| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674497
Identifier: 21674497
GI number: 21674497
Start: 1589048
End: 1589743
Strand: Reverse
Name: 21674497
Synonym: CT1679
Alternate gene names: NA
Gene position: 1589743-1589048 (Counterclockwise)
Preceding gene: 21674499
Following gene: 21674495
Centisome position: 73.77
GC content: 57.76
Gene sequence:
>696_bases ATGCTGCTCCGGGTTTGTGTTTGGGAGGATGAGCTTTTCATGGTATGGTATAAAAAAGGCGACGCTTTTGAAAATAGCCG CTTTTCGAACATTTGTGGTCGAGACTTGATGATCAAAAAATTTTTCGCGGCGCTCCAGCGTAGAGATCCGTTTTTGCTGT TTGTCGTGGTGTTGCTGTTGGTGACCGGCTGCGTAAAGCGGGACAAGCGCATACGGAGCATCACCATCGGCGAGCAGGTC TGGATGGCTGAAAACCTCGCCACCGACTGCTACCGCAACGGTGATCCGATTCGTCACGCGAAGAGCGTTGAGGAGTGGAA CGACGCGATCTCGAGGCAGGAGGGGGCGTGGTGCGACTACGATAACGATCCTGCCAGCGGTCGCCTTTACAACTGGTTCG CCGTCGCCGACCCGCGCGGCCTTGCGCCCGTCGGCTGGCATGTGCCGAACGACGAAGAGTGGCGCGAACTCGAAGCGGCA ACGGGCGGACGTGGTTTTGAGACCGCCTTCACCGGAAGCCGCAACTGCCTCGGCCTTTTCTTTGGCCAAGGCAGTACCGC CTTTTTCTGGGCGGCCACGCCTTCAGGCGAGTTCGACGCCTGGAACCGCGAAATCAGCAAAACAGGCGGGAAAATGCAGC GGGTCAGCGTAGCCAAAGGGTTGGGCCTTTCGGTGCGATGCGTGAAGGACAATTGA
Upstream 100 bases:
>100_bases GGCCTGCGCCTTGTCGAGCGCCAGCAGGGTCAGTACCGCTTCATGGATTTCCGTTCCGTCATAGACGCCACACCCTGAAA GGATCACTCCAATCTTTTTC
Downstream 100 bases:
>100_bases AGACTGATCGGGAGCGCGCGATCTACGCTTTCAACCGCCCAAAACCCGGCACGAACTTGCCCACTCTTGAGGCGTATTTT CGGTACTCCGGGTGGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLLRVCVWEDELFMVWYKKGDAFENSRFSNICGRDLMIKKFFAALQRRDPFLLFVVVLLLVTGCVKRDKRIRSITIGEQV WMAENLATDCYRNGDPIRHAKSVEEWNDAISRQEGAWCDYDNDPASGRLYNWFAVADPRGLAPVGWHVPNDEEWRELEAA TGGRGFETAFTGSRNCLGLFFGQGSTAFFWAATPSGEFDAWNREISKTGGKMQRVSVAKGLGLSVRCVKDN
Sequences:
>Translated_231_residues MLLRVCVWEDELFMVWYKKGDAFENSRFSNICGRDLMIKKFFAALQRRDPFLLFVVVLLLVTGCVKRDKRIRSITIGEQV WMAENLATDCYRNGDPIRHAKSVEEWNDAISRQEGAWCDYDNDPASGRLYNWFAVADPRGLAPVGWHVPNDEEWRELEAA TGGRGFETAFTGSRNCLGLFFGQGSTAFFWAATPSGEFDAWNREISKTGGKMQRVSVAKGLGLSVRCVKDN >Mature_231_residues MLLRVCVWEDELFMVWYKKGDAFENSRFSNICGRDLMIKKFFAALQRRDPFLLFVVVLLLVTGCVKRDKRIRSITIGEQV WMAENLATDCYRNGDPIRHAKSVEEWNDAISRQEGAWCDYDNDPASGRLYNWFAVADPRGLAPVGWHVPNDEEWRELEAA TGGRGFETAFTGSRNCLGLFFGQGSTAFFWAATPSGEFDAWNREISKTGGKMQRVSVAKGLGLSVRCVKDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26211; Mature: 26211
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRVCVWEDELFMVWYKKGDAFENSRFSNICGRDLMIKKFFAALQRRDPFLLFVVVLLL CEEEEEEECCCEEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH VTGCVKRDKRIRSITIGEQVWMAENLATDCYRNGDPIRHAKSVEEWNDAISRQEGAWCDY HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC DNDPASGRLYNWFAVADPRGLAPVGWHVPNDEEWRELEAATGGRGFETAFTGSRNCLGLF CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEE FGQGSTAFFWAATPSGEFDAWNREISKTGGKMQRVSVAKGLGLSVRCVKDN ECCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEHHHHCCCCCEEEEEECC >Mature Secondary Structure MLLRVCVWEDELFMVWYKKGDAFENSRFSNICGRDLMIKKFFAALQRRDPFLLFVVVLLL CEEEEEEECCCEEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH VTGCVKRDKRIRSITIGEQVWMAENLATDCYRNGDPIRHAKSVEEWNDAISRQEGAWCDY HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC DNDPASGRLYNWFAVADPRGLAPVGWHVPNDEEWRELEAATGGRGFETAFTGSRNCLGLF CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEE FGQGSTAFFWAATPSGEFDAWNREISKTGGKMQRVSVAKGLGLSVRCVKDN ECCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA