| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674387
Identifier: 21674387
GI number: 21674387
Start: 1478636
End: 1479856
Strand: Direct
Name: 21674387
Synonym: CT1569
Alternate gene names: NA
Gene position: 1478636-1479856 (Clockwise)
Preceding gene: 21674381
Following gene: 21674388
Centisome position: 68.62
GC content: 50.2
Gene sequence:
>1221_bases ATGACCCAATGCCCAGTTTCAGGACTTTCGGTTACCGAAAAAGAACATTGGAGCTTCGAAAATCGCCAGGGCAACTATAC CAGAAAATACAGCCTGATCGGCAATGATATCATTCATGTGCAGGAACTGGCCAGCCAGGGTATCATTCCGGATCATCTGT ATTCCGCCGATTTCACATCACTGATTGGCGAGGAAAACCTCACCGGCAAGCCGGTGTTTATTATGATCGATTGTGAGCCC ATCATCGACCTCAAATTCTCATACAAAAGAGAGTTCACGAACCTGGTCACCGCCCAGGAGTCCGACCTCCGGCTTATTGT GCTTTATAATATCAAGCCATCCGTCAGGCTTCAGCTTGAAATGTTGCAAAGCCTGGCAACAGAGAAGCTGCCGGTCATGC TCCGCGAATCATACAAAGAGGCGGTAACCTCGATTCTCGATTTCAAATCAGGCAATGTTTCCAGTACCAAACCCGATGAC GGGTCAGACAAGGCTTTTAGAAATGCGTTCCTTGCCGAAGTGTCGAGAATACTCATGCTCAGGCAGTTCAGCCAGCTGGA AATATTCCCTCCTGAAAATCATGCATCATATCCCTATTTTGAAATTCTCGACATAATGCGCCGCGACCTGCAAGCTCTGG AAGAGGAGCATCAGCAGAGCATCGAAAGGATAGAACAAGAATGCCGGGTACTTCTTGCCAGCAAGAATTCGTTGCTCGAC GAGCAGATCGAGGTATGCAAAAGGAGCGAGCAGCGGTTCAAGGCAGAGGAGTCTGCACTGCTTTCCAGAATTGCCGCACT GGAGATCGAAGCCACCAGAATTTCAACGGCAAATGCCGAAAAAAACGCGGCTCTGCGCACGTTGTGCGAAATGATCGAGA AGATCAACATCGATCCGGCAACCATGGAGAAGATTTCAGCCCAATGCGCCACGCTCTTCGAAACCAGCGACCAGGCCGCG ATGATCAATACCGAACTTACTGAAACCGACTCCGTCTTCCTCTCCAAACTCCAGAAAAAGCACCCGAATCTCAATCAGAG AGAGCTCAGAATCAGCCTGATGATCAAGCTGGACTATCACTCACGCGACATCGCCAGGTCGCTCGGCCTGTCGACCAGGG GCATCGAAAGCATCCGGTACCGGCTGCACAAGAAAATCGGTCTCGACAAACACAACTCCCTCAAGACCTATCTTACGAAC CTGGCCACCGAATCGCTCTGA
Upstream 100 bases:
>100_bases TCACGTAAACAGTTTTTTAAGACCATACAATATCGGATATTTAAGTAGTTTGCATGGTATCCTGTAATTTTCATCTCCTC AATTCCTAAAGTCCCTCACC
Downstream 100 bases:
>100_bases GTCGCCAAGTGAAGCGCTGCATTCATGCATTTCCCGTTACCAAGCCGAAACATGCATGAATGCTGGCGAATGCTCACGGC AAAAAAAGTATCCCCTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MTQCPVSGLSVTEKEHWSFENRQGNYTRKYSLIGNDIIHVQELASQGIIPDHLYSADFTSLIGEENLTGKPVFIMIDCEP IIDLKFSYKREFTNLVTAQESDLRLIVLYNIKPSVRLQLEMLQSLATEKLPVMLRESYKEAVTSILDFKSGNVSSTKPDD GSDKAFRNAFLAEVSRILMLRQFSQLEIFPPENHASYPYFEILDIMRRDLQALEEEHQQSIERIEQECRVLLASKNSLLD EQIEVCKRSEQRFKAEESALLSRIAALEIEATRISTANAEKNAALRTLCEMIEKINIDPATMEKISAQCATLFETSDQAA MINTELTETDSVFLSKLQKKHPNLNQRELRISLMIKLDYHSRDIARSLGLSTRGIESIRYRLHKKIGLDKHNSLKTYLTN LATESL
Sequences:
>Translated_406_residues MTQCPVSGLSVTEKEHWSFENRQGNYTRKYSLIGNDIIHVQELASQGIIPDHLYSADFTSLIGEENLTGKPVFIMIDCEP IIDLKFSYKREFTNLVTAQESDLRLIVLYNIKPSVRLQLEMLQSLATEKLPVMLRESYKEAVTSILDFKSGNVSSTKPDD GSDKAFRNAFLAEVSRILMLRQFSQLEIFPPENHASYPYFEILDIMRRDLQALEEEHQQSIERIEQECRVLLASKNSLLD EQIEVCKRSEQRFKAEESALLSRIAALEIEATRISTANAEKNAALRTLCEMIEKINIDPATMEKISAQCATLFETSDQAA MINTELTETDSVFLSKLQKKHPNLNQRELRISLMIKLDYHSRDIARSLGLSTRGIESIRYRLHKKIGLDKHNSLKTYLTN LATESL >Mature_405_residues TQCPVSGLSVTEKEHWSFENRQGNYTRKYSLIGNDIIHVQELASQGIIPDHLYSADFTSLIGEENLTGKPVFIMIDCEPI IDLKFSYKREFTNLVTAQESDLRLIVLYNIKPSVRLQLEMLQSLATEKLPVMLRESYKEAVTSILDFKSGNVSSTKPDDG SDKAFRNAFLAEVSRILMLRQFSQLEIFPPENHASYPYFEILDIMRRDLQALEEEHQQSIERIEQECRVLLASKNSLLDE QIEVCKRSEQRFKAEESALLSRIAALEIEATRISTANAEKNAALRTLCEMIEKINIDPATMEKISAQCATLFETSDQAAM INTELTETDSVFLSKLQKKHPNLNQRELRISLMIKLDYHSRDIARSLGLSTRGIESIRYRLHKKIGLDKHNSLKTYLTNL ATESL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46414; Mature: 46282
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQCPVSGLSVTEKEHWSFENRQGNYTRKYSLIGNDIIHVQELASQGIIPDHLYSADFTS CCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHH LIGEENLTGKPVFIMIDCEPIIDLKFSYKREFTNLVTAQESDLRLIVLYNIKPSVRLQLE HHCCCCCCCCCEEEEEECCCEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHH MLQSLATEKLPVMLRESYKEAVTSILDFKSGNVSSTKPDDGSDKAFRNAFLAEVSRILML HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RQFSQLEIFPPENHASYPYFEILDIMRRDLQALEEEHQQSIERIEQECRVLLASKNSLLD HHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH EQIEVCKRSEQRFKAEESALLSRIAALEIEATRISTANAEKNAALRTLCEMIEKINIDPA HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHEEECCCCHHHHHHHHHHHHHHHCCCCHH TMEKISAQCATLFETSDQAAMINTELTETDSVFLSKLQKKHPNLNQRELRISLMIKLDYH HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHEEEEEEEEEECCC SRDIARSLGLSTRGIESIRYRLHKKIGLDKHNSLKTYLTNLATESL HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TQCPVSGLSVTEKEHWSFENRQGNYTRKYSLIGNDIIHVQELASQGIIPDHLYSADFTS CCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHH LIGEENLTGKPVFIMIDCEPIIDLKFSYKREFTNLVTAQESDLRLIVLYNIKPSVRLQLE HHCCCCCCCCCEEEEEECCCEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHH MLQSLATEKLPVMLRESYKEAVTSILDFKSGNVSSTKPDDGSDKAFRNAFLAEVSRILML HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RQFSQLEIFPPENHASYPYFEILDIMRRDLQALEEEHQQSIERIEQECRVLLASKNSLLD HHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH EQIEVCKRSEQRFKAEESALLSRIAALEIEATRISTANAEKNAALRTLCEMIEKINIDPA HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHEEECCCCHHHHHHHHHHHHHHHCCCCHH TMEKISAQCATLFETSDQAAMINTELTETDSVFLSKLQKKHPNLNQRELRISLMIKLDYH HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHEEEEEEEEEECCC SRDIARSLGLSTRGIESIRYRLHKKIGLDKHNSLKTYLTNLATESL HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA