Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674384

Identifier: 21674384

GI number: 21674384

Start: 1475789

End: 1477018

Strand: Reverse

Name: 21674384

Synonym: CT1566

Alternate gene names: NA

Gene position: 1477018-1475789 (Counterclockwise)

Preceding gene: 21674385

Following gene: 21674383

Centisome position: 68.54

GC content: 62.28

Gene sequence:

>1230_bases
ATGCAGGTCATCATTGTTGAAGACGAAAAAACGCTCCGCTTCTCGCCGCTCGCCGACCTGAAGCCGGTGTACGATCTCGT
GACCGGTTGCTTTTCGCTCCGTCAGCGTTTCGTCGAGGCCCTCGGCGCTCGGCAGAAGTTGACCTGGCACTTGCGCCGCC
ATATCGCGCCGTGGTTCGCGGAGGCCAATCCCGGCTCGGTGGTCAACCGTGTTCTGGAGGATGAGGTGCTGCTCGTCAAC
GGGCGACTCATCTGCGATGCGGCGGTGACGCAGTTCATCGACGCGCGCAAAATTGCGCCGGGCGAGGCGCTCATTCAGAA
CGGCAATCTTTTGTTTTGCCGCACCACGGCGGAGCCGCTTCATGTTTTGGAAACGGTGTTTCCGGATACCATCGATGGCA
TGGTGCTGGCCGGTGCGTTCTCGTGCGTCGAAGTTTCCGGGTTCCGTTTGATCGAGAATCTCTGGGATCCCGTGGCGATG
CATCCGGCGATGATGCGCGAGGACGGCGCGGCTCTGGCGCTCGGGCGGATCGAGGGCGAGGTGCACCCGTCGGCGATTCT
GGTCAATCCGTCCGCGATCACCGTCGAGAAAGGCGCGGAGGTCAAGGCTGGCGCGGTGCTCGATGCAAGCGACGGCTTTA
TCTATATCGGCGCGGGTGCGGTGGTAGAGCCGGTGGCGCTGCTGATGGAGAACGTGTACATTGCGCCGGGTGCGAGGGTG
AAGAGCGGCGCGCGGATTTACAGCAACGTCTGCATCGGCGGCGGCGCGAAGGCGGGCGGCGAGATCGAGGATTCGATCAT
GGAGCCGTTTTCGAACAAGCAGCACGACGGTTTCCTCGGCCACTCCTACATTTCGAGTTGGTGCAACCTTGGCGCGGGCA
CCGACACCTCCGACCTCAAGAACAACTACAGCCCGGTGAGCATCGAGACCGCGCACGGGAAAATGGCCACCGGCCAGCAG
TTTCTCGGCCTCTTGATGGGCGAGCACTCGAAATGCTCCATCGGCACCCGCTTCAACACCGGCACGGTGGTCGGCATCTC
GTCGAACATCTTCGGCAACGGAATGCCCGCGAAATACGTCCCCTCATTTAGCTGGGGCGACGGCAATCCCGGCACGGCAC
GGTACGAAGCCGACAAAGCCGTCGAGACTGCGAGAAAGGTGATGGCGCGCCGCAAGGTTGAGATGAGTGCCGCGTATGAG
GCGATGTTCAGAGCGGTGGCGGGGGAGTAG

Upstream 100 bases:

>100_bases
GGATGGCGAGGTGATCGAGAAGGTTGGCGGCGCAATCGCCATCACCGCCGAGCCGCTCGCGGTCGAGATGCTTTACGAGC
CATAACGAAAATCGATTCCC

Downstream 100 bases:

>100_bases
GAGTAACTTTGCTTCCATCTTATAACTCTTGCTGGCATTTTTTGCCTTATTTCGATTAAATTATCTCAAGTTTCCCCTTA
GTCAATCCGTAGCCCCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Sugar Phosphate Nucleotydyl Transferase; Sugar Phospate Transferase; Transferase Hexapeptide Repeat; Nucleotidyl Transferase; Transferase Hexapeptide Repeat Containing Protein; Sugar-1-Phosphate Guanyl Transferase; Hexapeptide Transferase Family Protein; Hexapeptide Repeat-Containing Protein

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MQVIIVEDEKTLRFSPLADLKPVYDLVTGCFSLRQRFVEALGARQKLTWHLRRHIAPWFAEANPGSVVNRVLEDEVLLVN
GRLICDAAVTQFIDARKIAPGEALIQNGNLLFCRTTAEPLHVLETVFPDTIDGMVLAGAFSCVEVSGFRLIENLWDPVAM
HPAMMREDGAALALGRIEGEVHPSAILVNPSAITVEKGAEVKAGAVLDASDGFIYIGAGAVVEPVALLMENVYIAPGARV
KSGARIYSNVCIGGGAKAGGEIEDSIMEPFSNKQHDGFLGHSYISSWCNLGAGTDTSDLKNNYSPVSIETAHGKMATGQQ
FLGLLMGEHSKCSIGTRFNTGTVVGISSNIFGNGMPAKYVPSFSWGDGNPGTARYEADKAVETARKVMARRKVEMSAAYE
AMFRAVAGE

Sequences:

>Translated_409_residues
MQVIIVEDEKTLRFSPLADLKPVYDLVTGCFSLRQRFVEALGARQKLTWHLRRHIAPWFAEANPGSVVNRVLEDEVLLVN
GRLICDAAVTQFIDARKIAPGEALIQNGNLLFCRTTAEPLHVLETVFPDTIDGMVLAGAFSCVEVSGFRLIENLWDPVAM
HPAMMREDGAALALGRIEGEVHPSAILVNPSAITVEKGAEVKAGAVLDASDGFIYIGAGAVVEPVALLMENVYIAPGARV
KSGARIYSNVCIGGGAKAGGEIEDSIMEPFSNKQHDGFLGHSYISSWCNLGAGTDTSDLKNNYSPVSIETAHGKMATGQQ
FLGLLMGEHSKCSIGTRFNTGTVVGISSNIFGNGMPAKYVPSFSWGDGNPGTARYEADKAVETARKVMARRKVEMSAAYE
AMFRAVAGE
>Mature_409_residues
MQVIIVEDEKTLRFSPLADLKPVYDLVTGCFSLRQRFVEALGARQKLTWHLRRHIAPWFAEANPGSVVNRVLEDEVLLVN
GRLICDAAVTQFIDARKIAPGEALIQNGNLLFCRTTAEPLHVLETVFPDTIDGMVLAGAFSCVEVSGFRLIENLWDPVAM
HPAMMREDGAALALGRIEGEVHPSAILVNPSAITVEKGAEVKAGAVLDASDGFIYIGAGAVVEPVALLMENVYIAPGARV
KSGARIYSNVCIGGGAKAGGEIEDSIMEPFSNKQHDGFLGHSYISSWCNLGAGTDTSDLKNNYSPVSIETAHGKMATGQQ
FLGLLMGEHSKCSIGTRFNTGTVVGISSNIFGNGMPAKYVPSFSWGDGNPGTARYEADKAVETARKVMARRKVEMSAAYE
AMFRAVAGE

Specific function: Unknown

COG id: COG1208

COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43895; Mature: 43895

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVIIVEDEKTLRFSPLADLKPVYDLVTGCFSLRQRFVEALGARQKLTWHLRRHIAPWFA
CEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHC
EANPGSVVNRVLEDEVLLVNGRLICDAAVTQFIDARKIAPGEALIQNGNLLFCRTTAEPL
CCCCHHHHHHHHCCCEEEECCEEEEHHHHHHHHHHHCCCCCHHHEECCCEEEEECCCCHH
HVLETVFPDTIDGMVLAGAFSCVEVSGFRLIENLWDPVAMHPAMMREDGAALALGRIEGE
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHCCCCEEEEEECCCC
VHPSAILVNPSAITVEKGAEVKAGAVLDASDGFIYIGAGAVVEPVALLMENVYIAPGARV
CCCCEEEECCCEEEEECCCCEECCEEEECCCCEEEEECCHHHHHHHHHHHCEEECCCCCC
KSGARIYSNVCIGGGAKAGGEIEDSIMEPFSNKQHDGFLGHSYISSWCNLGAGTDTSDLK
CCCCCEECCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHH
NNYSPVSIETAHGKMATGQQFLGLLMGEHSKCSIGTRFNTGTVVGISSNIFGNGMPAKYV
CCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCC
PSFSWGDGNPGTARYEADKAVETARKVMARRKVEMSAAYEAMFRAVAGE
CCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVIIVEDEKTLRFSPLADLKPVYDLVTGCFSLRQRFVEALGARQKLTWHLRRHIAPWFA
CEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHC
EANPGSVVNRVLEDEVLLVNGRLICDAAVTQFIDARKIAPGEALIQNGNLLFCRTTAEPL
CCCCHHHHHHHHCCCEEEECCEEEEHHHHHHHHHHHCCCCCHHHEECCCEEEEECCCCHH
HVLETVFPDTIDGMVLAGAFSCVEVSGFRLIENLWDPVAMHPAMMREDGAALALGRIEGE
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHCCCCEEEEEECCCC
VHPSAILVNPSAITVEKGAEVKAGAVLDASDGFIYIGAGAVVEPVALLMENVYIAPGARV
CCCCEEEECCCEEEEECCCCEECCEEEECCCCEEEEECCHHHHHHHHHHHCEEECCCCCC
KSGARIYSNVCIGGGAKAGGEIEDSIMEPFSNKQHDGFLGHSYISSWCNLGAGTDTSDLK
CCCCCEECCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHH
NNYSPVSIETAHGKMATGQQFLGLLMGEHSKCSIGTRFNTGTVVGISSNIFGNGMPAKYV
CCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCC
PSFSWGDGNPGTARYEADKAVETARKVMARRKVEMSAAYEAMFRAVAGE
CCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA