| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674509
Identifier: 21674509
GI number: 21674509
Start: 1601517
End: 1601834
Strand: Direct
Name: 21674509
Synonym: CT1691
Alternate gene names: NA
Gene position: 1601517-1601834 (Clockwise)
Preceding gene: 21674507
Following gene: 21674511
Centisome position: 74.32
GC content: 56.6
Gene sequence:
>318_bases TTGTCGGAAAACCCGGACATCGAGTTCAACAAAAATCTCACTCTCGGCCAGCGCATGGCGGACTGCATTCTGCTCAACCT CGTGCTCTCGACCCTCGCCGCCATCCAGGCTCCGGTCATCATGATGAGCCAGAATCGCCAGGAGGAACGCGACCGACAAC GCGCCATGTACGACTACAAAGTCAACCTGAAAGCCGAACTCGAAATCCGCCAGCTCCACCAGAACGTCGTCCACCTGCGC TCAAAGCAATGGGAGCGGCTGGTGGAAATCCAGGCGATTCAGATGGAGTTGATTCACGAGTTGCGGGGGAGGAAATAG
Upstream 100 bases:
>100_bases GTTCCAGCACCTCTACGTCGAATCGCTGCTGGAGGAGGAGAAGGGCGAGCTGACGGAGCTTGAGCGGGATGTCATCGAAG GGCTGCGCAAGCACGAAATT
Downstream 100 bases:
>100_bases AAAAACACGGGACAAATGGGTCAGATAGTTCCTTTGCGAGAAAATCACTCACCCAATCATAGTCCAAATCGAAATCGGAC TTGCAATCGTGATTGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSENPDIEFNKNLTLGQRMADCILLNLVLSTLAAIQAPVIMMSQNRQEERDRQRAMYDYKVNLKAELEIRQLHQNVVHLR SKQWERLVEIQAIQMELIHELRGRK
Sequences:
>Translated_105_residues MSENPDIEFNKNLTLGQRMADCILLNLVLSTLAAIQAPVIMMSQNRQEERDRQRAMYDYKVNLKAELEIRQLHQNVVHLR SKQWERLVEIQAIQMELIHELRGRK >Mature_104_residues SENPDIEFNKNLTLGQRMADCILLNLVLSTLAAIQAPVIMMSQNRQEERDRQRAMYDYKVNLKAELEIRQLHQNVVHLRS KQWERLVEIQAIQMELIHELRGRK
Specific function: Unknown
COG id: COG4420
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12455; Mature: 12324
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENPDIEFNKNLTLGQRMADCILLNLVLSTLAAIQAPVIMMSQNRQEERDRQRAMYDYK CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHC VNLKAELEIRQLHQNVVHLRSKQWERLVEIQAIQMELIHELRGRK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SENPDIEFNKNLTLGQRMADCILLNLVLSTLAAIQAPVIMMSQNRQEERDRQRAMYDYK CCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHC VNLKAELEIRQLHQNVVHLRSKQWERLVEIQAIQMELIHELRGRK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA