGATGGTTTCGACCGTGCGTGGCGAGCTGCGTCCGGCGACCCGGCTGCACGATCTTTTCCGGGCGCTG TTTCCCTCCGGCTCCGTGACCGGTGCGCCGAAGGTGCGGGCGATGCAGCTCATCTGCGAGTTGGAAAAAAGCCTGCGAGG GGTTTACACCGGCGCGGTCGGTTTCATGCTGCCCGAAGGGCGTATGGCCTTCAACGTGGCGATCCGTACCATCGAACTGC GAGGGCAGAGCGGTGTTTACGGTACGGGGAGCGGCATCGTCTGGGACTCCGACCCGCACGCGGAGTTTCGCGAATGTATG CTCAAGACGCGGATTCTCGCCGACCTCGTGCCGCCCTCCGATCCATCGGTTCCGGGCATTTTCGAGACGATGCAATGGAA CGGCGGGGAGTTCCTGCTGGCTGGCGACCATCTCGACCGGCTCGTTTCGTCCGCCATGGCGCTCGGATTTACGTTCGACC GCGCCGCTATCGCCGAGGCGCTGTCTGCCAAGGAACGCGAGTTGAGGAAAAACGGTGGCAGGCATCGCGTGCGGCTTACA CTTTCTCACGACGGTGGGATTTTGATAACTTCGGAGCCGTTCGATTTCGATGCATCCGGCAAGTCCGTCCGGGTCTGCAT TGCCGCCGAGCGGGTCGATTCGCGCGATCCGCTGCTTCGGCACAAGAGCGTCGCTCGCGAGCGGTACGATCGCGCCTTGC GCGAGGCGCGGGAGCGTGGATTCGGCGAAGTACTGTTTCTGAACGAGCGCAACGAAGTCACCGAAGGGGCGATCAGCAAT GTGCTCGCCCGCATCGACGGGCGCTGGCTGACGCCGCCGGAGTCGTGCGGACTGCTCAATGGTGTTTTCCGCCGCTACCT CCTGCGCTCGCGCCCGTGGATCGTCGAAAAAGCGTTTACCCTTGACGATCTGCACCGGGCCGATATGGTGTTCGTTTGCA ACTCACTGCGCGGCGTGCGCCCGGTGGCGATCGTCTTTCCGGAATAA
Upstream 100 bases:
>100_bases AGTCGATCACGGCCCGCATCGACCAGGAGCGCATCGTGCTCGAAGCGCTCACGCAGTTCGAGCCTGACATCGAACTCTGG GCGGCTTGCGGGCTAAAGGA
Downstream 100 bases:
>100_bases GCGCACCGGAGGTTGAAGCGCAACGGCTTGAGCTGTATATTGATGCTAGGACTCATCTTAAGCAACCGCTAACAGCTTTC CACCATGAGAGACCACACGC
Product: para-aminobenzoate synthetase, putative
Products: NA
Alternate protein names: P-aminobenzoic acid synthase; PABA synthase [H]
Number of amino acids: Translated: 628; Mature: 627
Protein sequence:
>628_residues MARRGARETHSDRSPRPVMALYEKLASPGSLWFESTLPGALYGDSLFFSDPLETLTLHAGDSVAPWFATLESRLDAGLCL AGWLSYEAGYLLDPALAALASAGADRELLGWFGVYGRPERVRRETVEAEDAAAAARSCAVSGFGFEFSEAEYCERIDRLR TEIAAGNVYQANFTGRCRFSFDGAVEALYVKMKRRQPSPWSAFLNTGDRQILSFSPELFFASDGRLIETMPMKGTAPRRE RPEEDLAEKAGLAKCEKNRAENLMIVDLLRNDLGRICATGSVQASGLFETQTYPTLHQMVSTVRGELRPATRLHDLFRAL FPSGSVTGAPKVRAMQLICELEKSLRGVYTGAVGFMLPEGRMAFNVAIRTIELRGQSGVYGTGSGIVWDSDPHAEFRECM LKTRILADLVPPSDPSVPGIFETMQWNGGEFLLAGDHLDRLVSSAMALGFTFDRAAIAEALSAKERELRKNGGRHRVRLT LSHDGGILITSEPFDFDASGKSVRVCIAAERVDSRDPLLRHKSVARERYDRALREARERGFGEVLFLNERNEVTEGAISN VLARIDGRWLTPPESCGLLNGVFRRYLLRSRPWIVEKAFTLDDLHRADMVFVCNSLRGVRPVAIVFPE
Sequences:
>Translated_628_residues MARRGARETHSDRSPRPVMALYEKLASPGSLWFESTLPGALYGDSLFFSDPLETLTLHAGDSVAPWFATLESRLDAGLCL AGWLSYEAGYLLDPALAALASAGADRELLGWFGVYGRPERVRRETVEAEDAAAAARSCAVSGFGFEFSEAEYCERIDRLR TEIAAGNVYQANFTGRCRFSFDGAVEALYVKMKRRQPSPWSAFLNTGDRQILSFSPELFFASDGRLIETMPMKGTAPRRE RPEEDLAEKAGLAKCEKNRAENLMIVDLLRNDLGRICATGSVQASGLFETQTYPTLHQMVSTVRGELRPATRLHDLFRAL FPSGSVTGAPKVRAMQLICELEKSLRGVYTGAVGFMLPEGRMAFNVAIRTIELRGQSGVYGTGSGIVWDSDPHAEFRECM LKTRILADLVPPSDPSVPGIFETMQWNGGEFLLAGDHLDRLVSSAMALGFTFDRAAIAEALSAKERELRKNGGRHRVRLT LSHDGGILITSEPFDFDASGKSVRVCIAAERVDSRDPLLRHKSVARERYDRALREARERGFGEVLFLNERNEVTEGAISN VLARIDGRWLTPPESCGLLNGVFRRYLLRSRPWIVEKAFTLDDLHRADMVFVCNSLRGVRPVAIVFPE >Mature_627_residues ARRGARETHSDRSPRPVMALYEKLASPGSLWFESTLPGALYGDSLFFSDPLETLTLHAGDSVAPWFATLESRLDAGLCLA GWLSYEAGYLLDPALAALASAGADRELLGWFGVYGRPERVRRETVEAEDAAAAARSCAVSGFGFEFSEAEYCERIDRLRT EIAAGNVYQANFTGRCRFSFDGAVEALYVKMKRRQPSPWSAFLNTGDRQILSFSPELFFASDGRLIETMPMKGTAPRRER PEEDLAEKAGLAKCEKNRAENLMIVDLLRNDLGRICATGSVQASGLFETQTYPTLHQMVSTVRGELRPATRLHDLFRALF PSGSVTGAPKVRAMQLICELEKSLRGVYTGAVGFMLPEGRMAFNVAIRTIELRGQSGVYGTGSGIVWDSDPHAEFRECML KTRILADLVPPSDPSVPGIFETMQWNGGEFLLAGDHLDRLVSSAMALGFTFDRAAIAEALSAKERELRKNGGRHRVRLTL SHDGGILITSEPFDFDASGKSVRVCIAAERVDSRDPLLRHKSVARERYDRALREARERGFGEVLFLNERNEVTEGAISNV LARIDGRWLTPPESCGLLNGVFRRYLLRSRPWIVEKAFTLDDLHRADMVFVCNSLRGVRPVAIVFPE
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=289, Percent_Identity=37.3702422145329, Blast_Score=199, Evalue=6e-52, Organism=Escherichia coli, GI1787518, Length=270, Percent_Identity=35.9259259259259, Blast_Score=138, Evalue=1e-33, Organism=Escherichia coli, GI1786809, Length=201, Percent_Identity=30.3482587064677, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=253, Percent_Identity=37.9446640316205, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6324361, Length=278, Percent_Identity=29.136690647482, Blast_Score=97, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR006805 - InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR015890 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR005802 - InterPro: IPR006221 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind; PF00117 GATase [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 69606; Mature: 69475
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRGARETHSDRSPRPVMALYEKLASPGSLWFESTLPGALYGDSLFFSDPLETLTLHAG CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEECCCHHHEEEECC DSVAPWFATLESRLDAGLCLAGWLSYEAGYLLDPALAALASAGADRELLGWFGVYGRPER CCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEECHHHHHHHHCCCCHHHHHHHCCCCCHHH VRRETVEAEDAAAAARSCAVSGFGFEFSEAEYCERIDRLRTEIAAGNVYQANFTGRCRFS HHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEE FDGAVEALYVKMKRRQPSPWSAFLNTGDRQILSFSPELFFASDGRLIETMPMKGTAPRRE CCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCEEEECCCCEEEECCCCCCCCCCC RPEEDLAEKAGLAKCEKNRAENLMIVDLLRNDLGRICATGSVQASGLFETQTYPTLHQMV CCHHHHHHHHCHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHH STVRGELRPATRLHDLFRALFPSGSVTGAPKVRAMQLICELEKSLRGVYTGAVGFMLPEG HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCC RMAFNVAIRTIELRGQSGVYGTGSGIVWDSDPHAEFRECMLKTRILADLVPPSDPSVPGI CEEEEEEEEEEEECCCCCCEECCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH FETMQWNGGEFLLAGDHLDRLVSSAMALGFTFDRAAIAEALSAKERELRKNGGRHRVRLT HHHHCCCCCEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE LSHDGGILITSEPFDFDASGKSVRVCIAAERVDSRDPLLRHKSVARERYDRALREARERG EECCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC FGEVLFLNERNEVTEGAISNVLARIDGRWLTPPESCGLLNGVFRRYLLRSRPWIVEKAFT CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC LDDLHRADMVFVCNSLRGVRPVAIVFPE HHHHHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure ARRGARETHSDRSPRPVMALYEKLASPGSLWFESTLPGALYGDSLFFSDPLETLTLHAG CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEECCCHHHEEEECC DSVAPWFATLESRLDAGLCLAGWLSYEAGYLLDPALAALASAGADRELLGWFGVYGRPER CCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEECHHHHHHHHCCCCHHHHHHHCCCCCHHH VRRETVEAEDAAAAARSCAVSGFGFEFSEAEYCERIDRLRTEIAAGNVYQANFTGRCRFS HHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEE FDGAVEALYVKMKRRQPSPWSAFLNTGDRQILSFSPELFFASDGRLIETMPMKGTAPRRE CCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCEEEECCCCEEEECCCCCCCCCCC RPEEDLAEKAGLAKCEKNRAENLMIVDLLRNDLGRICATGSVQASGLFETQTYPTLHQMV CCHHHHHHHHCHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHH STVRGELRPATRLHDLFRALFPSGSVTGAPKVRAMQLICELEKSLRGVYTGAVGFMLPEG HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCC RMAFNVAIRTIELRGQSGVYGTGSGIVWDSDPHAEFRECMLKTRILADLVPPSDPSVPGI CEEEEEEEEEEEECCCCCCEECCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH FETMQWNGGEFLLAGDHLDRLVSSAMALGFTFDRAAIAEALSAKERELRKNGGRHRVRLT HHHHCCCCCEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE LSHDGGILITSEPFDFDASGKSVRVCIAAERVDSRDPLLRHKSVARERYDRALREARERG EECCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC FGEVLFLNERNEVTEGAISNVLARIDGRWLTPPESCGLLNGVFRRYLLRSRPWIVEKAFT CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC LDDLHRADMVFVCNSLRGVRPVAIVFPE HHHHHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8472954 [H]