| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is ygfS [C]
Identifier: 21674518
GI number: 21674518
Start: 1611699
End: 1612577
Strand: Reverse
Name: ygfS [C]
Synonym: CT1701
Alternate gene names: 21674518
Gene position: 1612577-1611699 (Counterclockwise)
Preceding gene: 21674519
Following gene: 21674517
Centisome position: 74.83
GC content: 62.8
Gene sequence:
>879_bases ATGAAACGGCAGATCATAACCATAGATGAGAAAAAATGCACCGGCTGCGGCGATTGCATTCCGGCGTGCCCGGAAGGGGC GCTTCAGGTGATCGACGGCAAGGCGCGGCTGGTGAGTGACCTGTTCTGCGACGGCCTCGGCGCCTGCATCGGGCACTGCC CGACCGGTGCGATGCAGGTCGAGACCCGCGAAGCCGAGCCTTATGACGAGCGCCGCGTGATGGCCGAGAGCATCGTGAAG GCCGGGCCGAACGTGATTGCAGCACATCTGTGCCACCTGCGCGATCATGGCGCCAATGATTACCTGCGTGAAGCGCTGGC ATATCTCGAAGAGCAGGGGATTCCGAACCCGCTTGAGCAGCCCGTTGCCGCCGCCCATCCTGCACATGTGCAGCACGGTG GCGGATGCCCCGGCAGCCGCACGATGGATTTCCGTTCATCGAACGGGAGTGCGCAAGCATCATCGGTAGCGCCCGTTGCT GGTGCGGTTCACGCGCTCAGCGAACTTCGCCAGTGGCCGGTGCAGTTGCATCTGGTTTCGCCGATCGCGCCCTGCTTCGA GGGTTCCGACCTGCTTCTCGCTGCCGACTGCGTGGCATTCGCGGCAGGCGATTTTCACAGCAGGCTTCTGCGCGGCAAGA CACTCGCGGTCGCCTGCCCGAAGCTTGACAGCGGCCTCGCTGTTTACGTGGAGAAGCTCGCAGCCATGATCGATCATGCG CGCATCAACACCATCACCGTGGCGATCATGGAGGTGCCGTGCTGCGGCGGCTTGCTTTCGATTGTCGAGGAGGCGTCGCG GAGAGCCTCGCGCAAGGTTCCGGTCAAAAAGATTGTTATCGGCGTGCAGGGTGACACCCTGAGCGAGGAGTGGATGTGA
Upstream 100 bases:
>100_bases ATAACGAGTTCTCGCAAGTGACCATTGGCAAGCTGATCGACGATCTGAAGGCGGTGGAAGCGATGAATAAAACCAGACAG ACAGAACAACAGGAAGCACG
Downstream 100 bases:
>100_bases GATGCTGAAGGACGCACTTGGGGAGTGGCGCGGCTCCGAGGAGGAGATCACCCGTCAGATCGAGGCCGATCCGGTCAACG CACAGGCCTGGGCCAGCCGG
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKRQIITIDEKKCTGCGDCIPACPEGALQVIDGKARLVSDLFCDGLGACIGHCPTGAMQVETREAEPYDERRVMAESIVK AGPNVIAAHLCHLRDHGANDYLREALAYLEEQGIPNPLEQPVAAAHPAHVQHGGGCPGSRTMDFRSSNGSAQASSVAPVA GAVHALSELRQWPVQLHLVSPIAPCFEGSDLLLAADCVAFAAGDFHSRLLRGKTLAVACPKLDSGLAVYVEKLAAMIDHA RINTITVAIMEVPCCGGLLSIVEEASRRASRKVPVKKIVIGVQGDTLSEEWM
Sequences:
>Translated_292_residues MKRQIITIDEKKCTGCGDCIPACPEGALQVIDGKARLVSDLFCDGLGACIGHCPTGAMQVETREAEPYDERRVMAESIVK AGPNVIAAHLCHLRDHGANDYLREALAYLEEQGIPNPLEQPVAAAHPAHVQHGGGCPGSRTMDFRSSNGSAQASSVAPVA GAVHALSELRQWPVQLHLVSPIAPCFEGSDLLLAADCVAFAAGDFHSRLLRGKTLAVACPKLDSGLAVYVEKLAAMIDHA RINTITVAIMEVPCCGGLLSIVEEASRRASRKVPVKKIVIGVQGDTLSEEWM >Mature_292_residues MKRQIITIDEKKCTGCGDCIPACPEGALQVIDGKARLVSDLFCDGLGACIGHCPTGAMQVETREAEPYDERRVMAESIVK AGPNVIAAHLCHLRDHGANDYLREALAYLEEQGIPNPLEQPVAAAHPAHVQHGGGCPGSRTMDFRSSNGSAQASSVAPVA GAVHALSELRQWPVQLHLVSPIAPCFEGSDLLLAADCVAFAAGDFHSRLLRGKTLAVACPKLDSGLAVYVEKLAAMIDHA RINTITVAIMEVPCCGGLLSIVEEASRRASRKVPVKKIVIGVQGDTLSEEWM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31004; Mature: 31004
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRQIITIDEKKCTGCGDCIPACPEGALQVIDGKARLVSDLFCDGLGACIGHCPTGAMQV CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEE ETREAEPYDERRVMAESIVKAGPNVIAAHLCHLRDHGANDYLREALAYLEEQGIPNPLEQ ECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHC PVAAAHPAHVQHGGGCPGSRTMDFRSSNGSAQASSVAPVAGAVHALSELRQWPVQLHLVS CHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEC PIAPCFEGSDLLLAADCVAFAAGDFHSRLLRGKTLAVACPKLDSGLAVYVEKLAAMIDHA CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHH RINTITVAIMEVPCCGGLLSIVEEASRRASRKVPVKKIVIGVQGDTLSEEWM HHHEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCC >Mature Secondary Structure MKRQIITIDEKKCTGCGDCIPACPEGALQVIDGKARLVSDLFCDGLGACIGHCPTGAMQV CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEE ETREAEPYDERRVMAESIVKAGPNVIAAHLCHLRDHGANDYLREALAYLEEQGIPNPLEQ ECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHC PVAAAHPAHVQHGGGCPGSRTMDFRSSNGSAQASSVAPVAGAVHALSELRQWPVQLHLVS CHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEC PIAPCFEGSDLLLAADCVAFAAGDFHSRLLRGKTLAVACPKLDSGLAVYVEKLAAMIDHA CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHH RINTITVAIMEVPCCGGLLSIVEEASRRASRKVPVKKIVIGVQGDTLSEEWM HHHEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]