Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is ygfS [C]

Identifier: 21674518

GI number: 21674518

Start: 1611699

End: 1612577

Strand: Reverse

Name: ygfS [C]

Synonym: CT1701

Alternate gene names: 21674518

Gene position: 1612577-1611699 (Counterclockwise)

Preceding gene: 21674519

Following gene: 21674517

Centisome position: 74.83

GC content: 62.8

Gene sequence:

>879_bases
ATGAAACGGCAGATCATAACCATAGATGAGAAAAAATGCACCGGCTGCGGCGATTGCATTCCGGCGTGCCCGGAAGGGGC
GCTTCAGGTGATCGACGGCAAGGCGCGGCTGGTGAGTGACCTGTTCTGCGACGGCCTCGGCGCCTGCATCGGGCACTGCC
CGACCGGTGCGATGCAGGTCGAGACCCGCGAAGCCGAGCCTTATGACGAGCGCCGCGTGATGGCCGAGAGCATCGTGAAG
GCCGGGCCGAACGTGATTGCAGCACATCTGTGCCACCTGCGCGATCATGGCGCCAATGATTACCTGCGTGAAGCGCTGGC
ATATCTCGAAGAGCAGGGGATTCCGAACCCGCTTGAGCAGCCCGTTGCCGCCGCCCATCCTGCACATGTGCAGCACGGTG
GCGGATGCCCCGGCAGCCGCACGATGGATTTCCGTTCATCGAACGGGAGTGCGCAAGCATCATCGGTAGCGCCCGTTGCT
GGTGCGGTTCACGCGCTCAGCGAACTTCGCCAGTGGCCGGTGCAGTTGCATCTGGTTTCGCCGATCGCGCCCTGCTTCGA
GGGTTCCGACCTGCTTCTCGCTGCCGACTGCGTGGCATTCGCGGCAGGCGATTTTCACAGCAGGCTTCTGCGCGGCAAGA
CACTCGCGGTCGCCTGCCCGAAGCTTGACAGCGGCCTCGCTGTTTACGTGGAGAAGCTCGCAGCCATGATCGATCATGCG
CGCATCAACACCATCACCGTGGCGATCATGGAGGTGCCGTGCTGCGGCGGCTTGCTTTCGATTGTCGAGGAGGCGTCGCG
GAGAGCCTCGCGCAAGGTTCCGGTCAAAAAGATTGTTATCGGCGTGCAGGGTGACACCCTGAGCGAGGAGTGGATGTGA

Upstream 100 bases:

>100_bases
ATAACGAGTTCTCGCAAGTGACCATTGGCAAGCTGATCGACGATCTGAAGGCGGTGGAAGCGATGAATAAAACCAGACAG
ACAGAACAACAGGAAGCACG

Downstream 100 bases:

>100_bases
GATGCTGAAGGACGCACTTGGGGAGTGGCGCGGCTCCGAGGAGGAGATCACCCGTCAGATCGAGGCCGATCCGGTCAACG
CACAGGCCTGGGCCAGCCGG

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKRQIITIDEKKCTGCGDCIPACPEGALQVIDGKARLVSDLFCDGLGACIGHCPTGAMQVETREAEPYDERRVMAESIVK
AGPNVIAAHLCHLRDHGANDYLREALAYLEEQGIPNPLEQPVAAAHPAHVQHGGGCPGSRTMDFRSSNGSAQASSVAPVA
GAVHALSELRQWPVQLHLVSPIAPCFEGSDLLLAADCVAFAAGDFHSRLLRGKTLAVACPKLDSGLAVYVEKLAAMIDHA
RINTITVAIMEVPCCGGLLSIVEEASRRASRKVPVKKIVIGVQGDTLSEEWM

Sequences:

>Translated_292_residues
MKRQIITIDEKKCTGCGDCIPACPEGALQVIDGKARLVSDLFCDGLGACIGHCPTGAMQVETREAEPYDERRVMAESIVK
AGPNVIAAHLCHLRDHGANDYLREALAYLEEQGIPNPLEQPVAAAHPAHVQHGGGCPGSRTMDFRSSNGSAQASSVAPVA
GAVHALSELRQWPVQLHLVSPIAPCFEGSDLLLAADCVAFAAGDFHSRLLRGKTLAVACPKLDSGLAVYVEKLAAMIDHA
RINTITVAIMEVPCCGGLLSIVEEASRRASRKVPVKKIVIGVQGDTLSEEWM
>Mature_292_residues
MKRQIITIDEKKCTGCGDCIPACPEGALQVIDGKARLVSDLFCDGLGACIGHCPTGAMQVETREAEPYDERRVMAESIVK
AGPNVIAAHLCHLRDHGANDYLREALAYLEEQGIPNPLEQPVAAAHPAHVQHGGGCPGSRTMDFRSSNGSAQASSVAPVA
GAVHALSELRQWPVQLHLVSPIAPCFEGSDLLLAADCVAFAAGDFHSRLLRGKTLAVACPKLDSGLAVYVEKLAAMIDHA
RINTITVAIMEVPCCGGLLSIVEEASRRASRKVPVKKIVIGVQGDTLSEEWM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31004; Mature: 31004

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQIITIDEKKCTGCGDCIPACPEGALQVIDGKARLVSDLFCDGLGACIGHCPTGAMQV
CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
ETREAEPYDERRVMAESIVKAGPNVIAAHLCHLRDHGANDYLREALAYLEEQGIPNPLEQ
ECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHC
PVAAAHPAHVQHGGGCPGSRTMDFRSSNGSAQASSVAPVAGAVHALSELRQWPVQLHLVS
CHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEC
PIAPCFEGSDLLLAADCVAFAAGDFHSRLLRGKTLAVACPKLDSGLAVYVEKLAAMIDHA
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
RINTITVAIMEVPCCGGLLSIVEEASRRASRKVPVKKIVIGVQGDTLSEEWM
HHHEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCC
>Mature Secondary Structure
MKRQIITIDEKKCTGCGDCIPACPEGALQVIDGKARLVSDLFCDGLGACIGHCPTGAMQV
CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
ETREAEPYDERRVMAESIVKAGPNVIAAHLCHLRDHGANDYLREALAYLEEQGIPNPLEQ
ECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHC
PVAAAHPAHVQHGGGCPGSRTMDFRSSNGSAQASSVAPVAGAVHALSELRQWPVQLHLVS
CHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEC
PIAPCFEGSDLLLAADCVAFAAGDFHSRLLRGKTLAVACPKLDSGLAVYVEKLAAMIDHA
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
RINTITVAIMEVPCCGGLLSIVEEASRRASRKVPVKKIVIGVQGDTLSEEWM
HHHEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]