Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21674496

Identifier: 21674496

GI number: 21674496

Start: 1588489

End: 1589025

Strand: Direct

Name: 21674496

Synonym: CT1678

Alternate gene names: NA

Gene position: 1588489-1589025 (Clockwise)

Preceding gene: 21674494

Following gene: 21674498

Centisome position: 73.71

GC content: 57.54

Gene sequence:

>537_bases
TTGAACGACAGTCAAGATACTGCCATGGAAAAGGAATCCGGCAAATCGAAACGTTTTGGACAACGCGGAGAACATCTGGT
CATCATCCAGATGGCGCTCGTGGCGATCTATTTTTTCACTCCTGCCTGGCCTGATCTGCGCAGCGGAGAACTTTACCGTC
ACCTCGCGCTGGTGCGCTGGATCGGCCTGGTTGCCGGAATGGCCGGCGGAGCCGTGTTCGGCATCGGCGGCTCACTGAAC
ATCCGCAAGTACCTCACGCCGCTGCCCTACCCGGTCGAGCACAGCAGACTGGTCGATACCGGCGTTTACGCTCTGGTGCG
CCATCCGCTCTACAGCTCTCAGCTCTTTGCCGCCGCGGGATGGACCATCTTCTCCCTGAGCCTCACGCACCTGATCGTCA
CCCTTGTGGCATTGATTTTCTTTAACTATAAAGCCTCGAAAGAGGAAGCGTGGCTGATGGAGCGCCACCCGGAGTACCGA
AAATACGCCTCAAGAGTGGGCAAGTTCGTGCCGGGTTTTGGGCGGTTGAAAGCGTAG

Upstream 100 bases:

>100_bases
AGAGTTTCTTTCGGAGTGATCATAATGTGCTGTTGACTATGGTTCAAGCGTGATACTGAATCCATTTCCTGCATTTTTGA
AGATTTTAAAATAGAGCAAT

Downstream 100 bases:

>100_bases
ATCGCGCGCTCCCGATCAGTCTTCAATTGTCCTTCACGCATCGCACCGAAAGGCCCAACCCTTTGGCTACGCTGACCCGC
TGCATTTTCCCGCCTGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MNDSQDTAMEKESGKSKRFGQRGEHLVIIQMALVAIYFFTPAWPDLRSGELYRHLALVRWIGLVAGMAGGAVFGIGGSLN
IRKYLTPLPYPVEHSRLVDTGVYALVRHPLYSSQLFAAAGWTIFSLSLTHLIVTLVALIFFNYKASKEEAWLMERHPEYR
KYASRVGKFVPGFGRLKA

Sequences:

>Translated_178_residues
MNDSQDTAMEKESGKSKRFGQRGEHLVIIQMALVAIYFFTPAWPDLRSGELYRHLALVRWIGLVAGMAGGAVFGIGGSLN
IRKYLTPLPYPVEHSRLVDTGVYALVRHPLYSSQLFAAAGWTIFSLSLTHLIVTLVALIFFNYKASKEEAWLMERHPEYR
KYASRVGKFVPGFGRLKA
>Mature_178_residues
MNDSQDTAMEKESGKSKRFGQRGEHLVIIQMALVAIYFFTPAWPDLRSGELYRHLALVRWIGLVAGMAGGAVFGIGGSLN
IRKYLTPLPYPVEHSRLVDTGVYALVRHPLYSSQLFAAAGWTIFSLSLTHLIVTLVALIFFNYKASKEEAWLMERHPEYR
KYASRVGKFVPGFGRLKA

Specific function: Unknown

COG id: COG2020

COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20022; Mature: 20022

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSQDTAMEKESGKSKRFGQRGEHLVIIQMALVAIYFFTPAWPDLRSGELYRHLALVRW
CCCCHHHHHHHHCCCHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
IGLVAGMAGGAVFGIGGSLNIRKYLTPLPYPVEHSRLVDTGVYALVRHPLYSSQLFAAAG
HHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC
WTIFSLSLTHLIVTLVALIFFNYKASKEEAWLMERHPEYRKYASRVGKFVPGFGRLKA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNDSQDTAMEKESGKSKRFGQRGEHLVIIQMALVAIYFFTPAWPDLRSGELYRHLALVRW
CCCCHHHHHHHHCCCHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
IGLVAGMAGGAVFGIGGSLNIRKYLTPLPYPVEHSRLVDTGVYALVRHPLYSSQLFAAAG
HHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC
WTIFSLSLTHLIVTLVALIFFNYKASKEEAWLMERHPEYRKYASRVGKFVPGFGRLKA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA