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The map label for this gene is ycaC [C]

Identifier: 21674495

GI number: 21674495

Start: 1587866

End: 1588411

Strand: Reverse

Name: ycaC [C]

Synonym: CT1677

Alternate gene names: 21674495

Gene position: 1588411-1587866 (Counterclockwise)

Preceding gene: 21674497

Following gene: 21674492

Centisome position: 73.71

GC content: 53.66

Gene sequence:

>546_bases
ATGATCACTCCGAAAGAAACTCTTCTGCTCGTCATCGATATTCAGGAAAAACTTGCTCCCGCCGTTTTTCAGTCGGATCG
CGTCATAAAAAACACTGGCAAGCTGATCCGGGCGTGCAAGCTTCTCGGGGTGCCGGTGGTTCATACCGAACAGTATCCGA
AAGGACTTGGTCGCACGGTCGATGAACTGGGCGTGCTGATTGGCGACGATTTGCCGTTCGAGAAGCTTTCGTTTAGTTGT
TGCGGCAACGAAGAGTTCATGAAACGCCTTCGTGTGCTTGGCTGCAACGACATTCTCGTGGTTGGCATGGAGACTCATGT
GTGCGTTTACCAGACCTGCGTGGAACTGCTTGAGTTTGGGTACAACGTGCATCTGGTCACCGATGGCGTGTCGTCGCGAA
CCGAGGAGAACCGCGCGCTCGGCATCCGCTGCATCGAACGCGCCGGGGCCGTGCCAACCAGCACCGAGATGGCAATGTTC
GAACTCTTGCGTGTTGCTGAAGGTGATACCTTTAAAGCCATATCGAAAATCGTCAAGGAAGACTGA

Upstream 100 bases:

>100_bases
GCAGTATCTTGACTGTCGTTCAAATTGCTCTATTTTAAAATCTTCAAAAATGCAGGAAATGGATTCAGTATCACGCTTGA
ACCATAGTCAACAGCACATT

Downstream 100 bases:

>100_bases
GGATCCTTCTTTTCGAAATAGATTTTTAGTTAGTTCAGCGCTTCAACACATCCAGCAACTGCCTCTCCAACTCCTGCGTC
CCGTCCGGGAATTCGGGGGT

Product: isochorismatase superfamily hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Amidase; Amidohydrolase; Isochorismatase Family Hydrolase; Isochorismatase Domain-Containing; Hydrolase; Hydrolase Isochorismatase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Nicotinamidase-Related Amidase

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MITPKETLLLVIDIQEKLAPAVFQSDRVIKNTGKLIRACKLLGVPVVHTEQYPKGLGRTVDELGVLIGDDLPFEKLSFSC
CGNEEFMKRLRVLGCNDILVVGMETHVCVYQTCVELLEFGYNVHLVTDGVSSRTEENRALGIRCIERAGAVPTSTEMAMF
ELLRVAEGDTFKAISKIVKED

Sequences:

>Translated_181_residues
MITPKETLLLVIDIQEKLAPAVFQSDRVIKNTGKLIRACKLLGVPVVHTEQYPKGLGRTVDELGVLIGDDLPFEKLSFSC
CGNEEFMKRLRVLGCNDILVVGMETHVCVYQTCVELLEFGYNVHLVTDGVSSRTEENRALGIRCIERAGAVPTSTEMAMF
ELLRVAEGDTFKAISKIVKED
>Mature_181_residues
MITPKETLLLVIDIQEKLAPAVFQSDRVIKNTGKLIRACKLLGVPVVHTEQYPKGLGRTVDELGVLIGDDLPFEKLSFSC
CGNEEFMKRLRVLGCNDILVVGMETHVCVYQTCVELLEFGYNVHLVTDGVSSRTEENRALGIRCIERAGAVPTSTEMAMF
ELLRVAEGDTFKAISKIVKED

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI103471987, Length=178, Percent_Identity=34.8314606741573, Blast_Score=115, Evalue=2e-26,
Organism=Homo sapiens, GI209969695, Length=182, Percent_Identity=31.8681318681319, Blast_Score=97, Evalue=7e-21,
Organism=Homo sapiens, GI13376007, Length=198, Percent_Identity=29.2929292929293, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17540156, Length=180, Percent_Identity=37.7777777777778, Blast_Score=128, Evalue=2e-30,
Organism=Drosophila melanogaster, GI19922924, Length=181, Percent_Identity=39.2265193370166, Blast_Score=119, Evalue=1e-27,
Organism=Drosophila melanogaster, GI21357489, Length=181, Percent_Identity=33.7016574585635, Blast_Score=94, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20061; Mature: 20061

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPKETLLLVIDIQEKLAPAVFQSDRVIKNTGKLIRACKLLGVPVVHTEQYPKGLGRTV
CCCCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEECCHHCHHHCCCH
DELGVLIGDDLPFEKLSFSCCGNEEFMKRLRVLGCNDILVVGMETHVCVYQTCVELLEFG
HHHHHHHCCCCCHHHHEEECCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCC
YNVHLVTDGVSSRTEENRALGIRCIERAGAVPTSTEMAMFELLRVAEGDTFKAISKIVKE
CEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHC
D
C
>Mature Secondary Structure
MITPKETLLLVIDIQEKLAPAVFQSDRVIKNTGKLIRACKLLGVPVVHTEQYPKGLGRTV
CCCCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEECCHHCHHHCCCH
DELGVLIGDDLPFEKLSFSCCGNEEFMKRLRVLGCNDILVVGMETHVCVYQTCVELLEFG
HHHHHHHCCCCCHHHHEEECCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCC
YNVHLVTDGVSSRTEENRALGIRCIERAGAVPTSTEMAMFELLRVAEGDTFKAISKIVKE
CEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA