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The map label for this gene is ygdH [C]

Identifier: 21674382

GI number: 21674382

Start: 1474201

End: 1474845

Strand: Reverse

Name: ygdH [C]

Synonym: CT1564

Alternate gene names: 21674382

Gene position: 1474845-1474201 (Counterclockwise)

Preceding gene: 21674383

Following gene: 21674380

Centisome position: 68.44

GC content: 57.52

Gene sequence:

>645_bases
ATGGCCGATGGCTGGCGCGTATTCAAGATCATGGCGGAGTTTGTCAACGGCTTCGAGACCATGTCGCGCATCGGCCCGGC
GGTCACGGTGTTCGGCTCGACGCGGGTCAAAGAGGGAGACGCCGAGTACCAGCTTGGCGAAACGATGGGCAAGCTGCTCG
CCGAAACCGGATTCGCCGTTATCACCGGCGGCGGCCCCGGCGCAATGGAGGCGGCCAACAAAGGGGCGCAGAGCAAAGGC
GGCGCGTCGGTCGGCTTCAACATCAAACTGCCCAACCAGCAGCGCCCGAACCGCTACATCGATTACGACAAACTCGTCAC
CTTCGAGTACTTTTTCATCCGCAAGGTGATGTTCCTCAAATACTCGCAGGCATTCATCGTGCTGCCGGGCGGCTTTGGCA
CGCTCGACGAGCTGTCCGAAGCGATCACTCTCATCCAGACCGGCAAGAGCCAGAAATTTCCGGTGATCATGATGGTGGCT
GACTACTGGGGCGACTTCTACGGCTGGATCAAAAAACGGATGCTCGACGAGCACGGCTTCATCAGAGAGTCAGACCTCGA
CTTCATCTTCATCGAGGACGATCCTGCCAAGGTTATCGAAATCATCCTCAGCTTCTATCCCGAAGGGTACAGGATCAATT
TTTAG

Upstream 100 bases:

>100_bases
CAGCATGGCAGACCAGGAGTGCAAAAAACCGGGCTGGGCCGTTCCGCCGCCGAAGCCCTTCTCTTCCGAAGAGATTTCGC
TCCTGCCGGGCAGCGAGTTC

Downstream 100 bases:

>100_bases
TCTGGCGTCCCTTATTCCTTAAGACTCCGCATTACATCCCATTTTTTCCGATTTTTTTAACGGGGTAAAGATTTTTGGCG
CTGCGTTTTTTTATCAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MADGWRVFKIMAEFVNGFETMSRIGPAVTVFGSTRVKEGDAEYQLGETMGKLLAETGFAVITGGGPGAMEAANKGAQSKG
GASVGFNIKLPNQQRPNRYIDYDKLVTFEYFFIRKVMFLKYSQAFIVLPGGFGTLDELSEAITLIQTGKSQKFPVIMMVA
DYWGDFYGWIKKRMLDEHGFIRESDLDFIFIEDDPAKVIEIILSFYPEGYRINF

Sequences:

>Translated_214_residues
MADGWRVFKIMAEFVNGFETMSRIGPAVTVFGSTRVKEGDAEYQLGETMGKLLAETGFAVITGGGPGAMEAANKGAQSKG
GASVGFNIKLPNQQRPNRYIDYDKLVTFEYFFIRKVMFLKYSQAFIVLPGGFGTLDELSEAITLIQTGKSQKFPVIMMVA
DYWGDFYGWIKKRMLDEHGFIRESDLDFIFIEDDPAKVIEIILSFYPEGYRINF
>Mature_213_residues
ADGWRVFKIMAEFVNGFETMSRIGPAVTVFGSTRVKEGDAEYQLGETMGKLLAETGFAVITGGGPGAMEAANKGAQSKGG
ASVGFNIKLPNQQRPNRYIDYDKLVTFEYFFIRKVMFLKYSQAFIVLPGGFGTLDELSEAITLIQTGKSQKFPVIMMVAD
YWGDFYGWIKKRMLDEHGFIRESDLDFIFIEDDPAKVIEIILSFYPEGYRINF

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24063; Mature: 23932

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGWRVFKIMAEFVNGFETMSRIGPAVTVFGSTRVKEGDAEYQLGETMGKLLAETGFAV
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHCCCEE
ITGGGPGAMEAANKGAQSKGGASVGFNIKLPNQQRPNRYIDYDKLVTFEYFFIRKVMFLK
EECCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHE
YSQAFIVLPGGFGTLDELSEAITLIQTGKSQKFPVIMMVADYWGDFYGWIKKRMLDEHGF
ECCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCC
IRESDLDFIFIEDDPAKVIEIILSFYPEGYRINF
EEECCCCEEEECCCHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
ADGWRVFKIMAEFVNGFETMSRIGPAVTVFGSTRVKEGDAEYQLGETMGKLLAETGFAV
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHCCCEE
ITGGGPGAMEAANKGAQSKGGASVGFNIKLPNQQRPNRYIDYDKLVTFEYFFIRKVMFLK
EECCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHE
YSQAFIVLPGGFGTLDELSEAITLIQTGKSQKFPVIMMVADYWGDFYGWIKKRMLDEHGF
ECCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCC
IRESDLDFIFIEDDPAKVIEIILSFYPEGYRINF
EEECCCCEEEECCCHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA