| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674496
Identifier: 21674496
GI number: 21674496
Start: 1588489
End: 1589025
Strand: Direct
Name: 21674496
Synonym: CT1678
Alternate gene names: NA
Gene position: 1588489-1589025 (Clockwise)
Preceding gene: 21674494
Following gene: 21674498
Centisome position: 73.71
GC content: 57.54
Gene sequence:
>537_bases TTGAACGACAGTCAAGATACTGCCATGGAAAAGGAATCCGGCAAATCGAAACGTTTTGGACAACGCGGAGAACATCTGGT CATCATCCAGATGGCGCTCGTGGCGATCTATTTTTTCACTCCTGCCTGGCCTGATCTGCGCAGCGGAGAACTTTACCGTC ACCTCGCGCTGGTGCGCTGGATCGGCCTGGTTGCCGGAATGGCCGGCGGAGCCGTGTTCGGCATCGGCGGCTCACTGAAC ATCCGCAAGTACCTCACGCCGCTGCCCTACCCGGTCGAGCACAGCAGACTGGTCGATACCGGCGTTTACGCTCTGGTGCG CCATCCGCTCTACAGCTCTCAGCTCTTTGCCGCCGCGGGATGGACCATCTTCTCCCTGAGCCTCACGCACCTGATCGTCA CCCTTGTGGCATTGATTTTCTTTAACTATAAAGCCTCGAAAGAGGAAGCGTGGCTGATGGAGCGCCACCCGGAGTACCGA AAATACGCCTCAAGAGTGGGCAAGTTCGTGCCGGGTTTTGGGCGGTTGAAAGCGTAG
Upstream 100 bases:
>100_bases AGAGTTTCTTTCGGAGTGATCATAATGTGCTGTTGACTATGGTTCAAGCGTGATACTGAATCCATTTCCTGCATTTTTGA AGATTTTAAAATAGAGCAAT
Downstream 100 bases:
>100_bases ATCGCGCGCTCCCGATCAGTCTTCAATTGTCCTTCACGCATCGCACCGAAAGGCCCAACCCTTTGGCTACGCTGACCCGC TGCATTTTCCCGCCTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MNDSQDTAMEKESGKSKRFGQRGEHLVIIQMALVAIYFFTPAWPDLRSGELYRHLALVRWIGLVAGMAGGAVFGIGGSLN IRKYLTPLPYPVEHSRLVDTGVYALVRHPLYSSQLFAAAGWTIFSLSLTHLIVTLVALIFFNYKASKEEAWLMERHPEYR KYASRVGKFVPGFGRLKA
Sequences:
>Translated_178_residues MNDSQDTAMEKESGKSKRFGQRGEHLVIIQMALVAIYFFTPAWPDLRSGELYRHLALVRWIGLVAGMAGGAVFGIGGSLN IRKYLTPLPYPVEHSRLVDTGVYALVRHPLYSSQLFAAAGWTIFSLSLTHLIVTLVALIFFNYKASKEEAWLMERHPEYR KYASRVGKFVPGFGRLKA >Mature_178_residues MNDSQDTAMEKESGKSKRFGQRGEHLVIIQMALVAIYFFTPAWPDLRSGELYRHLALVRWIGLVAGMAGGAVFGIGGSLN IRKYLTPLPYPVEHSRLVDTGVYALVRHPLYSSQLFAAAGWTIFSLSLTHLIVTLVALIFFNYKASKEEAWLMERHPEYR KYASRVGKFVPGFGRLKA
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20022; Mature: 20022
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDSQDTAMEKESGKSKRFGQRGEHLVIIQMALVAIYFFTPAWPDLRSGELYRHLALVRW CCCCHHHHHHHHCCCHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH IGLVAGMAGGAVFGIGGSLNIRKYLTPLPYPVEHSRLVDTGVYALVRHPLYSSQLFAAAG HHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC WTIFSLSLTHLIVTLVALIFFNYKASKEEAWLMERHPEYRKYASRVGKFVPGFGRLKA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNDSQDTAMEKESGKSKRFGQRGEHLVIIQMALVAIYFFTPAWPDLRSGELYRHLALVRW CCCCHHHHHHHHCCCHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH IGLVAGMAGGAVFGIGGSLNIRKYLTPLPYPVEHSRLVDTGVYALVRHPLYSSQLFAAAG HHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC WTIFSLSLTHLIVTLVALIFFNYKASKEEAWLMERHPEYRKYASRVGKFVPGFGRLKA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA