| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is panC
Identifier: 21674465
GI number: 21674465
Start: 1558348
End: 1559202
Strand: Direct
Name: panC
Synonym: CT1647
Alternate gene names: 21674465
Gene position: 1558348-1559202 (Clockwise)
Preceding gene: 21674464
Following gene: 21674466
Centisome position: 72.31
GC content: 60.0
Gene sequence:
>855_bases ATGCAGATCATCAATGACCCCGCCGAGATGCAGAAGATCGCCGAAAAACTGCGTCTCCAGCACCAGTATATCGGCGTCGT CATGACGATGGGCGCGCTGCACGAGGGGCACCTGAGTCTGGTAAAACTTGCGAAAGCGCATGCCGGAACGGTCATTATGA CCATCTTCGTCAACCCGACGCAATTCGGCCCGAACGAAGATTTTTACCGTTATCCAAGACCCTTCGAACAGGACGCCGCG CTGGCGCGTTCGGCAGGCGTTGACTACCTGTTTGCGCCTTCGACGGAAGCGATGTACCCGGATGGATACTCGACCAGCAT CGATCCCGGCCCCATCGCCACGCGCTTCGAGGGCGCTTCCCGACCCGGCCACTTCGGCGGCATGGTTACGGTAGTGGTCA AACTGCTCGGCATCACGCGACCGCACCTGGCCGTCTTTGGCGAGAAGGACGCCCAGCAGCTCGCCATCATCCGGCGCGTG GTGACCGATCTGAACATCGGCACCACGATTCTCGGGGCTCCGATCGTGCGCGAAAGCGACGGGCTGGCCACCAGTTCGCG GAACATCTATCTCTCGTCGAACGAACGCCAGCAGGCAACGGTGCTTTACCGCGCCATCCGGTACGCGAAGATGGAGATCG ACAAAGACCGCACCGATCTAGAGGCGATTGCTGGCGAAGCTGAAGCGCTGGTGCGTTCCGAGCCTGATGCCGAACCCGAT TATCTCTGCTTTGTCGATGACGCCACTTTCGAGCCGGTCACGCAGGCGGTTACCGGCAAAGCCTACCGGCTCATCATGGC TGTGCGCATCGGTTCGACCAGGCTGATCGACAACTGGCGGTTTGACTATCAGTAA
Upstream 100 bases:
>100_bases CCCGATGAACTGGCGAACCACTTCACCGGCCAGAAGCAGCGGGGCGAATTCGTCGTGGTCGTCCATCCGCCAGACAAACA TTCAAAAAAGAGACAGGAAC
Downstream 100 bases:
>100_bases TGCACAAAAGCGGAACCGCATGAAAGCGCTGCCGATACTGAAAGGCAACAAATTTATAGTATATTATTTGACTTTGTAAT TTTTTGAATTGGCTTCGACC
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MQIINDPAEMQKIAEKLRLQHQYIGVVMTMGALHEGHLSLVKLAKAHAGTVIMTIFVNPTQFGPNEDFYRYPRPFEQDAA LARSAGVDYLFAPSTEAMYPDGYSTSIDPGPIATRFEGASRPGHFGGMVTVVVKLLGITRPHLAVFGEKDAQQLAIIRRV VTDLNIGTTILGAPIVRESDGLATSSRNIYLSSNERQQATVLYRAIRYAKMEIDKDRTDLEAIAGEAEALVRSEPDAEPD YLCFVDDATFEPVTQAVTGKAYRLIMAVRIGSTRLIDNWRFDYQ
Sequences:
>Translated_284_residues MQIINDPAEMQKIAEKLRLQHQYIGVVMTMGALHEGHLSLVKLAKAHAGTVIMTIFVNPTQFGPNEDFYRYPRPFEQDAA LARSAGVDYLFAPSTEAMYPDGYSTSIDPGPIATRFEGASRPGHFGGMVTVVVKLLGITRPHLAVFGEKDAQQLAIIRRV VTDLNIGTTILGAPIVRESDGLATSSRNIYLSSNERQQATVLYRAIRYAKMEIDKDRTDLEAIAGEAEALVRSEPDAEPD YLCFVDDATFEPVTQAVTGKAYRLIMAVRIGSTRLIDNWRFDYQ >Mature_284_residues MQIINDPAEMQKIAEKLRLQHQYIGVVMTMGALHEGHLSLVKLAKAHAGTVIMTIFVNPTQFGPNEDFYRYPRPFEQDAA LARSAGVDYLFAPSTEAMYPDGYSTSIDPGPIATRFEGASRPGHFGGMVTVVVKLLGITRPHLAVFGEKDAQQLAIIRRV VTDLNIGTTILGAPIVRESDGLATSSRNIYLSSNERQQATVLYRAIRYAKMEIDKDRTDLEAIAGEAEALVRSEPDAEPD YLCFVDDATFEPVTQAVTGKAYRLIMAVRIGSTRLIDNWRFDYQ
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family
Homologues:
Organism=Escherichia coli, GI1786325, Length=283, Percent_Identity=39.9293286219081, Blast_Score=199, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6322046, Length=280, Percent_Identity=33.9285714285714, Blast_Score=153, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PANC_CHLTE (Q8KBY5)
Other databases:
- EMBL: AE006470 - RefSeq: NP_662530.1 - ProteinModelPortal: Q8KBY5 - SMR: Q8KBY5 - GeneID: 1006779 - GenomeReviews: AE006470_GR - KEGG: cte:CT1647 - NMPDR: fig|194439.1.peg.1624 - TIGR: CT1647 - HOGENOM: HBG428839 - OMA: EDFGSYP - ProtClustDB: PRK00380 - BioCyc: CTEP194439:CT_1647-MONOMER - BRENDA: 6.3.2.1 - GO: GO:0005737 - HAMAP: MF_00158 - InterPro: IPR003721 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR21299:SF1 - TIGRFAMs: TIGR00018
Pfam domain/function: PF02569 Pantoate_ligase
EC number: =6.3.2.1
Molecular weight: Translated: 31471; Mature: 31471
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: ACT_SITE 37-37 BINDING 61-61 BINDING 61-61 BINDING 153-153 BINDING 176-176
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIINDPAEMQKIAEKLRLQHQYIGVVMTMGALHEGHLSLVKLAKAHAGTVIMTIFVNPT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCC QFGPNEDFYRYPRPFEQDAALARSAGVDYLFAPSTEAMYPDGYSTSIDPGPIATRFEGAS CCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPGHFGGMVTVVVKLLGITRPHLAVFGEKDAQQLAIIRRVVTDLNIGTTILGAPIVRESD CCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCEECCC GLATSSRNIYLSSNERQQATVLYRAIRYAKMEIDKDRTDLEAIAGEAEALVRSEPDAEPD CCEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC YLCFVDDATFEPVTQAVTGKAYRLIMAVRIGSTRLIDNWRFDYQ EEEEECCCCCCHHHHHHCCHHEEEEEEEEECCEEEEECCCCCCC >Mature Secondary Structure MQIINDPAEMQKIAEKLRLQHQYIGVVMTMGALHEGHLSLVKLAKAHAGTVIMTIFVNPT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCC QFGPNEDFYRYPRPFEQDAALARSAGVDYLFAPSTEAMYPDGYSTSIDPGPIATRFEGAS CCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPGHFGGMVTVVVKLLGITRPHLAVFGEKDAQQLAIIRRVVTDLNIGTTILGAPIVRESD CCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCEECCC GLATSSRNIYLSSNERQQATVLYRAIRYAKMEIDKDRTDLEAIAGEAEALVRSEPDAEPD CCEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC YLCFVDDATFEPVTQAVTGKAYRLIMAVRIGSTRLIDNWRFDYQ EEEEECCCCCCHHHHHHCCHHEEEEEEEEECCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901