| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674522
Identifier: 21674522
GI number: 21674522
Start: 1614844
End: 1615869
Strand: Direct
Name: 21674522
Synonym: CT1705
Alternate gene names: NA
Gene position: 1614844-1615869 (Clockwise)
Preceding gene: 21674521
Following gene: 21674523
Centisome position: 74.94
GC content: 58.87
Gene sequence:
>1026_bases ATGCCTGATTTTTCGTACGAAGAAACGAAGCTTACGACCGGCAGACACTATCCGATCCATCTTCTTCTTTTTGTCGCAAC CCTGTTCACCACAACCTGGGCCGGAGCGATCTGGACAGGTATCCCCCCTTTCACGGCAAACAAGGCCGGATTTATCGAAG CACTCAAAACGGGTGTACCGTTTTCGCTCGCCCTGCTCGCCTTCCTGACCGTGCACGAGTTCGGCCACTTTTTCGCCACC GTGAAACATCGAATCCGCGCCACGCTGCCCTACTACATTCCACTACCGCCGCTGCCATTTCTCATGAGCATCGGCACCCT TGGCGCGATCATCCGCATCAAGGAGCCGATCCGGAGCCGCCGGGCGCTCTTCGATATTGGCGCGGCGGGTCCACTCGCCG GATTCACCGTCGCGCTCGGTCTGCTCATCTACGGCTTCCTGCACCTGCCGCTTGCTGAGTACATCTATTCGGTCCATCCG GACTACCGGGCAATGGGTGGCATTCCGCCCGCGCCAGCAGACACATTGTATCTCGGCAAAAATCTGCTCTTCATCCTGCT CGATGCACTGATCCAGCCGAAGGGACTGCCGCCGATGTATGAACTCTACCACTACCCGTTTCTTTTCGCCGGATGGCTCG CCTGTTTCGTCACTGCACTGAACCTCCTGCCCGTCGGCCAGCTCGATGGCGGGCACGTCATCTACGCCATGTTCGGCAGC GAGGGACACCGGAAAATCTCGAAGTTCTTCCTCGCGTTTATCACCGTCATCGGCGCGCCGTCGTTCATCCTCGGCGTACT CGAACTGATCAATCCGGCACTTGTTTTTCCTGTGCCGGAACTGCTGCTCCGCTGGTCATGGCCAGGCTGGATCATCTGGG CCATCATCCTTCGCCGCTTCCTCGGCACGAAGCACCCACAGGCGGGCAGCGACCATCCCTTGCCACCGGGACGGATGACT GCCGGATGGCTCTGCATCGCCGTTTTCATCCTGACCTTCACGCCGGTGCCATTCGCAATCAGTTGA
Upstream 100 bases:
>100_bases CCGGGTTGCGTGACGGTAACCCGGCATGCACGCTCCGGAGGCAATAATCCGGAAGCTTGTGCTATTTGCAAAATGACAAG GGCGTCAACCCCTATGACCA
Downstream 100 bases:
>100_bases GCTTTTCGTGATGAAACAGAATCTTGGGGATCAAAGCCGTTACCGTCTGAACTGCGCTGGTGCAATGCTCGACCTCTCGG CGCGTCCGGCCATCATGGGC
Product: zinc protease, putative
Products: NA
Alternate protein names: Peptidase; Membrane-Associated Zn-Dependent Protease; M50 Family Peptidase; Metalloprotease; Zinc Protease; Membrane-Associated Metallopeptidase; Zinc Metalloprotease; M50 Family Metallopeptidase; M50B Family Peptidase; Peptidase Family; Membrane Associated Metalloprotease; S2P Family Metalloprotease; Integral Membrane Protease
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPDFSYEETKLTTGRHYPIHLLLFVATLFTTTWAGAIWTGIPPFTANKAGFIEALKTGVPFSLALLAFLTVHEFGHFFAT VKHRIRATLPYYIPLPPLPFLMSIGTLGAIIRIKEPIRSRRALFDIGAAGPLAGFTVALGLLIYGFLHLPLAEYIYSVHP DYRAMGGIPPAPADTLYLGKNLLFILLDALIQPKGLPPMYELYHYPFLFAGWLACFVTALNLLPVGQLDGGHVIYAMFGS EGHRKISKFFLAFITVIGAPSFILGVLELINPALVFPVPELLLRWSWPGWIIWAIILRRFLGTKHPQAGSDHPLPPGRMT AGWLCIAVFILTFTPVPFAIS
Sequences:
>Translated_341_residues MPDFSYEETKLTTGRHYPIHLLLFVATLFTTTWAGAIWTGIPPFTANKAGFIEALKTGVPFSLALLAFLTVHEFGHFFAT VKHRIRATLPYYIPLPPLPFLMSIGTLGAIIRIKEPIRSRRALFDIGAAGPLAGFTVALGLLIYGFLHLPLAEYIYSVHP DYRAMGGIPPAPADTLYLGKNLLFILLDALIQPKGLPPMYELYHYPFLFAGWLACFVTALNLLPVGQLDGGHVIYAMFGS EGHRKISKFFLAFITVIGAPSFILGVLELINPALVFPVPELLLRWSWPGWIIWAIILRRFLGTKHPQAGSDHPLPPGRMT AGWLCIAVFILTFTPVPFAIS >Mature_340_residues PDFSYEETKLTTGRHYPIHLLLFVATLFTTTWAGAIWTGIPPFTANKAGFIEALKTGVPFSLALLAFLTVHEFGHFFATV KHRIRATLPYYIPLPPLPFLMSIGTLGAIIRIKEPIRSRRALFDIGAAGPLAGFTVALGLLIYGFLHLPLAEYIYSVHPD YRAMGGIPPAPADTLYLGKNLLFILLDALIQPKGLPPMYELYHYPFLFAGWLACFVTALNLLPVGQLDGGHVIYAMFGSE GHRKISKFFLAFITVIGAPSFILGVLELINPALVFPVPELLLRWSWPGWIIWAIILRRFLGTKHPQAGSDHPLPPGRMTA GWLCIAVFILTFTPVPFAIS
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37736; Mature: 37605
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFSYEETKLTTGRHYPIHLLLFVATLFTTTWAGAIWTGIPPFTANKAGFIEALKTGVP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC FSLALLAFLTVHEFGHFFATVKHRIRATLPYYIPLPPLPFLMSIGTLGAIIRIKEPIRSR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH RALFDIGAAGPLAGFTVALGLLIYGFLHLPLAEYIYSVHPDYRAMGGIPPAPADTLYLGK HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHH NLLFILLDALIQPKGLPPMYELYHYPFLFAGWLACFVTALNLLPVGQLDGGHVIYAMFGS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC EGHRKISKFFLAFITVIGAPSFILGVLELINPALVFPVPELLLRWSWPGWIIWAIILRRF CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCHHHHHHHCCCCHHHHHHHHHHHH LGTKHPQAGSDHPLPPGRMTAGWLCIAVFILTFTPVPFAIS HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PDFSYEETKLTTGRHYPIHLLLFVATLFTTTWAGAIWTGIPPFTANKAGFIEALKTGVP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC FSLALLAFLTVHEFGHFFATVKHRIRATLPYYIPLPPLPFLMSIGTLGAIIRIKEPIRSR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH RALFDIGAAGPLAGFTVALGLLIYGFLHLPLAEYIYSVHPDYRAMGGIPPAPADTLYLGK HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHH NLLFILLDALIQPKGLPPMYELYHYPFLFAGWLACFVTALNLLPVGQLDGGHVIYAMFGS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC EGHRKISKFFLAFITVIGAPSFILGVLELINPALVFPVPELLLRWSWPGWIIWAIILRRF CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCHHHHHHHCCCCHHHHHHHHHHHH LGTKHPQAGSDHPLPPGRMTAGWLCIAVFILTFTPVPFAIS HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA