Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674378

Identifier: 21674378

GI number: 21674378

Start: 1471881

End: 1473125

Strand: Reverse

Name: 21674378

Synonym: CT1560

Alternate gene names: NA

Gene position: 1473125-1471881 (Counterclockwise)

Preceding gene: 21674379

Following gene: 21674377

Centisome position: 68.36

GC content: 57.35

Gene sequence:

>1245_bases
ATGTCAGGAAGCAGCAAAACAGTAAAAACCGGTTCAGCGCCAGCCGGTTTCAGGGACGCGGCGCTTTTCACTTTTGTTGC
GATTCTGGCCGGATTCGGCATTGAGCTGCTCACCTCGGGCGGCGGGATTAATGTTCCGGGCTGGCCGTTCAACCTTGTTT
TTCTGCTTCTTTTCGGAGCAGTGATTTTTACGGTTGGACTTATGTTCAGGGAGCATCCGGTGGTTTCGTGGCTTGGCGGC
ATTCCGCTCGGGCTGAGCCTGATCGTCGGCCTCGCGCTGCTTTCGCTGGTTGGCGGCGTCTTGCCGCAGGACAAGTATCC
GCCCGATTCGATCGTGGCGCTTCTGCGGCTGAACGGAATGTTTTCGAGCTGGCCTTTCGCCTTTGTCACCCTTTTGTTTC
TGTTCAATCTCGGCCTTTCTCTGGTCTGGAAGACCATTCCGTTCAGAGTGGCCAACCTCCAGTTCATGCTCTTTCACGGA
GGATTCTGGCTTGCGCTCTCCTGCGGCCTGCTTGGCACGGCGCAGCTGGAACGCCTGGTGGTGCCGCTGTATGAGGGCAA
GGAGAGCGATGTGGCTTACAATCGTGAATCCGAGACGGCGATTCATCTTCCCTTTTCCATCTACCTGAAAGATTTTCAGA
TCGACGAGTATACACCTCAGTTCGCCTTGTACGATCCGCAGAAAGACCAGGTTATCGAGCCGAAATCGAAACTCATGCCC
GAGCTTCGCAAGGGGGTGAAGGCCGAGTGGGCGGGGATCGGTTCGGTGACGGTGCTCGACTATCTGCCCGACGCGCTGCC
CGATGCAAACGGCACGCCGGTACCGGTGGAGGGCAAGAAAGGGGTGCCTTTCGCCAAGGTGAGAATCGATGAAAACGGCA
AGATTTCGGAGCAATGGATCAGCTCGGGCGGGCCACAGCTCAAGCCGCGCTTCGTTCCAATGGGCAACGCTTTCATCGTG
ATGGCCGACGGCGCACCCAAGGCGTTCCGCTCGGATGTGACGCTGATTGGCGCGGGGGGCGAGCGCAAGGCGGGGACGCT
CGAAGTGAACAAGCCGGTCGATTTTCACGGCTGGAAACTCTATCAGGTCGGTTACGACGAAAAGGCCGGGCGCTGGTCAA
CCCTGAGCCTGGTCGAGGCGGTCAGGGACCCTTGGCTGCCGGCGGTCTATCTTGGATTCTTCATGATTATGGCTGGCAAC
GTTTTGTATTTCTGGAAAGGCTTTAAAAAGATGGAGGAGGCATGA

Upstream 100 bases:

>100_bases
AGTTGTACTCCATTGTTTGCAACTGTTGTCAGATATTGAAGAACGATGATAAGGAGATTGGTGGTAGCAGTTATGGTGAT
AAAACAGCAGGTTAAGTTGT

Downstream 100 bases:

>100_bases
CCCTGGTAGAATTTCCGGCAATAACCTTCGCGGCGGTTGTGTGCTGGGCGGTAGGGAGCCTCTTGCAGATTCCGGCGAAA
AACTCCAAAGTGTCAGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSGSSKTVKTGSAPAGFRDAALFTFVAILAGFGIELLTSGGGINVPGWPFNLVFLLLFGAVIFTVGLMFREHPVVSWLGG
IPLGLSLIVGLALLSLVGGVLPQDKYPPDSIVALLRLNGMFSSWPFAFVTLLFLFNLGLSLVWKTIPFRVANLQFMLFHG
GFWLALSCGLLGTAQLERLVVPLYEGKESDVAYNRESETAIHLPFSIYLKDFQIDEYTPQFALYDPQKDQVIEPKSKLMP
ELRKGVKAEWAGIGSVTVLDYLPDALPDANGTPVPVEGKKGVPFAKVRIDENGKISEQWISSGGPQLKPRFVPMGNAFIV
MADGAPKAFRSDVTLIGAGGERKAGTLEVNKPVDFHGWKLYQVGYDEKAGRWSTLSLVEAVRDPWLPAVYLGFFMIMAGN
VLYFWKGFKKMEEA

Sequences:

>Translated_414_residues
MSGSSKTVKTGSAPAGFRDAALFTFVAILAGFGIELLTSGGGINVPGWPFNLVFLLLFGAVIFTVGLMFREHPVVSWLGG
IPLGLSLIVGLALLSLVGGVLPQDKYPPDSIVALLRLNGMFSSWPFAFVTLLFLFNLGLSLVWKTIPFRVANLQFMLFHG
GFWLALSCGLLGTAQLERLVVPLYEGKESDVAYNRESETAIHLPFSIYLKDFQIDEYTPQFALYDPQKDQVIEPKSKLMP
ELRKGVKAEWAGIGSVTVLDYLPDALPDANGTPVPVEGKKGVPFAKVRIDENGKISEQWISSGGPQLKPRFVPMGNAFIV
MADGAPKAFRSDVTLIGAGGERKAGTLEVNKPVDFHGWKLYQVGYDEKAGRWSTLSLVEAVRDPWLPAVYLGFFMIMAGN
VLYFWKGFKKMEEA
>Mature_413_residues
SGSSKTVKTGSAPAGFRDAALFTFVAILAGFGIELLTSGGGINVPGWPFNLVFLLLFGAVIFTVGLMFREHPVVSWLGGI
PLGLSLIVGLALLSLVGGVLPQDKYPPDSIVALLRLNGMFSSWPFAFVTLLFLFNLGLSLVWKTIPFRVANLQFMLFHGG
FWLALSCGLLGTAQLERLVVPLYEGKESDVAYNRESETAIHLPFSIYLKDFQIDEYTPQFALYDPQKDQVIEPKSKLMPE
LRKGVKAEWAGIGSVTVLDYLPDALPDANGTPVPVEGKKGVPFAKVRIDENGKISEQWISSGGPQLKPRFVPMGNAFIVM
ADGAPKAFRSDVTLIGAGGERKAGTLEVNKPVDFHGWKLYQVGYDEKAGRWSTLSLVEAVRDPWLPAVYLGFFMIMAGNV
LYFWKGFKKMEEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45306; Mature: 45175

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSSKTVKTGSAPAGFRDAALFTFVAILAGFGIELLTSGGGINVPGWPFNLVFLLLFGA
CCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHH
VIFTVGLMFREHPVVSWLGGIPLGLSLIVGLALLSLVGGVLPQDKYPPDSIVALLRLNGM
HHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
FSSWPFAFVTLLFLFNLGLSLVWKTIPFRVANLQFMLFHGGFWLALSCGLLGTAQLERLV
CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECEEEEEEECCHHHHHHHCCCCHHHHHHHE
VPLYEGKESDVAYNRESETAIHLPFSIYLKDFQIDEYTPQFALYDPQKDQVIEPKSKLMP
EHHCCCCCCCEEECCCCCCEEEEEHEEEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHH
ELRKGVKAEWAGIGSVTVLDYLPDALPDANGTPVPVEGKKGVPFAKVRIDENGKISEQWI
HHHHCCCCHHCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH
SSGGPQLKPRFVPMGNAFIVMADGAPKAFRSDVTLIGAGGERKAGTLEVNKPVDFHGWKL
HCCCCCCCEEEEECCCEEEEEECCCCHHHHCCEEEEECCCCCCCCEEEECCCCCCCCEEE
YQVGYDEKAGRWSTLSLVEAVRDPWLPAVYLGFFMIMAGNVLYFWKGFKKMEEA
EEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHCC
>Mature Secondary Structure 
SGSSKTVKTGSAPAGFRDAALFTFVAILAGFGIELLTSGGGINVPGWPFNLVFLLLFGA
CCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHH
VIFTVGLMFREHPVVSWLGGIPLGLSLIVGLALLSLVGGVLPQDKYPPDSIVALLRLNGM
HHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
FSSWPFAFVTLLFLFNLGLSLVWKTIPFRVANLQFMLFHGGFWLALSCGLLGTAQLERLV
CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECEEEEEEECCHHHHHHHCCCCHHHHHHHE
VPLYEGKESDVAYNRESETAIHLPFSIYLKDFQIDEYTPQFALYDPQKDQVIEPKSKLMP
EHHCCCCCCCEEECCCCCCEEEEEHEEEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHH
ELRKGVKAEWAGIGSVTVLDYLPDALPDANGTPVPVEGKKGVPFAKVRIDENGKISEQWI
HHHHCCCCHHCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH
SSGGPQLKPRFVPMGNAFIVMADGAPKAFRSDVTLIGAGGERKAGTLEVNKPVDFHGWKL
HCCCCCCCEEEEECCCEEEEEECCCCHHHHCCEEEEECCCCCCCCEEEECCCCCCCCEEE
YQVGYDEKAGRWSTLSLVEAVRDPWLPAVYLGFFMIMAGNVLYFWKGFKKMEEA
EEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA