| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is zraS [C]
Identifier: 21674513
GI number: 21674513
Start: 1604950
End: 1606587
Strand: Direct
Name: zraS [C]
Synonym: CT1695
Alternate gene names: 21674513
Gene position: 1604950-1606587 (Clockwise)
Preceding gene: 21674512
Following gene: 21674521
Centisome position: 74.48
GC content: 55.01
Gene sequence:
>1638_bases ATGCCAACCCCTTTATTCGATACCTGTCTCTCTTCAGATGACCTGAACGCTTTTGATGCCAGCCAGAAACCCGGAACAAC AACGTTCAACACCCTGGCGTCGCTCACTGAACTTTATGACGCTATTCCAGCCTCAATCATCATCATCGATGAACGGATGC GCCTGATCGGCTGGAACCGCTTTTCGCGCGACACCATCAACGGGCTGAGTGACAACGAAATGCCGGGTATCAACCCGATG AAGCGTGTGCACCCCGATGACCTCCCCGAAATGATCCGGAAAATGCGTAACGTCATCGACCTCGACATCGAACTGAGCGC CGAGTTCAGAATGTATCACAAAAGCGGGCCGCCCTACAAATGGGCGATGTGCCGGGGTAAACGGACCATCATTGAGGGGA AAACCTGCGTGGTGGCAGTCGTGACTGAAATCACCGATCTCAAGGAGGCTGAAGAGCAGCGCAAAAAGCTTCAGGAACAG CTCTTGCAGCTTCAGAAAATGGAGCTCGTCGGCCAGCTTGCCAGCGGCATCGCACACGATTTCAACAACGCGCTTGCAGC CATCATTGGCAACACGGAACTGGCGCTCAAAAAGCTCGACCCGGCCAACCCGGCCGTATCGAATATCACGGATATTCACA CGCTTGCGACACGCTCGGCGAATCTTACCCGCCAGTTGCTCGCCTTTGCGCGCAAGCAGATGGCAATGCCTCGGGTGCTC AACCTGACCGAAGAGGTTTCGGACTGCCTTCGCCTGTACCAGCGGCTCATCGACAAGAACATCCATCTCGAATGGCATCT ATGCGACGAGCCGATCCAGGTAAAGCTCGACCCCACGCAGCTCGAACAGATTCTCTCCAACCTGCTCGTCAACGCACGTG ACGCCATCGATGGCAGTGGATGCATCACGGTCAGATGCGAAGGCGCACGATTCGAGCCGACCGACGGCAAAACCTGCAAT CCCAGGCTCTCACCAGGGGATTATGCAAGACTGTCGATCACCGATAGCGGCTGCGGCATTGAAGCCTCCGTCTTGCCCCA CATCTACGAACCGTTCTTCACCACCAAGGAGATCGGCAAAGGCATCGGACTCGGCCTTTCGTCGGTCTATGGCATCGTGA GGCAGAACAACGGTCATATCGAGTGCCATTCCGAACCCGGCAAGGGGACGACCTTCGATATCTGGCTCCCCCTGCATCAG GAATCGCAACAGAAAACGGACGTCCATGCTGACAAACCGCAAACTGAACTAAAGACAAAAGCGAAGATCATGGTGGTCGA GGACGAGCCCTACATCCTCAAACTGGTGCAGGATATTCTCGAAAGCCATGAATTCACGGTCTTCACGGCAACTGACGCTG ACCAGTGCCTGCTCGCCGCCAAAACCCACGAGTACCGGATCGATCTGCTTGTAACCGACGTGGTACTGCCGACGATGAAC GGCATCGAGCAGAGCCGGGTGCTCCAAAAGAAAAATCCGGCCATGAAATGCCTGTTCATGTCAGCCCACGCTCCGGATAA CGTCGATGGTCAGAAAAAGCTCAGGGTTGGAGTGGATTTTATCGAGAAGCCGTTCGGCATCGACGAGTTTCTCCGTGCGA TCGACCAGGTGCTGAACAGTGAGGTCGAAAAAATTTGA
Upstream 100 bases:
>100_bases GATCGGAAAACAAGCGCCATCGGTAATCACAATGCAATGAAAACCATTTATCAACAAGTGGCATCAATCTATCTCAATAT CTGAAAATCTGCGCATATCG
Downstream 100 bases:
>100_bases GGAGAACCGGACTCAGCGTGCCAGACGCTTGGTGGCGTTGACATGCTTCAGCACACCTGAAACATCCGCTTCCACCGCAT GAGCACGGTCAAAGCGCTGC
Product: sensor histidine kinase/response regulator
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MPTPLFDTCLSSDDLNAFDASQKPGTTTFNTLASLTELYDAIPASIIIIDERMRLIGWNRFSRDTINGLSDNEMPGINPM KRVHPDDLPEMIRKMRNVIDLDIELSAEFRMYHKSGPPYKWAMCRGKRTIIEGKTCVVAVVTEITDLKEAEEQRKKLQEQ LLQLQKMELVGQLASGIAHDFNNALAAIIGNTELALKKLDPANPAVSNITDIHTLATRSANLTRQLLAFARKQMAMPRVL NLTEEVSDCLRLYQRLIDKNIHLEWHLCDEPIQVKLDPTQLEQILSNLLVNARDAIDGSGCITVRCEGARFEPTDGKTCN PRLSPGDYARLSITDSGCGIEASVLPHIYEPFFTTKEIGKGIGLGLSSVYGIVRQNNGHIECHSEPGKGTTFDIWLPLHQ ESQQKTDVHADKPQTELKTKAKIMVVEDEPYILKLVQDILESHEFTVFTATDADQCLLAAKTHEYRIDLLVTDVVLPTMN GIEQSRVLQKKNPAMKCLFMSAHAPDNVDGQKKLRVGVDFIEKPFGIDEFLRAIDQVLNSEVEKI
Sequences:
>Translated_545_residues MPTPLFDTCLSSDDLNAFDASQKPGTTTFNTLASLTELYDAIPASIIIIDERMRLIGWNRFSRDTINGLSDNEMPGINPM KRVHPDDLPEMIRKMRNVIDLDIELSAEFRMYHKSGPPYKWAMCRGKRTIIEGKTCVVAVVTEITDLKEAEEQRKKLQEQ LLQLQKMELVGQLASGIAHDFNNALAAIIGNTELALKKLDPANPAVSNITDIHTLATRSANLTRQLLAFARKQMAMPRVL NLTEEVSDCLRLYQRLIDKNIHLEWHLCDEPIQVKLDPTQLEQILSNLLVNARDAIDGSGCITVRCEGARFEPTDGKTCN PRLSPGDYARLSITDSGCGIEASVLPHIYEPFFTTKEIGKGIGLGLSSVYGIVRQNNGHIECHSEPGKGTTFDIWLPLHQ ESQQKTDVHADKPQTELKTKAKIMVVEDEPYILKLVQDILESHEFTVFTATDADQCLLAAKTHEYRIDLLVTDVVLPTMN GIEQSRVLQKKNPAMKCLFMSAHAPDNVDGQKKLRVGVDFIEKPFGIDEFLRAIDQVLNSEVEKI >Mature_544_residues PTPLFDTCLSSDDLNAFDASQKPGTTTFNTLASLTELYDAIPASIIIIDERMRLIGWNRFSRDTINGLSDNEMPGINPMK RVHPDDLPEMIRKMRNVIDLDIELSAEFRMYHKSGPPYKWAMCRGKRTIIEGKTCVVAVVTEITDLKEAEEQRKKLQEQL LQLQKMELVGQLASGIAHDFNNALAAIIGNTELALKKLDPANPAVSNITDIHTLATRSANLTRQLLAFARKQMAMPRVLN LTEEVSDCLRLYQRLIDKNIHLEWHLCDEPIQVKLDPTQLEQILSNLLVNARDAIDGSGCITVRCEGARFEPTDGKTCNP RLSPGDYARLSITDSGCGIEASVLPHIYEPFFTTKEIGKGIGLGLSSVYGIVRQNNGHIECHSEPGKGTTFDIWLPLHQE SQQKTDVHADKPQTELKTKAKIMVVEDEPYILKLVQDILESHEFTVFTATDADQCLLAAKTHEYRIDLLVTDVVLPTMNG IEQSRVLQKKNPAMKCLFMSAHAPDNVDGQKKLRVGVDFIEKPFGIDEFLRAIDQVLNSEVEKI
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=267, Percent_Identity=29.9625468164794, Blast_Score=115, Evalue=8e-27, Organism=Escherichia coli, GI1788549, Length=253, Percent_Identity=29.6442687747036, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1788713, Length=269, Percent_Identity=28.6245353159851, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI145693157, Length=285, Percent_Identity=26.3157894736842, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI87081816, Length=260, Percent_Identity=26.5384615384615, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI48994928, Length=522, Percent_Identity=24.7126436781609, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790300, Length=281, Percent_Identity=27.7580071174377, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1790861, Length=263, Percent_Identity=27.3764258555133, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786783, Length=238, Percent_Identity=26.0504201680672, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 61041; Mature: 60910
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPLFDTCLSSDDLNAFDASQKPGTTTFNTLASLTELYDAIPASIIIIDERMRLIGWNR CCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCC FSRDTINGLSDNEMPGINPMKRVHPDDLPEMIRKMRNVIDLDIELSAEFRMYHKSGPPYK CCHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHEECEEEECCEEEEEECCCCCEE WAMCRGKRTIIEGKTCVVAVVTEITDLKEAEEQRKKLQEQLLQLQKMELVGQLASGIAHD EEEECCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNNALAAIIGNTELALKKLDPANPAVSNITDIHTLATRSANLTRQLLAFARKQMAMPRVL HHHHHHHHCCCCHHEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH NLTEEVSDCLRLYQRLIDKNIHLEWHLCDEPIQVKLDPTQLEQILSNLLVNARDAIDGSG HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCC CITVRCEGARFEPTDGKTCNPRLSPGDYARLSITDSGCGIEASVLPHIYEPFFTTKEIGK EEEEEECCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCHHHHCC GIGLGLSSVYGIVRQNNGHIECHSEPGKGTTFDIWLPLHQESQQKTDVHADKPQTELKTK CCCCCHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHCCCCCCCCHHHHCCC AKIMVVEDEPYILKLVQDILESHEFTVFTATDADQCLLAAKTHEYRIDLLVTDVVLPTMN EEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCEEEEEEEEHHHHHCCC GIEQSRVLQKKNPAMKCLFMSAHAPDNVDGQKKLRVGVDFIEKPFGIDEFLRAIDQVLNS CHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHEECHHHHHCCCCHHHHHHHHHHHHHH EVEKI HHHCC >Mature Secondary Structure PTPLFDTCLSSDDLNAFDASQKPGTTTFNTLASLTELYDAIPASIIIIDERMRLIGWNR CCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCC FSRDTINGLSDNEMPGINPMKRVHPDDLPEMIRKMRNVIDLDIELSAEFRMYHKSGPPYK CCHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHEECEEEECCEEEEEECCCCCEE WAMCRGKRTIIEGKTCVVAVVTEITDLKEAEEQRKKLQEQLLQLQKMELVGQLASGIAHD EEEECCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNNALAAIIGNTELALKKLDPANPAVSNITDIHTLATRSANLTRQLLAFARKQMAMPRVL HHHHHHHHCCCCHHEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH NLTEEVSDCLRLYQRLIDKNIHLEWHLCDEPIQVKLDPTQLEQILSNLLVNARDAIDGSG HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCC CITVRCEGARFEPTDGKTCNPRLSPGDYARLSITDSGCGIEASVLPHIYEPFFTTKEIGK EEEEEECCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCHHHHCC GIGLGLSSVYGIVRQNNGHIECHSEPGKGTTFDIWLPLHQESQQKTDVHADKPQTELKTK CCCCCHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHCCCCCCCCHHHHCCC AKIMVVEDEPYILKLVQDILESHEFTVFTATDADQCLLAAKTHEYRIDLLVTDVVLPTMN EEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCEEEEEEEEHHHHHCCC GIEQSRVLQKKNPAMKCLFMSAHAPDNVDGQKKLRVGVDFIEKPFGIDEFLRAIDQVLNS CHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHEECHHHHHCCCCHHHHHHHHHHHHHH EVEKI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA