Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21674506

Identifier: 21674506

GI number: 21674506

Start: 1597931

End: 1598182

Strand: Direct

Name: 21674506

Synonym: CT1688

Alternate gene names: NA

Gene position: 1597931-1598182 (Clockwise)

Preceding gene: 21674504

Following gene: 21674507

Centisome position: 74.15

GC content: 50.0

Gene sequence:

>252_bases
ATGGCTTTCAGTTGCGGCGCTCAAACAGATGGTCTGTTCACTGTGTCAGGCGTGAGGATTCTCTTCCTTGGGCTTGAAAA
ACATACAGCCGCCTTCAGCGACGACATCCTTACCGAAGCAGGTACCGACGGACGGATTCGCGGGATTGACGGTAAAGCTC
TGACACTCCTGGCACTGCTTACCGGGCTCTGCTTTCTGTTTGTACATGATCTCCATATTCGTAATACAGTTTATCGGTTC
AACAATGGTTGA

Upstream 100 bases:

>100_bases
AGCAGGAATTCCGGAGGTGTCTTTCGATAACAACCAGCCGAAACCCCTGCAATAGAAGAACTGTACCTCACGCAACTGAA
AACCATGAGCCTGCAGATTC

Downstream 100 bases:

>100_bases
TCCGTCTCATCACGGACGTTTGGAATATATACTTCAAAACAAATTTTCATCGCGTTTGTAACCCTCCTGAAACCTTTGTC
ATAACCGGAACCGTTTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MAFSCGAQTDGLFTVSGVRILFLGLEKHTAAFSDDILTEAGTDGRIRGIDGKALTLLALLTGLCFLFVHDLHIRNTVYRF
NNG

Sequences:

>Translated_83_residues
MAFSCGAQTDGLFTVSGVRILFLGLEKHTAAFSDDILTEAGTDGRIRGIDGKALTLLALLTGLCFLFVHDLHIRNTVYRF
NNG
>Mature_82_residues
AFSCGAQTDGLFTVSGVRILFLGLEKHTAAFSDDILTEAGTDGRIRGIDGKALTLLALLTGLCFLFVHDLHIRNTVYRFN
NG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8988; Mature: 8857

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSCGAQTDGLFTVSGVRILFLGLEKHTAAFSDDILTEAGTDGRIRGIDGKALTLLALL
CCCCCCCCCCCEEEECCEEEEEEECCHHCCCCCCCHHHCCCCCCEEEECCCHHHHHHHHH
TGLCFLFVHDLHIRNTVYRFNNG
HHHHHHHHHHHHHCCEEEEECCC
>Mature Secondary Structure 
AFSCGAQTDGLFTVSGVRILFLGLEKHTAAFSDDILTEAGTDGRIRGIDGKALTLLALL
CCCCCCCCCCEEEECCEEEEEEECCHHCCCCCCCHHHCCCCCCEEEECCCHHHHHHHHH
TGLCFLFVHDLHIRNTVYRFNNG
HHHHHHHHHHHHHCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA