| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is leuS [H]
Identifier: 21674468
GI number: 21674468
Start: 1561714
End: 1564137
Strand: Direct
Name: leuS [H]
Synonym: CT1650
Alternate gene names: 21674468
Gene position: 1561714-1564137 (Clockwise)
Preceding gene: 21674467
Following gene: 229026532
Centisome position: 72.47
GC content: 59.69
Gene sequence:
>2424_bases ATGAAATACGACTTTTCAGCTTTAGAGAAAAAGTGGCAGTCCCGTTGGGCAGATGAGCAGACCTTTGCCTCCTCCGCCGA CCAAGAGAAGCCAAAATATTACGTGCTCGACATGTTCCCCTATCCGAGCGGTTCGGGACTGCACGTCGGCCACCTCGAAG GCTATACGGCCACCGACATCATGGCGCGCTACAAGCGCTGCCAAGGCCACAACGTGCTGCACCCGATGGGCTGGGACGCC TTCGGCCTGCCCGCCGAGCAGTTCGCCATCAAGACCGGCACCCACCCGCGCCTGACAACCGAAAAGAACGTCGCCAGCTT CCGGGAGACCCTCAAGAGCATGGGCTTCTCCTACGACTGGAGCCGCGAGATCAACACCACCGACCCGAACTACTTCAAGT GGACGCAGTGGATTTTCCTCAAGCTCTACGAAAAAGGGCTAGCCTACATCTCGGAGGTGGACGTCAACTGGTGCGAAGAG CTGAAAGTGGTGCTGGCCAACGAAGAGGTGGACGAGAAAATCGCTGACGGCTACACTGTGGTGCGCCGCCCACTGCGCCA GTGGGTGCTGAAGATCACCGCCTACGCCGAGCGGCTGCTGAAGGATCTGGACGAGGTTGACTGGCCGGAGAACGTCAAGC AGATGCAGCGCAACTGGATCGGGCGCTCTGAGGGCATGGAGATCGACTTCGAGCTGCGGTGCCACCGCACCAACCTGCGG GTCTATACCACCCGTCCGGACACGCTTTTTGGCGCGACGTATCTCGTCATTTCGCCGGAGCACCCGATGGCCGAAAAGCT CGCCATCGCCCAGCAGCTCGTCGCGGTCAAAAAATATATCGAACAGGCGAAGCTCAAAACCGAGCTGGAGCGTACCGGTT TGCAGAAAGAAAAAACCGGCGTCTTCACCGGCTCCTACGCGATCAATCCGGCCAACGGCGAGGCGCTGCCGGTCTGGATT TCGGACTTCGTGCTCACCAGCTACGGCACCGGCGCGATCATGTCCGTCCCGGCGCACGACAGCCGCGACTGGGAGTTCGC AAAAAAATTCGGCCTGCCGATCCGCGAAGTCATCAAAAGCCCGCATGACGTGCAGGAGAGGGTGTTTGACGGCAAGGAGA GCGTTTGCGTGAACTCCGCGAACGACGAAATCAGCATCAACGGCCTCGACTTCAAAACCGCCTTCGACCGCATGGCCGCC TGGCTGGAGTCGAAAGGCAAGGGCAAACGCAAGGTCAACTACAAGTTGCGCGACTGGGTCTTCAGCCGCCAGCGCTACTG GGGCGAGCCAATCCCGATCAAGCATTACGAAGACGGCACGATGCGCCCCGAAACCAACCTGCCGCTTACGCTTCCGGAGG TCGAAGCTTACCAGCCCACCTCGACTGGCGAGTCGCCGCTGGCCAACATCGAGAGCTGGCTCTACGGCGAGGACGAACAT GGAAAGTTCCGCCGCGAGACCAACACCATGCCGCAGTGGGCTGGAAGCTGCTGGTACTACCTACGCTTCATCGATCCGCA GAACAGCGACGCGCTGGTCGATCCGTCGCTCGAACAGTACTGGATGAACGTCGATCTCTACATCGGCGGCGCGGAGCACG CAGTGCTGCACCTGCTCTACTCACGCTTCTGGCACAAGGTGCTCTACGACCTCGGCGTGGTGAGCACCAAAGAGCCGTTC CAGCGCCTCTTCAACCAGGGCATGATTCTCGGCGAAGACAACGAAAAGATGTCCAAATCGCGCGGCAACGTCATCCCCGC CGACCACGTGCTGAGCACCTACGGCGCGGACGCACTGAGGCTCTACGAAATGTTCCTCGGCCCGCTTGACCAGGTCAAGC CCTGGAACACCCACGGCATCGAAGGCATCAGCCGCTTTTTGAACAAGGTGTGGCGACTGGTCTGGGACGAAAACACCGAG ACGCAGAAAACCACCGAGGACAAACCGTCGGAAGCCATCCTCAAACGGATGCACAAAGCGATCAAAAAGGTGACCGAAGA TACCGAGCAGCTCAAATTCAACACCGCCATTTCGGAGATGATGGTACTGGTCAACGAGCTGCACAAGGCGGGCTGCTACA GCCGCGAGACGACTGAAACCCTGCTGGTGCTGCTCTCACCTTTCGCACCGCACATCACCGAGGAGCTGTGGCAGGCGCTC GGCCACGCCGAATCGATCAGCGGAGCTGTATGGCCGGTCTTCGACGCGAAGCTTGCAACGGACGACGTGCTCACCATCGC CGTGCAGGTCAACGGCAAGCTCCGCGGTACGTTTGAAGCTCCCGCGGGCTGCACGAAAGAGGAGATGATCGAGTCGGCCA AAAAGGTCGAAAGCGTTGCGAAGTTCCTCGACGGGCAGCAGATCGTCAAGGAGATCGCCGTGCCCGGCAAGCTAGTGAAC TTCGCCGTAAAACCGCAACAATGA
Upstream 100 bases:
>100_bases GAAACCAAGGCAGTGCGGGGGAAATAACCCTGCACTGCCTTTTTTCATTACCGGCGCGGGATTATCTTCCCGGCAACATT TTCGAACAGACCAACGACTC
Downstream 100 bases:
>100_bases CAACGAAGCGATGAGATGAGGTTCTTAGTGTGATCAATTTTTTTCTGTAACTTCTTAATCACGATAATACAAGGGGTTCG GCAGGCCCCTTACCAAGCTC
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MKYDFSALEKKWQSRWADEQTFASSADQEKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIMARYKRCQGHNVLHPMGWDA FGLPAEQFAIKTGTHPRLTTEKNVASFRETLKSMGFSYDWSREINTTDPNYFKWTQWIFLKLYEKGLAYISEVDVNWCEE LKVVLANEEVDEKIADGYTVVRRPLRQWVLKITAYAERLLKDLDEVDWPENVKQMQRNWIGRSEGMEIDFELRCHRTNLR VYTTRPDTLFGATYLVISPEHPMAEKLAIAQQLVAVKKYIEQAKLKTELERTGLQKEKTGVFTGSYAINPANGEALPVWI SDFVLTSYGTGAIMSVPAHDSRDWEFAKKFGLPIREVIKSPHDVQERVFDGKESVCVNSANDEISINGLDFKTAFDRMAA WLESKGKGKRKVNYKLRDWVFSRQRYWGEPIPIKHYEDGTMRPETNLPLTLPEVEAYQPTSTGESPLANIESWLYGEDEH GKFRRETNTMPQWAGSCWYYLRFIDPQNSDALVDPSLEQYWMNVDLYIGGAEHAVLHLLYSRFWHKVLYDLGVVSTKEPF QRLFNQGMILGEDNEKMSKSRGNVIPADHVLSTYGADALRLYEMFLGPLDQVKPWNTHGIEGISRFLNKVWRLVWDENTE TQKTTEDKPSEAILKRMHKAIKKVTEDTEQLKFNTAISEMMVLVNELHKAGCYSRETTETLLVLLSPFAPHITEELWQAL GHAESISGAVWPVFDAKLATDDVLTIAVQVNGKLRGTFEAPAGCTKEEMIESAKKVESVAKFLDGQQIVKEIAVPGKLVN FAVKPQQ
Sequences:
>Translated_807_residues MKYDFSALEKKWQSRWADEQTFASSADQEKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIMARYKRCQGHNVLHPMGWDA FGLPAEQFAIKTGTHPRLTTEKNVASFRETLKSMGFSYDWSREINTTDPNYFKWTQWIFLKLYEKGLAYISEVDVNWCEE LKVVLANEEVDEKIADGYTVVRRPLRQWVLKITAYAERLLKDLDEVDWPENVKQMQRNWIGRSEGMEIDFELRCHRTNLR VYTTRPDTLFGATYLVISPEHPMAEKLAIAQQLVAVKKYIEQAKLKTELERTGLQKEKTGVFTGSYAINPANGEALPVWI SDFVLTSYGTGAIMSVPAHDSRDWEFAKKFGLPIREVIKSPHDVQERVFDGKESVCVNSANDEISINGLDFKTAFDRMAA WLESKGKGKRKVNYKLRDWVFSRQRYWGEPIPIKHYEDGTMRPETNLPLTLPEVEAYQPTSTGESPLANIESWLYGEDEH GKFRRETNTMPQWAGSCWYYLRFIDPQNSDALVDPSLEQYWMNVDLYIGGAEHAVLHLLYSRFWHKVLYDLGVVSTKEPF QRLFNQGMILGEDNEKMSKSRGNVIPADHVLSTYGADALRLYEMFLGPLDQVKPWNTHGIEGISRFLNKVWRLVWDENTE TQKTTEDKPSEAILKRMHKAIKKVTEDTEQLKFNTAISEMMVLVNELHKAGCYSRETTETLLVLLSPFAPHITEELWQAL GHAESISGAVWPVFDAKLATDDVLTIAVQVNGKLRGTFEAPAGCTKEEMIESAKKVESVAKFLDGQQIVKEIAVPGKLVN FAVKPQQ >Mature_807_residues MKYDFSALEKKWQSRWADEQTFASSADQEKPKYYVLDMFPYPSGSGLHVGHLEGYTATDIMARYKRCQGHNVLHPMGWDA FGLPAEQFAIKTGTHPRLTTEKNVASFRETLKSMGFSYDWSREINTTDPNYFKWTQWIFLKLYEKGLAYISEVDVNWCEE LKVVLANEEVDEKIADGYTVVRRPLRQWVLKITAYAERLLKDLDEVDWPENVKQMQRNWIGRSEGMEIDFELRCHRTNLR VYTTRPDTLFGATYLVISPEHPMAEKLAIAQQLVAVKKYIEQAKLKTELERTGLQKEKTGVFTGSYAINPANGEALPVWI SDFVLTSYGTGAIMSVPAHDSRDWEFAKKFGLPIREVIKSPHDVQERVFDGKESVCVNSANDEISINGLDFKTAFDRMAA WLESKGKGKRKVNYKLRDWVFSRQRYWGEPIPIKHYEDGTMRPETNLPLTLPEVEAYQPTSTGESPLANIESWLYGEDEH GKFRRETNTMPQWAGSCWYYLRFIDPQNSDALVDPSLEQYWMNVDLYIGGAEHAVLHLLYSRFWHKVLYDLGVVSTKEPF QRLFNQGMILGEDNEKMSKSRGNVIPADHVLSTYGADALRLYEMFLGPLDQVKPWNTHGIEGISRFLNKVWRLVWDENTE TQKTTEDKPSEAILKRMHKAIKKVTEDTEQLKFNTAISEMMVLVNELHKAGCYSRETTETLLVLLSPFAPHITEELWQAL GHAESISGAVWPVFDAKLATDDVLTIAVQVNGKLRGTFEAPAGCTKEEMIESAKKVESVAKFLDGQQIVKEIAVPGKLVN FAVKPQQ
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=880, Percent_Identity=33.5227272727273, Blast_Score=443, Evalue=1e-124, Organism=Homo sapiens, GI94721239, Length=165, Percent_Identity=28.4848484848485, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI94721241, Length=165, Percent_Identity=28.4848484848485, Blast_Score=67, Evalue=6e-11, Organism=Escherichia coli, GI1786861, Length=869, Percent_Identity=42.0023014959724, Blast_Score=644, Evalue=0.0, Organism=Caenorhabditis elegans, GI71997517, Length=802, Percent_Identity=28.6783042394015, Blast_Score=280, Evalue=2e-75, Organism=Caenorhabditis elegans, GI71997510, Length=802, Percent_Identity=28.6783042394015, Blast_Score=280, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17510661, Length=869, Percent_Identity=21.6340621403913, Blast_Score=120, Evalue=4e-27, Organism=Caenorhabditis elegans, GI212645227, Length=316, Percent_Identity=26.5822784810127, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17541896, Length=213, Percent_Identity=25.8215962441315, Blast_Score=67, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323414, Length=811, Percent_Identity=34.2786683107275, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6321531, Length=497, Percent_Identity=21.7303822937626, Blast_Score=82, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6325217, Length=357, Percent_Identity=24.0896358543417, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6319395, Length=193, Percent_Identity=26.9430051813472, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI21355409, Length=856, Percent_Identity=31.3084112149533, Blast_Score=358, Evalue=9e-99, Organism=Drosophila melanogaster, GI17864482, Length=877, Percent_Identity=23.1470923603193, Blast_Score=120, Evalue=5e-27, Organism=Drosophila melanogaster, GI24653289, Length=877, Percent_Identity=23.1470923603193, Blast_Score=120, Evalue=5e-27, Organism=Drosophila melanogaster, GI28574730, Length=166, Percent_Identity=29.5180722891566, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24668547, Length=166, Percent_Identity=29.5180722891566, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24668543, Length=166, Percent_Identity=29.5180722891566, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 92479; Mature: 92479
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYDFSALEKKWQSRWADEQTFASSADQEKPKYYVLDMFPYPSGSGLHVGHLEGYTATDI CCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHHHH MARYKRCQGHNVLHPMGWDAFGLPAEQFAIKTGTHPRLTTEKNVASFRETLKSMGFSYDW HHHHHHHCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC SREINTTDPNYFKWTQWIFLKLYEKGLAYISEVDVNWCEELKVVLANEEVDEKIADGYTV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCHHH VRRPLRQWVLKITAYAERLLKDLDEVDWPENVKQMQRNWIGRSEGMEIDFELRCHRTNLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCEE VYTTRPDTLFGATYLVISPEHPMAEKLAIAQQLVAVKKYIEQAKLKTELERTGLQKEKTG EEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC VFTGSYAINPANGEALPVWISDFVLTSYGTGAIMSVPAHDSRDWEFAKKFGLPIREVIKS EEECCEEECCCCCCEEEEEHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHCCCHHHHHCC PHDVQERVFDGKESVCVNSANDEISINGLDFKTAFDRMAAWLESKGKGKRKVNYKLRDWV CHHHHHHHHCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEECHHHHHHH FSRQRYWGEPIPIKHYEDGTMRPETNLPLTLPEVEAYQPTSTGESPLANIESWLYGEDEH HHHHHHCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCC GKFRRETNTMPQWAGSCWYYLRFIDPQNSDALVDPSLEQYWMNVDLYIGGAEHAVLHLLY CCHHHHCCCCCCCCCCEEEEEEEECCCCCCCEECCCHHHHEEEEEEEECCHHHHHHHHHH SRFWHKVLYDLGVVSTKEPFQRLFNQGMILGEDNEKMSKSRGNVIPADHVLSTYGADALR HHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCCCHHHHHHCCCCCCHHHHHHHHCHHHHH LYEMFLGPLDQVKPWNTHGIEGISRFLNKVWRLVWDENTETQKTTEDKPSEAILKRMHKA HHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH IKKVTEDTEQLKFNTAISEMMVLVNELHKAGCYSRETTETLLVLLSPFAPHITEELWQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH GHAESISGAVWPVFDAKLATDDVLTIAVQVNGKLRGTFEAPAGCTKEEMIESAKKVESVA CCHHHCCCCCCCHHCCHHCCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHH KFLDGQQIVKEIAVPGKLVNFAVKPQQ HHHCHHHHHHHHCCCCCEEEEEECCCC >Mature Secondary Structure MKYDFSALEKKWQSRWADEQTFASSADQEKPKYYVLDMFPYPSGSGLHVGHLEGYTATDI CCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHHHH MARYKRCQGHNVLHPMGWDAFGLPAEQFAIKTGTHPRLTTEKNVASFRETLKSMGFSYDW HHHHHHHCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC SREINTTDPNYFKWTQWIFLKLYEKGLAYISEVDVNWCEELKVVLANEEVDEKIADGYTV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCHHH VRRPLRQWVLKITAYAERLLKDLDEVDWPENVKQMQRNWIGRSEGMEIDFELRCHRTNLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCEE VYTTRPDTLFGATYLVISPEHPMAEKLAIAQQLVAVKKYIEQAKLKTELERTGLQKEKTG EEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC VFTGSYAINPANGEALPVWISDFVLTSYGTGAIMSVPAHDSRDWEFAKKFGLPIREVIKS EEECCEEECCCCCCEEEEEHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHCCCHHHHHCC PHDVQERVFDGKESVCVNSANDEISINGLDFKTAFDRMAAWLESKGKGKRKVNYKLRDWV CHHHHHHHHCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEECHHHHHHH FSRQRYWGEPIPIKHYEDGTMRPETNLPLTLPEVEAYQPTSTGESPLANIESWLYGEDEH HHHHHHCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCC GKFRRETNTMPQWAGSCWYYLRFIDPQNSDALVDPSLEQYWMNVDLYIGGAEHAVLHLLY CCHHHHCCCCCCCCCCEEEEEEEECCCCCCCEECCCHHHHEEEEEEEECCHHHHHHHHHH SRFWHKVLYDLGVVSTKEPFQRLFNQGMILGEDNEKMSKSRGNVIPADHVLSTYGADALR HHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCCCHHHHHHCCCCCCHHHHHHHHCHHHHH LYEMFLGPLDQVKPWNTHGIEGISRFLNKVWRLVWDENTETQKTTEDKPSEAILKRMHKA HHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH IKKVTEDTEQLKFNTAISEMMVLVNELHKAGCYSRETTETLLVLLSPFAPHITEELWQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH GHAESISGAVWPVFDAKLATDDVLTIAVQVNGKLRGTFEAPAGCTKEEMIESAKKVESVA CCHHHCCCCCCCHHCCHHCCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHH KFLDGQQIVKEIAVPGKLVNFAVKPQQ HHHCHHHHHHHHCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA