| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is suhB [H]
Identifier: 21674479
GI number: 21674479
Start: 1569817
End: 1570611
Strand: Direct
Name: suhB [H]
Synonym: CT1661
Alternate gene names: 21674479
Gene position: 1569817-1570611 (Clockwise)
Preceding gene: 21674476
Following gene: 21674480
Centisome position: 72.85
GC content: 61.51
Gene sequence:
>795_bases ATGAACCTCGAACTCCAGACGGCCGTGAAGGCAGCCAAAGCCGCAGGCGCGATTACGCTTTCGAGATTCGGCGAACTTTC TCATCGCGAGATCGTCGCCAAAGAGTACAAGGATTTCGTCACCGAAGTTGACAAGCAGTGTGAAGCAACCATCACGGCCA CCATCACCGAATCGTTCCCTGATGACGGTTTGCTCTGCGAGGAGGGCACCAGCGGCAGTGGCGCTTCCGGGCGCACCTGG ATCGTCGATCCGCTCGATGGCACGCTGAACTTTATCCACTCGTTTCCGGTGTTCGGCATCAGCATCGCCATGCGCGACGC ATCCGGCGAACTCGCGGTGGGCGTGGTTTATCAGCCGGTGCTCGACGAGCTGTTCACTGCCGTCAAGGGACGGGGCGCGT TCCTGAACGGTAAGCGCATCAGTGTCTCGACGCGCGAAGAGATGCAGAGCTATCTCTTCGCCACCGGCCTGCCCTTCAGG GATTACGATCACTACATGGACGGCTACATCGGCCTCTTGCGGGATGTCATCAAGGACTCGGCAGGCATCCGTCGCGCCGG ATCGGCCTCCATCGACCTGGCCTACACCGCCGCCGGACGCTTCGACGGCTTCTTCGAGTACCGACTCTTTCCGTGGGACT TCGCGGCGGGCGTGCTGCTGGTGCGCGAAGCGGGTGGCATCGTAACCGGCATTGCCGGCTCGGATGATGTGTTCGCCCAT ACGAGCATCCTTGCTGGAAGCCCGCTCACCCATCCGCTGCTGCTGGAAAAAGCCCGGCGGCATTTCGGGGCCTGA
Upstream 100 bases:
>100_bases ATTTAATTCCCGCGTGCCGTTATCTTGCTGCGCCTGCACTTCTCAACGACAAATGATATATTGGGCCAGCCATTTTCATT CACCTGACACCATGCAGAAC
Downstream 100 bases:
>100_bases CCCGCGTCAAGCAGCCAATTTGAAGAGTTGGCGCCGCTTTCGTATCTTTGATATTTTTCATCGCAAGCTCCAGCCATCCA TGCTCATTCATCAACGCACC
Product: extragenic suppressor protein SuhB
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNLELQTAVKAAKAAGAITLSRFGELSHREIVAKEYKDFVTEVDKQCEATITATITESFPDDGLLCEEGTSGSGASGRTW IVDPLDGTLNFIHSFPVFGISIAMRDASGELAVGVVYQPVLDELFTAVKGRGAFLNGKRISVSTREEMQSYLFATGLPFR DYDHYMDGYIGLLRDVIKDSAGIRRAGSASIDLAYTAAGRFDGFFEYRLFPWDFAAGVLLVREAGGIVTGIAGSDDVFAH TSILAGSPLTHPLLLEKARRHFGA
Sequences:
>Translated_264_residues MNLELQTAVKAAKAAGAITLSRFGELSHREIVAKEYKDFVTEVDKQCEATITATITESFPDDGLLCEEGTSGSGASGRTW IVDPLDGTLNFIHSFPVFGISIAMRDASGELAVGVVYQPVLDELFTAVKGRGAFLNGKRISVSTREEMQSYLFATGLPFR DYDHYMDGYIGLLRDVIKDSAGIRRAGSASIDLAYTAAGRFDGFFEYRLFPWDFAAGVLLVREAGGIVTGIAGSDDVFAH TSILAGSPLTHPLLLEKARRHFGA >Mature_264_residues MNLELQTAVKAAKAAGAITLSRFGELSHREIVAKEYKDFVTEVDKQCEATITATITESFPDDGLLCEEGTSGSGASGRTW IVDPLDGTLNFIHSFPVFGISIAMRDASGELAVGVVYQPVLDELFTAVKGRGAFLNGKRISVSTREEMQSYLFATGLPFR DYDHYMDGYIGLLRDVIKDSAGIRRAGSASIDLAYTAAGRFDGFFEYRLFPWDFAAGVLLVREAGGIVTGIAGSDDVFAH TSILAGSPLTHPLLLEKARRHFGA
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=261, Percent_Identity=34.0996168582375, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI5031789, Length=201, Percent_Identity=31.8407960199005, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI221625487, Length=201, Percent_Identity=31.8407960199005, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI221625507, Length=113, Percent_Identity=38.0530973451327, Blast_Score=89, Evalue=3e-18, Organism=Escherichia coli, GI1788882, Length=260, Percent_Identity=44.2307692307692, Blast_Score=205, Evalue=2e-54, Organism=Caenorhabditis elegans, GI193202570, Length=250, Percent_Identity=29.6, Blast_Score=127, Evalue=4e-30, Organism=Caenorhabditis elegans, GI193202572, Length=250, Percent_Identity=31.2, Blast_Score=124, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6320493, Length=205, Percent_Identity=39.0243902439024, Blast_Score=128, Evalue=8e-31, Organism=Saccharomyces cerevisiae, GI6321836, Length=234, Percent_Identity=29.0598290598291, Blast_Score=96, Evalue=6e-21, Organism=Drosophila melanogaster, GI21357329, Length=250, Percent_Identity=32.8, Blast_Score=140, Evalue=8e-34, Organism=Drosophila melanogaster, GI24664922, Length=223, Percent_Identity=35.4260089686099, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI24664926, Length=248, Percent_Identity=31.8548387096774, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI21357303, Length=252, Percent_Identity=29.7619047619048, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI21357957, Length=243, Percent_Identity=32.9218106995885, Blast_Score=124, Evalue=7e-29, Organism=Drosophila melanogaster, GI24664918, Length=223, Percent_Identity=35.4260089686099, Blast_Score=120, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28515; Mature: 28515
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLELQTAVKAAKAAGAITLSRFGELSHREIVAKEYKDFVTEVDKQCEATITATITESFP CCCCHHHHHHHHHHHCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCC DDGLLCEEGTSGSGASGRTWIVDPLDGTLNFIHSFPVFGISIAMRDASGELAVGVVYQPV CCCEEECCCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEEEEEEECCCCCEEEEHHHHHH LDELFTAVKGRGAFLNGKRISVSTREEMQSYLFATGLPFRDYDHYMDGYIGLLRDVIKDS HHHHHHHHCCCCCEECCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC AGIRRAGSASIDLAYTAAGRFDGFFEYRLFPWDFAAGVLLVREAGGIVTGIAGSDDVFAH CCCCCCCCCCEEEEEEECCCCCCEEEEEECCHHHHHHEEEEEECCCEEEECCCCCCHHHH TSILAGSPLTHPLLLEKARRHFGA HHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNLELQTAVKAAKAAGAITLSRFGELSHREIVAKEYKDFVTEVDKQCEATITATITESFP CCCCHHHHHHHHHHHCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCC DDGLLCEEGTSGSGASGRTWIVDPLDGTLNFIHSFPVFGISIAMRDASGELAVGVVYQPV CCCEEECCCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEEEEEEECCCCCEEEEHHHHHH LDELFTAVKGRGAFLNGKRISVSTREEMQSYLFATGLPFRDYDHYMDGYIGLLRDVIKDS HHHHHHHHCCCCCEECCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC AGIRRAGSASIDLAYTAAGRFDGFFEYRLFPWDFAAGVLLVREAGGIVTGIAGSDDVFAH CCCCCCCCCCEEEEEEECCCCCCEEEEEECCHHHHHHEEEEEECCCEEEECCCCCCHHHH TSILAGSPLTHPLLLEKARRHFGA HHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]