| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674525
Identifier: 21674525
GI number: 21674525
Start: 1620457
End: 1621158
Strand: Direct
Name: 21674525
Synonym: CT1708
Alternate gene names: NA
Gene position: 1620457-1621158 (Clockwise)
Preceding gene: 21674524
Following gene: 21674526
Centisome position: 75.2
GC content: 57.12
Gene sequence:
>702_bases ATGTCCCGCACACTTGTTCTGTTCGACATCGATGGAACCCTTTTGAAAGTCGAAAGCATGAACCGGCGCGTGCTGGCCGA CGCGCTCATCGAGGTGTACGGCACCGAAGGCAGCACCGGCAGTCACGACTTCTCCGGCAAAATGGACGGAGCAATCATCT ACGAAGTGCTCTCCAACGTCGGACTTGAACGTGCCGAAATTGCAGACAAGTTCGATAAAGCCAAGGAAACCTACATCGCA CTTTTCCGCGAACGCGCACGGCGTGAAGACATCACCCTGCTTGAAGGGGTTCGCGAACTGCTCGACGCGCTCTCGTCCCG TTCCGACGTTCTGCTCGGCCTGTTGACCGGCAACTTCGAGGCCTCCGGACGCCACAAACTCAAACTCCCCGGCATCGATC ACTACTTTCCGTTCGGCGCATTCGCCGACGATGCCCTCGACCGCAACGAACTTCCCCATATCGCGCTCGAACGGGCCCGG CGCATGACCGGAGCAAACTATTCCCCCTCGCAAATCGTTATTATCGGCGACACCGAACACGACATTCGTTGCGCGCGCGA ACTCGATGCCCGCTCGATCGCCGTAGCGACCGGCAATTTTACGATGGAGGAGCTGGCCCGGCACAAACCAGGAACGCTGT TCAAAAATTTTGCCGAGACCGATGAAGTTCTCGCCAGCATCCTTACACCAAAACACTCTTAA
Upstream 100 bases:
>100_bases GCCAGGCACTTTACGGCGTCACGATGGAAGAGGAAGGAGTCTCGAAACTCATTCCGGTCAAGATCGAAAACGCACGCTCT GAGGAAACAGCATCCTGATT
Downstream 100 bases:
>100_bases TTCCGCATCATGAAGACCTACCGACGGCAGCTCAGAGAAAAAATCATTCAGGCGCTTTACACGCTTGAACTCCGGGATGT CGATACCGATTCAGCGGCAA
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Phosphoglycolate Phosphatase; Haloacid Dehalogenase-Like Hydrolase; HAD Superfamily Hydrolase; HAD Family Hydrolase; Phosphatase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Domain Protein
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIA LFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERAR RMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASILTPKHS
Sequences:
>Translated_233_residues MSRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIA LFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERAR RMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASILTPKHS >Mature_232_residues SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIAL FRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARR MTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASILTPKHS
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25868; Mature: 25736
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNV CCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHC GLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC ASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEH CCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCH DIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASILTPKHS HHHHHHHCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNV CCEEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHC GLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC ASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEH CCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCH DIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASILTPKHS HHHHHHHCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA