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The map label for this gene is yebC [C]

Identifier: 21674483

GI number: 21674483

Start: 1573608

End: 1574363

Strand: Reverse

Name: yebC [C]

Synonym: CT1665

Alternate gene names: 21674483

Gene position: 1574363-1573608 (Counterclockwise)

Preceding gene: 21674489

Following gene: 21674482

Centisome position: 73.06

GC content: 59.66

Gene sequence:

>756_bases
ATGTCAGGACACAGTAAATGGGCGACCATCAAGCGTAAAAAGGCCGCCACCGATCAGAAGAGAGGAAGCCTGTTCACCAA
GCTCGTCAAGGAGATCACCATTGCGGCCAAAATGGGCGGTGGCGACCCGACGGGCAATCCGCGTCTGAGGCTCGCCATCG
ATACGGCACGGGCCAACTCGATGCCGATGGACAATATCCAGCGCGCCATCAAAAGAGGCACCGGCGAACTCGAAGGCGCG
ACCTACGAAGAGATCACCTACGAAGGGTACGGCCCGGGCGGCATTGCGATCATTATCGAGACCGCGACCGACAACCGCAA
CCGCACCGTGGCCGACATTCGCCACCTGATGAGCCGCGGCGGCGGGTCGCTCGGCGAGAGTGGCAGCGTCGGCTGGATGT
TCAAGCGCAAGGGTTCCATCGAGGTTCCCAGGTCGGCCATCTCTGAGGACGACCTGATGGAGCTGCTGCTCGACGCCGGA
CTCGAGGAGCTGGAGAGCGACGACGAGCAGTACTTCACCGTGCTGACCGACGTGAAGGATCTGGAGCCGGTCAAGAAGGC
GCTCGAAGAGGCTGGTATTCCGTTCGAGAACGCCAAGATTGACATGATTCCGGACAACTATGTCGAGCTCGATGTCGAGA
ACGCCCGGAAGGCGCTCAAGCTGATCGACGCGCTCGAAAACAGCGATGACGTCCAGGCGGTCTACAGCAACATGGACATG
AGTGAAAGCGTCATGAGCGTGCTTGAAGAAGAGTAA

Upstream 100 bases:

>100_bases
TGTTATTCATACCCCGCAGAATTTGCTTTTCTTAAAGTAAAATAAATCTTTTCATAAACGCGTCATATCCGACTTTTATC
TAATAATCAGGTTGTAACCT

Downstream 100 bases:

>100_bases
CCCATGATTGTACTGGGCATCGATCCGGGCAGCCGCAAAACCGGCTATGGCGTCATCGCCGAAACGGCGGCGGGCTATCG
CGTGCTTGGATGCGGCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSGHSKWATIKRKKAATDQKRGSLFTKLVKEITIAAKMGGGDPTGNPRLRLAIDTARANSMPMDNIQRAIKRGTGELEGA
TYEEITYEGYGPGGIAIIIETATDNRNRTVADIRHLMSRGGGSLGESGSVGWMFKRKGSIEVPRSAISEDDLMELLLDAG
LEELESDDEQYFTVLTDVKDLEPVKKALEEAGIPFENAKIDMIPDNYVELDVENARKALKLIDALENSDDVQAVYSNMDM
SESVMSVLEEE

Sequences:

>Translated_251_residues
MSGHSKWATIKRKKAATDQKRGSLFTKLVKEITIAAKMGGGDPTGNPRLRLAIDTARANSMPMDNIQRAIKRGTGELEGA
TYEEITYEGYGPGGIAIIIETATDNRNRTVADIRHLMSRGGGSLGESGSVGWMFKRKGSIEVPRSAISEDDLMELLLDAG
LEELESDDEQYFTVLTDVKDLEPVKKALEEAGIPFENAKIDMIPDNYVELDVENARKALKLIDALENSDDVQAVYSNMDM
SESVMSVLEEE
>Mature_250_residues
SGHSKWATIKRKKAATDQKRGSLFTKLVKEITIAAKMGGGDPTGNPRLRLAIDTARANSMPMDNIQRAIKRGTGELEGAT
YEEITYEGYGPGGIAIIIETATDNRNRTVADIRHLMSRGGGSLGESGSVGWMFKRKGSIEVPRSAISEDDLMELLLDAGL
EELESDDEQYFTVLTDVKDLEPVKKALEEAGIPFENAKIDMIPDNYVELDVENARKALKLIDALENSDDVQAVYSNMDMS
ESVMSVLEEE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=249, Percent_Identity=31.3253012048193, Blast_Score=131, Evalue=5e-31,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=48.3870967741936, Blast_Score=244, Evalue=3e-66,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=37.0212765957447, Blast_Score=136, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=24.5901639344262, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6321458, Length=266, Percent_Identity=33.0827067669173, Blast_Score=121, Evalue=8e-29,
Organism=Drosophila melanogaster, GI24583305, Length=248, Percent_Identity=27.8225806451613, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1665_CHLTE (Q8KBW7)

Other databases:

- EMBL:   AE006470
- RefSeq:   NP_662548.1
- ProteinModelPortal:   Q8KBW7
- SMR:   Q8KBW7
- GeneID:   1006146
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT1665
- NMPDR:   fig|194439.1.peg.1642
- TIGR:   CT1665
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   CTEP194439:CT_1665-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27547; Mature: 27416

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATIKRKKAATDQKRGSLFTKLVKEITIAAKMGGGDPTGNPRLRLAIDTARANS
CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCC
MPMDNIQRAIKRGTGELEGATYEEITYEGYGPGGIAIIIETATDNRNRTVADIRHLMSRG
CCHHHHHHHHHCCCCCCCCCCHHHEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCC
GGSLGESGSVGWMFKRKGSIEVPRSAISEDDLMELLLDAGLEELESDDEQYFTVLTDVKD
CCCCCCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHCHHHHCCCCHHHHHHHHCHHH
LEPVKKALEEAGIPFENAKIDMIPDNYVELDVENARKALKLIDALENSDDVQAVYSNMDM
HHHHHHHHHHCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCH
SESVMSVLEEE
HHHHHHHHHCC
>Mature Secondary Structure 
SGHSKWATIKRKKAATDQKRGSLFTKLVKEITIAAKMGGGDPTGNPRLRLAIDTARANS
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCC
MPMDNIQRAIKRGTGELEGATYEEITYEGYGPGGIAIIIETATDNRNRTVADIRHLMSRG
CCHHHHHHHHHCCCCCCCCCCHHHEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCC
GGSLGESGSVGWMFKRKGSIEVPRSAISEDDLMELLLDAGLEELESDDEQYFTVLTDVKD
CCCCCCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHCHHHHCCCCHHHHHHHHCHHH
LEPVKKALEEAGIPFENAKIDMIPDNYVELDVENARKALKLIDALENSDDVQAVYSNMDM
HHHHHHHHHHCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCH
SESVMSVLEEE
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901