Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674461

Identifier: 21674461

GI number: 21674461

Start: 1554001

End: 1554507

Strand: Direct

Name: 21674461

Synonym: CT1643

Alternate gene names: NA

Gene position: 1554001-1554507 (Clockwise)

Preceding gene: 21674459

Following gene: 21674464

Centisome position: 72.11

GC content: 58.38

Gene sequence:

>507_bases
GTGGATGACCCGGCAATCATGTGGAATGCGGGTAACATCAGGGGACGCCATCCGCAGCTTCGCCTCACCAAAGGGTTCAA
GAGCGGCGAAAAGAGCCGGGTCGAGGTCGCCGTGGCGGTAGCGAGAACGATTGGCGAAACAAACGTAAGCGGGGCGGATT
CCGGTAAAGACGCCACCATGCCTTCGATTCAGGGACATTTGGCTCTTTCAACGCACTCTTCGTCTCGGAGAAACCGGCAA
CCATCGCTGTTTCAGGCCATTACGAACAGGAGGAATGGGATACGGCGGCTAACGAAACGCATGAAACTCTCGACTCGTGG
TCATGCGTGCTCGAACTGTCGCTGCCACTGGGCAACAAGCTGCTTTTTGCCAGTGAGCTTTTCACCGGAGAGAATCTCGA
CGATTACCGGAAAGGCATCGGTCAGGGCCGCAACGGCACCAAAGCCATCCGTTCGCACGGAGGCTGGGCTGCCCTGCGCT
ACGCGGCAAGCCCGGAGACGACGTTGA

Upstream 100 bases:

>100_bases
GCCAGCCTCGAAAAAGAGCTTGCCGAGAGCTGAAGGCGCACACGACGTCAGCATCATCACCGGACAAACCTGGGGTCTGA
ACGGCTCTCTCATCCCGTTC

Downstream 100 bases:

>100_bases
GCATCGGCGCTGGCATGGATGATCCCGATGACGATGACGTGCTGTCGATAACCGGCCAAACACTGAACGAAACGCAGTTC
ATCTCGGTGATGCACCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MDDPAIMWNAGNIRGRHPQLRLTKGFKSGEKSRVEVAVAVARTIGETNVSGADSGKDATMPSIQGHLALSTHSSSRRNRQ
PSLFQAITNRRNGIRRLTKRMKLSTRGHACSNCRCHWATSCFLPVSFSPERISTITGKASVRAATAPKPSVRTEAGLPCA
TRQARRRR

Sequences:

>Translated_168_residues
MDDPAIMWNAGNIRGRHPQLRLTKGFKSGEKSRVEVAVAVARTIGETNVSGADSGKDATMPSIQGHLALSTHSSSRRNRQ
PSLFQAITNRRNGIRRLTKRMKLSTRGHACSNCRCHWATSCFLPVSFSPERISTITGKASVRAATAPKPSVRTEAGLPCA
TRQARRRR
>Mature_168_residues
MDDPAIMWNAGNIRGRHPQLRLTKGFKSGEKSRVEVAVAVARTIGETNVSGADSGKDATMPSIQGHLALSTHSSSRRNRQ
PSLFQAITNRRNGIRRLTKRMKLSTRGHACSNCRCHWATSCFLPVSFSPERISTITGKASVRAATAPKPSVRTEAGLPCA
TRQARRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18406; Mature: 18406

Theoretical pI: Translated: 12.25; Mature: 12.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDPAIMWNAGNIRGRHPQLRLTKGFKSGEKSRVEVAVAVARTIGETNVSGADSGKDATM
CCCCEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PSIQGHLALSTHSSSRRNRQPSLFQAITNRRNGIRRLTKRMKLSTRGHACSNCRCHWATS
CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECE
CFLPVSFSPERISTITGKASVRAATAPKPSVRTEAGLPCATRQARRRR
EEEECCCCHHHHHEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDDPAIMWNAGNIRGRHPQLRLTKGFKSGEKSRVEVAVAVARTIGETNVSGADSGKDATM
CCCCEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PSIQGHLALSTHSSSRRNRQPSLFQAITNRRNGIRRLTKRMKLSTRGHACSNCRCHWATS
CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECE
CFLPVSFSPERISTITGKASVRAATAPKPSVRTEAGLPCATRQARRRR
EEEECCCCHHHHHEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA