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The map label for this gene is elbB [H]

Identifier: 21674498

GI number: 21674498

Start: 1589742

End: 1590398

Strand: Direct

Name: elbB [H]

Synonym: CT1680

Alternate gene names: 21674498

Gene position: 1589742-1590398 (Clockwise)

Preceding gene: 21674496

Following gene: 21674500

Centisome position: 73.77

GC content: 59.82

Gene sequence:

>657_bases
ATGAAAAAGATTGGAGTGATCCTTTCAGGGTGTGGCGTCTATGACGGAACGGAAATCCATGAAGCGGTACTGACCCTGCT
GGCGCTCGACAAGGCGCAGGCCAAAGCGGTCTGCTTCGCACCCGACATTGCTCAGCGCCATGTAGTCAATCATCTCACGG
GCGAAATATCGGAAAACGAAACGCGAAACGTGCTGGTCGAATCGGCCCGCATCGCGCGTGGTTCGATCCGGAACCTGCGG
GACATCGACACGATGATCCTCGACGGCCTCATCATCCCCGGCGGCTACGGCGCGGCAAAGAATCTCAGCGATTACGCCGT
CACCGGTGCGAACTGCGAAGTGCTTCCGGAGGTCGCCGATGCGGTCATGCGGTTCCGCAAAAGAGGAAAACCACTCGGCT
TCCTCTGCATTGCGCCGGTCATCGCGGCAAAGCTGTTTGGCTCGGAGGGGGTCGAAGTGACCATCGGCAGCGATGAGCAA
ACGGCGGCGGACATCGCAGCGATGGGAGCGAAACATGTGCCGGCAGCGGTCGAGGAGATCATCGTCAGCCCCGACGCGAA
AATCGTCACCACCCCGGCCTACATGCTCGGCCCCGGCATCAGCGACATTGCCAAAGGCATCGACAAACTGGTTGCCAAAG
TGCTCGAACTGGCGTGA

Upstream 100 bases:

>100_bases
TCGACCACAAATGTTCGAAAAGCGGCTATTTTCAAAAGCGTCGCCTTTTTTATACCATACCATGAAAAGCTCATCCTCCC
AAACACAAACCCGGAGCAGC

Downstream 100 bases:

>100_bases
AAACCGCTCACTCCGGCTCGTAGGGAACGCCGAGCTCTTTCGGAGGCGCAGATTTGCCGACGAAACCGGCAAGCACCAGC
AGGGTTATGAGGTATGGCAG

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKKIGVILSGCGVYDGTEIHEAVLTLLALDKAQAKAVCFAPDIAQRHVVNHLTGEISENETRNVLVESARIARGSIRNLR
DIDTMILDGLIIPGGYGAAKNLSDYAVTGANCEVLPEVADAVMRFRKRGKPLGFLCIAPVIAAKLFGSEGVEVTIGSDEQ
TAADIAAMGAKHVPAAVEEIIVSPDAKIVTTPAYMLGPGISDIAKGIDKLVAKVLELA

Sequences:

>Translated_218_residues
MKKIGVILSGCGVYDGTEIHEAVLTLLALDKAQAKAVCFAPDIAQRHVVNHLTGEISENETRNVLVESARIARGSIRNLR
DIDTMILDGLIIPGGYGAAKNLSDYAVTGANCEVLPEVADAVMRFRKRGKPLGFLCIAPVIAAKLFGSEGVEVTIGSDEQ
TAADIAAMGAKHVPAAVEEIIVSPDAKIVTTPAYMLGPGISDIAKGIDKLVAKVLELA
>Mature_218_residues
MKKIGVILSGCGVYDGTEIHEAVLTLLALDKAQAKAVCFAPDIAQRHVVNHLTGEISENETRNVLVESARIARGSIRNLR
DIDTMILDGLIIPGGYGAAKNLSDYAVTGANCEVLPEVADAVMRFRKRGKPLGFLCIAPVIAAKLFGSEGVEVTIGSDEQ
TAADIAAMGAKHVPAAVEEIIVSPDAKIVTTPAYMLGPGISDIAKGIDKLVAKVLELA

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=224, Percent_Identity=48.6607142857143, Blast_Score=203, Evalue=1e-52,
Organism=Homo sapiens, GI296531408, Length=224, Percent_Identity=42.8571428571429, Blast_Score=160, Evalue=6e-40,
Organism=Escherichia coli, GI87082228, Length=218, Percent_Identity=58.7155963302752, Blast_Score=246, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22872; Mature: 22872

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGVILSGCGVYDGTEIHEAVLTLLALDKAQAKAVCFAPDIAQRHVVNHLTGEISENE
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCCCCC
TRNVLVESARIARGSIRNLRDIDTMILDGLIIPGGYGAAKNLSDYAVTGANCEVLPEVAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCEECCCCCEECHHHHH
AVMRFRKRGKPLGFLCIAPVIAAKLFGSEGVEVTIGSDEQTAADIAAMGAKHVPAAVEEI
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHH
IVSPDAKIVTTPAYMLGPGISDIAKGIDKLVAKVLELA
HCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIGVILSGCGVYDGTEIHEAVLTLLALDKAQAKAVCFAPDIAQRHVVNHLTGEISENE
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCCCCC
TRNVLVESARIARGSIRNLRDIDTMILDGLIIPGGYGAAKNLSDYAVTGANCEVLPEVAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCEECCCCCEECHHHHH
AVMRFRKRGKPLGFLCIAPVIAAKLFGSEGVEVTIGSDEQTAADIAAMGAKHVPAAVEEI
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHH
IVSPDAKIVTTPAYMLGPGISDIAKGIDKLVAKVLELA
HCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]