| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674515
Identifier: 21674515
GI number: 21674515
Start: 1607281
End: 1609089
Strand: Reverse
Name: 21674515
Synonym: CT1697
Alternate gene names: NA
Gene position: 1609089-1607281 (Counterclockwise)
Preceding gene: 21674516
Following gene: 21674514
Centisome position: 74.67
GC content: 59.65
Gene sequence:
>1809_bases ATGGCGTATTACAAGAATATCTGCTTTGTCGAGGCTCCGCAGGCGATGGTTACGCCGTTTCCGAGGTATATCAGCGATTG CATCGGTGTCTGCTATCTTGCTGCTGCCGTGGAGGATATCGTCGAGAGCATGGCGATGCCGGAGAACTATTATAACGACG GGATTTTCGAAAGCTTCGAGAAGTTGCTGAAGTCGCGCCCGTTCGACCTCGTTGCCATCTCGTCTATGACCGGCGGTTTC AACAATGCGGAGCGGCTGGCGCGGATTGCCAAAAAGCACGGTGTGACGGTGGTGATGGGCGGGTTCCATCCGACCGCGCT ACCCGAACAGGTGCTCGATCTCGGTTGCGTCGATCTGGTGGTGATCGGCGAGGGCGAGGCGACCTTCCGGGAGCTGGTCG AAAAAGGGCCGTCGCGCGATGTAAAAGGCCTCTGCTGGAAGGAGAACGGCGTGTTCGTTCATACCGGCATCCGCGAACTT ATCAAGGATGTGGATTCGATCCGGTTTCCGCTTCGTTCGCTCCGCCCGAAGCGGTTCGGAGAGACGAGCGAAAACTACAC CATCGACACCATCTACACCTCGCGCGGCTGCCCCTGGACGTGTTCGTTCTGCGCGAACGACAAGATGCACAAGCACTGGC GGGGCCGGAGCGCCGAGAATGTCGTCGATGAGATCGCCCAATTGCACGACCGCAAAAAGAAGAAGCTGCTCAAGATCTGG GACGCGAACTTCCTGACCAACATCAGGCGCGTCGAGAAGATCTGCGACCTGATGATCGAGCGCGGGCTGACCAACTTCCG GATTGTCACTGAGACGCGGGCCAAGGATGTGATCCGCGCCGAGCGCATTCTGCCGAAGCTGCGCAAGATCGGGCTGAGCA AGGTGGGTCTCGGCATCGAGAGCCCGAACCCGAAGACGCTCGAACTGATGAACAAGGAGAACTCGCTCGCCGAGGTGACG ACCGCGATTAATCTCCTGAACCAGTACGGCGTTGGCTCCGAGGGGTACTTTATCATCGGCCACTATTCGGAGAGCGTCGA GGACACGATGCCCTACCCGAAATTTGCCCGTGCGCTCGGCCTGCGCCAGACGCTCTTTATGGCGATGACCCCCTATCCCG GCACCCGGATTTTTGACGAGTACGCCCGTGAGAACAACGTCACCTCGTTCGACTGGGATTTGTACAACAACTTCGTGCCG GTGATCCGCACGGCGCACATGGAGAACCGCGACATCATGCGCATGATGGTCTACGGCAACGTGGCCTTCTGCGACTACCG CTCCGTGCTCAAGCGTGACGACAATCGTGGCGTGCTGTTGACGTTTCTGAAGGACCTGTTCCAGCTCGTGTTCCTGCTGA AGGTCAACAAAACGCTTGACCGCAAGGAGGCTTCGCAGATCGTTTTCGAGGCGTTCGAACTCTGGCTTGGCACCAATCCG GCGCTCGATTACACCAGAACGCCGCCCCCGCCGCCGCTCAAGGAGTCGACCGGCGTCTGCCTCGAGCACGCGGCATCCGG CAAGCGGATCGACTTCGTCGTCGAGCAGGCGGGCGACCGGCGGGTGCTGAAGCTGCGCAAGGTCGCCGCGAGCGAGCCAG CCCCGTTTCCGGCCGTAAGCCTTGACGAGGTGGTCGATGCTGCTTTTTCGCTTTCGATGGACGCGCTCATGCGTCTGCTC TACCGCAACGAACTGATGCGTAACAACCCGCGCCTGACGCCACGCCAAGTGCTCGCGCTCTTCGCCGATCGTGATATCCG CCAAGTGGCGATGCGATTCTGGCGGCTGTATCGGGGGTGTTTCAAGTGA
Upstream 100 bases:
>100_bases CTTCTAGCAGAGTGTAGGCCTAATCTTCAGGGTTAGCTTATCGCATCGTTATCCTTCCATATCTCCTTGATCTGAACCCA ACCCGGAGCGCTGCCACCGT
Downstream 100 bases:
>100_bases CTATCAACGATGTAACGAATTTTTATGATCGAAGCCATTCTGTGGGATAATGATGGATTGCTCGTGGACAGTGAGTCGCT GTTTTTCGAGATGACCCGGA
Product: BchE/P-methylase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MAYYKNICFVEAPQAMVTPFPRYISDCIGVCYLAAAVEDIVESMAMPENYYNDGIFESFEKLLKSRPFDLVAISSMTGGF NNAERLARIAKKHGVTVVMGGFHPTALPEQVLDLGCVDLVVIGEGEATFRELVEKGPSRDVKGLCWKENGVFVHTGIREL IKDVDSIRFPLRSLRPKRFGETSENYTIDTIYTSRGCPWTCSFCANDKMHKHWRGRSAENVVDEIAQLHDRKKKKLLKIW DANFLTNIRRVEKICDLMIERGLTNFRIVTETRAKDVIRAERILPKLRKIGLSKVGLGIESPNPKTLELMNKENSLAEVT TAINLLNQYGVGSEGYFIIGHYSESVEDTMPYPKFARALGLRQTLFMAMTPYPGTRIFDEYARENNVTSFDWDLYNNFVP VIRTAHMENRDIMRMMVYGNVAFCDYRSVLKRDDNRGVLLTFLKDLFQLVFLLKVNKTLDRKEASQIVFEAFELWLGTNP ALDYTRTPPPPPLKESTGVCLEHAASGKRIDFVVEQAGDRRVLKLRKVAASEPAPFPAVSLDEVVDAAFSLSMDALMRLL YRNELMRNNPRLTPRQVLALFADRDIRQVAMRFWRLYRGCFK
Sequences:
>Translated_602_residues MAYYKNICFVEAPQAMVTPFPRYISDCIGVCYLAAAVEDIVESMAMPENYYNDGIFESFEKLLKSRPFDLVAISSMTGGF NNAERLARIAKKHGVTVVMGGFHPTALPEQVLDLGCVDLVVIGEGEATFRELVEKGPSRDVKGLCWKENGVFVHTGIREL IKDVDSIRFPLRSLRPKRFGETSENYTIDTIYTSRGCPWTCSFCANDKMHKHWRGRSAENVVDEIAQLHDRKKKKLLKIW DANFLTNIRRVEKICDLMIERGLTNFRIVTETRAKDVIRAERILPKLRKIGLSKVGLGIESPNPKTLELMNKENSLAEVT TAINLLNQYGVGSEGYFIIGHYSESVEDTMPYPKFARALGLRQTLFMAMTPYPGTRIFDEYARENNVTSFDWDLYNNFVP VIRTAHMENRDIMRMMVYGNVAFCDYRSVLKRDDNRGVLLTFLKDLFQLVFLLKVNKTLDRKEASQIVFEAFELWLGTNP ALDYTRTPPPPPLKESTGVCLEHAASGKRIDFVVEQAGDRRVLKLRKVAASEPAPFPAVSLDEVVDAAFSLSMDALMRLL YRNELMRNNPRLTPRQVLALFADRDIRQVAMRFWRLYRGCFK >Mature_601_residues AYYKNICFVEAPQAMVTPFPRYISDCIGVCYLAAAVEDIVESMAMPENYYNDGIFESFEKLLKSRPFDLVAISSMTGGFN NAERLARIAKKHGVTVVMGGFHPTALPEQVLDLGCVDLVVIGEGEATFRELVEKGPSRDVKGLCWKENGVFVHTGIRELI KDVDSIRFPLRSLRPKRFGETSENYTIDTIYTSRGCPWTCSFCANDKMHKHWRGRSAENVVDEIAQLHDRKKKKLLKIWD ANFLTNIRRVEKICDLMIERGLTNFRIVTETRAKDVIRAERILPKLRKIGLSKVGLGIESPNPKTLELMNKENSLAEVTT AINLLNQYGVGSEGYFIIGHYSESVEDTMPYPKFARALGLRQTLFMAMTPYPGTRIFDEYARENNVTSFDWDLYNNFVPV IRTAHMENRDIMRMMVYGNVAFCDYRSVLKRDDNRGVLLTFLKDLFQLVFLLKVNKTLDRKEASQIVFEAFELWLGTNPA LDYTRTPPPPPLKESTGVCLEHAASGKRIDFVVEQAGDRRVLKLRKVAASEPAPFPAVSLDEVVDAAFSLSMDALMRLLY RNELMRNNPRLTPRQVLALFADRDIRQVAMRFWRLYRGCFK
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 68767; Mature: 68635
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYYKNICFVEAPQAMVTPFPRYISDCIGVCYLAAAVEDIVESMAMPENYYNDGIFESFE CCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHH KLLKSRPFDLVAISSMTGGFNNAERLARIAKKHGVTVVMGGFHPTALPEQVLDLGCVDLV HHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCEEEE VIGEGEATFRELVEKGPSRDVKGLCWKENGVFVHTGIRELIKDVDSIRFPLRSLRPKRFG EECCCCHHHHHHHHCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCC ETSENYTIDTIYTSRGCPWTCSFCANDKMHKHWRGRSAENVVDEIAQLHDRKKKKLLKIW CCCCCEEEEEEEECCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DANFLTNIRRVEKICDLMIERGLTNFRIVTETRAKDVIRAERILPKLRKIGLSKVGLGIE HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC SPNPKTLELMNKENSLAEVTTAINLLNQYGVGSEGYFIIGHYSESVEDTMPYPKFARALG CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCCCHHHHHHHH LRQTLFMAMTPYPGTRIFDEYARENNVTSFDWDLYNNFVPVIRTAHMENRDIMRMMVYGN HHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEHHHHHCCHHHHHHHCCCCHHHHHHHHHCC VAFCDYRSVLKRDDNRGVLLTFLKDLFQLVFLLKVNKTLDRKEASQIVFEAFELWLGTNP CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ALDYTRTPPPPPLKESTGVCLEHAASGKRIDFVVEQAGDRRVLKLRKVAASEPAPFPAVS CCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC LDEVVDAAFSLSMDALMRLLYRNELMRNNPRLTPRQVLALFADRDIRQVAMRFWRLYRGC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH FK CC >Mature Secondary Structure AYYKNICFVEAPQAMVTPFPRYISDCIGVCYLAAAVEDIVESMAMPENYYNDGIFESFE CCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHH KLLKSRPFDLVAISSMTGGFNNAERLARIAKKHGVTVVMGGFHPTALPEQVLDLGCVDLV HHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCEEEE VIGEGEATFRELVEKGPSRDVKGLCWKENGVFVHTGIRELIKDVDSIRFPLRSLRPKRFG EECCCCHHHHHHHHCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCC ETSENYTIDTIYTSRGCPWTCSFCANDKMHKHWRGRSAENVVDEIAQLHDRKKKKLLKIW CCCCCEEEEEEEECCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DANFLTNIRRVEKICDLMIERGLTNFRIVTETRAKDVIRAERILPKLRKIGLSKVGLGIE HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC SPNPKTLELMNKENSLAEVTTAINLLNQYGVGSEGYFIIGHYSESVEDTMPYPKFARALG CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCCCHHHHHHHH LRQTLFMAMTPYPGTRIFDEYARENNVTSFDWDLYNNFVPVIRTAHMENRDIMRMMVYGN HHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEHHHHHCCHHHHHHHCCCCHHHHHHHHHCC VAFCDYRSVLKRDDNRGVLLTFLKDLFQLVFLLKVNKTLDRKEASQIVFEAFELWLGTNP CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ALDYTRTPPPPPLKESTGVCLEHAASGKRIDFVVEQAGDRRVLKLRKVAASEPAPFPAVS CCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC LDEVVDAAFSLSMDALMRLLYRNELMRNNPRLTPRQVLALFADRDIRQVAMRFWRLYRGC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH FK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]