| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674506
Identifier: 21674506
GI number: 21674506
Start: 1597931
End: 1598182
Strand: Direct
Name: 21674506
Synonym: CT1688
Alternate gene names: NA
Gene position: 1597931-1598182 (Clockwise)
Preceding gene: 21674504
Following gene: 21674507
Centisome position: 74.15
GC content: 50.0
Gene sequence:
>252_bases ATGGCTTTCAGTTGCGGCGCTCAAACAGATGGTCTGTTCACTGTGTCAGGCGTGAGGATTCTCTTCCTTGGGCTTGAAAA ACATACAGCCGCCTTCAGCGACGACATCCTTACCGAAGCAGGTACCGACGGACGGATTCGCGGGATTGACGGTAAAGCTC TGACACTCCTGGCACTGCTTACCGGGCTCTGCTTTCTGTTTGTACATGATCTCCATATTCGTAATACAGTTTATCGGTTC AACAATGGTTGA
Upstream 100 bases:
>100_bases AGCAGGAATTCCGGAGGTGTCTTTCGATAACAACCAGCCGAAACCCCTGCAATAGAAGAACTGTACCTCACGCAACTGAA AACCATGAGCCTGCAGATTC
Downstream 100 bases:
>100_bases TCCGTCTCATCACGGACGTTTGGAATATATACTTCAAAACAAATTTTCATCGCGTTTGTAACCCTCCTGAAACCTTTGTC ATAACCGGAACCGTTTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MAFSCGAQTDGLFTVSGVRILFLGLEKHTAAFSDDILTEAGTDGRIRGIDGKALTLLALLTGLCFLFVHDLHIRNTVYRF NNG
Sequences:
>Translated_83_residues MAFSCGAQTDGLFTVSGVRILFLGLEKHTAAFSDDILTEAGTDGRIRGIDGKALTLLALLTGLCFLFVHDLHIRNTVYRF NNG >Mature_82_residues AFSCGAQTDGLFTVSGVRILFLGLEKHTAAFSDDILTEAGTDGRIRGIDGKALTLLALLTGLCFLFVHDLHIRNTVYRFN NG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8988; Mature: 8857
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSCGAQTDGLFTVSGVRILFLGLEKHTAAFSDDILTEAGTDGRIRGIDGKALTLLALL CCCCCCCCCCCEEEECCEEEEEEECCHHCCCCCCCHHHCCCCCCEEEECCCHHHHHHHHH TGLCFLFVHDLHIRNTVYRFNNG HHHHHHHHHHHHHCCEEEEECCC >Mature Secondary Structure AFSCGAQTDGLFTVSGVRILFLGLEKHTAAFSDDILTEAGTDGRIRGIDGKALTLLALL CCCCCCCCCCEEEECCEEEEEEECCHHCCCCCCCHHHCCCCCCEEEECCCHHHHHHHHH TGLCFLFVHDLHIRNTVYRFNNG HHHHHHHHHHHHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA