| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yhaI [H]
Identifier: 21674398
GI number: 21674398
Start: 1489741
End: 1490115
Strand: Direct
Name: yhaI [H]
Synonym: CT1580
Alternate gene names: 21674398
Gene position: 1489741-1490115 (Clockwise)
Preceding gene: 21674397
Following gene: 21674400
Centisome position: 69.13
GC content: 35.73
Gene sequence:
>375_bases ATGAACTGGTATTTACAAGTTTTGAAAAAGTATGCTGAATTCAACGGCAGAGCAAGAAGAAAAGAATATTGGATGTTTGC ACTATTCAACATCATTTTCTTAATTGCTGCAATGATTATTGACAATATTGCGGGAACAACAATCGGTGTGTTACCTTATG GTTTATTCTATTTTGTTTATGCACTTGCTGTTTTTATTCCAGGTTTAGCAGTCGGTGTAAGAAGACTTCATGATGTTGGA AAAAGTGGGTGGTTTTACTTAATCATTTTAATTCCTATTGTTGGCGCTATTTGGCTTTTGGTTCTTTTCTGCACAGACGG GGTTGTCGGACAGAATGAATACGGTATAAACCCGAAAGAAGTTGCTACTAACTAA
Upstream 100 bases:
>100_bases TTTAGACTATAAAATAATAAATGTGGAGTCCAGAAACCACAAGAAAAACGGGGCGATACCGAAAAGCCTTACGAGTAGGA AAACAAAAAAATCAAACTCA
Downstream 100 bases:
>100_bases AAGAAAACCAGCCCATAACAAAGGCTATAAAATAATGGCGGGTGAAGTACATAATTGAAAGCTCGTAACCCGCACCAGCA TTGGTGTTGGTTGACAGCGG
Product: aminopeptidase C, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNWYLQVLKKYAEFNGRARRKEYWMFALFNIIFLIAAMIIDNIAGTTIGVLPYGLFYFVYALAVFIPGLAVGVRRLHDVG KSGWFYLIILIPIVGAIWLLVLFCTDGVVGQNEYGINPKEVATN
Sequences:
>Translated_124_residues MNWYLQVLKKYAEFNGRARRKEYWMFALFNIIFLIAAMIIDNIAGTTIGVLPYGLFYFVYALAVFIPGLAVGVRRLHDVG KSGWFYLIILIPIVGAIWLLVLFCTDGVVGQNEYGINPKEVATN >Mature_124_residues MNWYLQVLKKYAEFNGRARRKEYWMFALFNIIFLIAAMIIDNIAGTTIGVLPYGLFYFVYALAVFIPGLAVGVRRLHDVG KSGWFYLIILIPIVGAIWLLVLFCTDGVVGQNEYGINPKEVATN
Specific function: Unknown
COG id: COG3152
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yhaH [H]
Homologues:
Organism=Escherichia coli, GI1789491, Length=120, Percent_Identity=50, Blast_Score=111, Evalue=2e-26, Organism=Escherichia coli, GI2367196, Length=119, Percent_Identity=45.3781512605042, Blast_Score=106, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008523 [H]
Pfam domain/function: PF05656 DUF805 [H]
EC number: NA
Molecular weight: Translated: 14070; Mature: 14070
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWYLQVLKKYAEFNGRARRKEYWMFALFNIIFLIAAMIIDNIAGTTIGVLPYGLFYFVY CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ALAVFIPGLAVGVRRLHDVGKSGWFYLIILIPIVGAIWLLVLFCTDGVVGQNEYGINPKE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH VATN HCCC >Mature Secondary Structure MNWYLQVLKKYAEFNGRARRKEYWMFALFNIIFLIAAMIIDNIAGTTIGVLPYGLFYFVY CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ALAVFIPGLAVGVRRLHDVGKSGWFYLIILIPIVGAIWLLVLFCTDGVVGQNEYGINPKE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH VATN HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]