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The map label for this gene is recN [H]

Identifier: 21674436

GI number: 21674436

Start: 1522682

End: 1524388

Strand: Direct

Name: recN [H]

Synonym: CT1618

Alternate gene names: 21674436

Gene position: 1522682-1524388 (Clockwise)

Preceding gene: 21674434

Following gene: 21674441

Centisome position: 70.66

GC content: 61.57

Gene sequence:

>1707_bases
ATGCTCAAAAGCCTCTACGTCAGAGATTTCGCGCTTATCGACGAACTTTCGGTCAGTTTCGCGCCGGGCCTAACCATTAT
CACCGGCGAGACCGGCGCGGGCAAGTCGATTCTGATGGGTGCGCTGAACATGGTGCTCGGCGAGCGGGCAAGCGCGGAGG
TGGTGCGAGCCGGGGCGCGAAAGGCGGTGATCGAGGCGGTTTTCGGCGGCGAGCACTACGAGAACATCGGTGAAATGCTC
GACGAGGAGCAGATCGAACGCACACCGGAGCTGATTCTGCGGCGCGACATTTCCGCGACGGGCCAGTCGCGCTGCTTCAT
CAACGACACGCCCTGCACGGTTTCGCTACTCAAACGTGCCGGGAAGCAGCTCGTCGATCTGCACGGCCAGCACGACCACC
AGCTCCTCCTGCACACCGAAACCCATGCCGGGATGCTCGACGGCTTCGGTCTTTTGCACGCCGAGACCGCGCAATACCGG
AACACCCTCGAAGAGTATCGCAAGCTGCGCCACGAGCTGCAAAGCCTCAACGAACGAGCCGATATGCTCCGCAAAAAGCG
AGACTTCATCGACTACCAGTACAGGGAGCTCGACGCGGCAGCTCTCGTCGAAGGCGAGGAGCGCTCGATTGACGAGGAGA
TCAACCTGCTCGAAAACGCTGAAACGCTTTTCAACCTCGGCACGGCGTTGGGCGAACACCTCTACGCATCGGAAAGCTCG
GCCTACACGACACTCTCTTCGGCGGTGCATCTGCTCGAAAAGCTCAGCGCAATCGACAAGAGTTTCGAGCCATGGCTTGA
AGAGCTGCGCGGCGCGACGGCCACGGTTGAGGAGCTGAACCGCTTCGTCGGAAGCTACATCGACGGCATCGACTTCAACG
GCGACCGCCTCGAAGCGCTGCGCGAGCGGCAGATACTCTTGCAGCGGCTCGCCAAAAAGCACGGCAAGAGCATCGACGAA
CTGATCGCCCTGCGCGACCGCCTCGCCGAAGAGCTGTCGCTCGAAGAGAATCTGGCGGGCGAACTGACGACCATCGAAGC
CGAAATCCAGAAGGCGCGGAAAGCGCTCTCGGCGTCGGCGGAGACGCTCTCGGCGCATCGGCGCGAAGCCGCCGAGCGAC
TCGAACAGGAGATCATGACAGGCCTCGCAACGCTCGGCATTCCGCACAGCACCTTCGAGGTGCGCTTCACCCGTGAAGCC
TTGCCGGACGGCGACATCGAGATCGACGGCACGCGCTACCGGGCGTTCGACAACGGCTGCGACCGCATCGAGTTCATGAT
TTCAACCAACCTCGGTGAATCGCCGAAGCCGCTAGCCAAGGTGGCCTCCGGCGGCGAAATCTCGCGCGTGATGCTTGCCA
TGAAAAGCGCACTCGCCCGCTCGGCAGAACTGCCAATCCTCGTCTTCGACGAAATCGACACCGGCATCAGCGGCAAGGTA
GCACAGTCGGTCGGCTTCAGCCTCAAGCGCCTCTCTCGGATGCACCAGATCATTGCCATCACGCACCTCCCCCAGATTGC
CGCAATGAGCGACCTGCATCTGGCTGTCGTCAAACGCATCCAAGCCGACCGCACCCTCACCGGCGTCACCCCACTCGATA
AGGACGAACACGTACGCGAAGTAGCCCGCCTTTTCAGCGGTACAGAGATCACCGAAACCTCCCTCCAGCTCGCCGAAGAG
CTGATCGAAGCAGGAAGATCGGCGTGA

Upstream 100 bases:

>100_bases
AGTGCTGGCCCGGTAACGGCATGCCGTATTTTTCAATCACGCTTTTTTAGCGTTATCTTTGAAGCTGTCAACCCGCCGAA
CTTACATAACGCTCCGTCTC

Downstream 100 bases:

>100_bases
AACCTGAGAGCCACCTGGGAGCGCCGTCCCGAAAGCTTTCGGGATGGCATCTTTTTTTTCAGGATGACACCGCCCCCGTC
CCAACAACAGCCGATAGGTG

Product: recombination/replication protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MLKSLYVRDFALIDELSVSFAPGLTIITGETGAGKSILMGALNMVLGERASAEVVRAGARKAVIEAVFGGEHYENIGEML
DEEQIERTPELILRRDISATGQSRCFINDTPCTVSLLKRAGKQLVDLHGQHDHQLLLHTETHAGMLDGFGLLHAETAQYR
NTLEEYRKLRHELQSLNERADMLRKKRDFIDYQYRELDAAALVEGEERSIDEEINLLENAETLFNLGTALGEHLYASESS
AYTTLSSAVHLLEKLSAIDKSFEPWLEELRGATATVEELNRFVGSYIDGIDFNGDRLEALRERQILLQRLAKKHGKSIDE
LIALRDRLAEELSLEENLAGELTTIEAEIQKARKALSASAETLSAHRREAAERLEQEIMTGLATLGIPHSTFEVRFTREA
LPDGDIEIDGTRYRAFDNGCDRIEFMISTNLGESPKPLAKVASGGEISRVMLAMKSALARSAELPILVFDEIDTGISGKV
AQSVGFSLKRLSRMHQIIAITHLPQIAAMSDLHLAVVKRIQADRTLTGVTPLDKDEHVREVARLFSGTEITETSLQLAEE
LIEAGRSA

Sequences:

>Translated_568_residues
MLKSLYVRDFALIDELSVSFAPGLTIITGETGAGKSILMGALNMVLGERASAEVVRAGARKAVIEAVFGGEHYENIGEML
DEEQIERTPELILRRDISATGQSRCFINDTPCTVSLLKRAGKQLVDLHGQHDHQLLLHTETHAGMLDGFGLLHAETAQYR
NTLEEYRKLRHELQSLNERADMLRKKRDFIDYQYRELDAAALVEGEERSIDEEINLLENAETLFNLGTALGEHLYASESS
AYTTLSSAVHLLEKLSAIDKSFEPWLEELRGATATVEELNRFVGSYIDGIDFNGDRLEALRERQILLQRLAKKHGKSIDE
LIALRDRLAEELSLEENLAGELTTIEAEIQKARKALSASAETLSAHRREAAERLEQEIMTGLATLGIPHSTFEVRFTREA
LPDGDIEIDGTRYRAFDNGCDRIEFMISTNLGESPKPLAKVASGGEISRVMLAMKSALARSAELPILVFDEIDTGISGKV
AQSVGFSLKRLSRMHQIIAITHLPQIAAMSDLHLAVVKRIQADRTLTGVTPLDKDEHVREVARLFSGTEITETSLQLAEE
LIEAGRSA
>Mature_568_residues
MLKSLYVRDFALIDELSVSFAPGLTIITGETGAGKSILMGALNMVLGERASAEVVRAGARKAVIEAVFGGEHYENIGEML
DEEQIERTPELILRRDISATGQSRCFINDTPCTVSLLKRAGKQLVDLHGQHDHQLLLHTETHAGMLDGFGLLHAETAQYR
NTLEEYRKLRHELQSLNERADMLRKKRDFIDYQYRELDAAALVEGEERSIDEEINLLENAETLFNLGTALGEHLYASESS
AYTTLSSAVHLLEKLSAIDKSFEPWLEELRGATATVEELNRFVGSYIDGIDFNGDRLEALRERQILLQRLAKKHGKSIDE
LIALRDRLAEELSLEENLAGELTTIEAEIQKARKALSASAETLSAHRREAAERLEQEIMTGLATLGIPHSTFEVRFTREA
LPDGDIEIDGTRYRAFDNGCDRIEFMISTNLGESPKPLAKVASGGEISRVMLAMKSALARSAELPILVFDEIDTGISGKV
AQSVGFSLKRLSRMHQIIAITHLPQIAAMSDLHLAVVKRIQADRTLTGVTPLDKDEHVREVARLFSGTEITETSLQLAEE
LIEAGRSA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=569, Percent_Identity=36.0281195079086, Blast_Score=304, Evalue=1e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62980; Mature: 62980

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSLYVRDFALIDELSVSFAPGLTIITGETGAGKSILMGALNMVLGERASAEVVRAGAR
CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
KAVIEAVFGGEHYENIGEMLDEEQIERTPELILRRDISATGQSRCFINDTPCTVSLLKRA
HHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHH
GKQLVDLHGQHDHQLLLHTETHAGMLDGFGLLHAETAQYRNTLEEYRKLRHELQSLNERA
HHHHHHHCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMLRKKRDFIDYQYRELDAAALVEGEERSIDEEINLLENAETLFNLGTALGEHLYASESS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AYTTLSSAVHLLEKLSAIDKSFEPWLEELRGATATVEELNRFVGSYIDGIDFNGDRLEAL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RERQILLQRLAKKHGKSIDELIALRDRLAEELSLEENLAGELTTIEAEIQKARKALSASA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ETLSAHRREAAERLEQEIMTGLATLGIPHSTFEVRFTREALPDGDIEIDGTRYRAFDNGC
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCEEECCCEEECCCCCC
DRIEFMISTNLGESPKPLAKVASGGEISRVMLAMKSALARSAELPILVFDEIDTGISGKV
CCEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH
AQSVGFSLKRLSRMHQIIAITHLPQIAAMSDLHLAVVKRIQADRTLTGVTPLDKDEHVRE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
VARLFSGTEITETSLQLAEELIEAGRSA
HHHHHCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLKSLYVRDFALIDELSVSFAPGLTIITGETGAGKSILMGALNMVLGERASAEVVRAGAR
CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
KAVIEAVFGGEHYENIGEMLDEEQIERTPELILRRDISATGQSRCFINDTPCTVSLLKRA
HHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHH
GKQLVDLHGQHDHQLLLHTETHAGMLDGFGLLHAETAQYRNTLEEYRKLRHELQSLNERA
HHHHHHHCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMLRKKRDFIDYQYRELDAAALVEGEERSIDEEINLLENAETLFNLGTALGEHLYASESS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AYTTLSSAVHLLEKLSAIDKSFEPWLEELRGATATVEELNRFVGSYIDGIDFNGDRLEAL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RERQILLQRLAKKHGKSIDELIALRDRLAEELSLEENLAGELTTIEAEIQKARKALSASA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ETLSAHRREAAERLEQEIMTGLATLGIPHSTFEVRFTREALPDGDIEIDGTRYRAFDNGC
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCEEECCCEEECCCCCC
DRIEFMISTNLGESPKPLAKVASGGEISRVMLAMKSALARSAELPILVFDEIDTGISGKV
CCEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH
AQSVGFSLKRLSRMHQIIAITHLPQIAAMSDLHLAVVKRIQADRTLTGVTPLDKDEHVRE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
VARLFSGTEITETSLQLAEELIEAGRSA
HHHHHCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]