| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674378
Identifier: 21674378
GI number: 21674378
Start: 1471881
End: 1473125
Strand: Reverse
Name: 21674378
Synonym: CT1560
Alternate gene names: NA
Gene position: 1473125-1471881 (Counterclockwise)
Preceding gene: 21674379
Following gene: 21674377
Centisome position: 68.36
GC content: 57.35
Gene sequence:
>1245_bases ATGTCAGGAAGCAGCAAAACAGTAAAAACCGGTTCAGCGCCAGCCGGTTTCAGGGACGCGGCGCTTTTCACTTTTGTTGC GATTCTGGCCGGATTCGGCATTGAGCTGCTCACCTCGGGCGGCGGGATTAATGTTCCGGGCTGGCCGTTCAACCTTGTTT TTCTGCTTCTTTTCGGAGCAGTGATTTTTACGGTTGGACTTATGTTCAGGGAGCATCCGGTGGTTTCGTGGCTTGGCGGC ATTCCGCTCGGGCTGAGCCTGATCGTCGGCCTCGCGCTGCTTTCGCTGGTTGGCGGCGTCTTGCCGCAGGACAAGTATCC GCCCGATTCGATCGTGGCGCTTCTGCGGCTGAACGGAATGTTTTCGAGCTGGCCTTTCGCCTTTGTCACCCTTTTGTTTC TGTTCAATCTCGGCCTTTCTCTGGTCTGGAAGACCATTCCGTTCAGAGTGGCCAACCTCCAGTTCATGCTCTTTCACGGA GGATTCTGGCTTGCGCTCTCCTGCGGCCTGCTTGGCACGGCGCAGCTGGAACGCCTGGTGGTGCCGCTGTATGAGGGCAA GGAGAGCGATGTGGCTTACAATCGTGAATCCGAGACGGCGATTCATCTTCCCTTTTCCATCTACCTGAAAGATTTTCAGA TCGACGAGTATACACCTCAGTTCGCCTTGTACGATCCGCAGAAAGACCAGGTTATCGAGCCGAAATCGAAACTCATGCCC GAGCTTCGCAAGGGGGTGAAGGCCGAGTGGGCGGGGATCGGTTCGGTGACGGTGCTCGACTATCTGCCCGACGCGCTGCC CGATGCAAACGGCACGCCGGTACCGGTGGAGGGCAAGAAAGGGGTGCCTTTCGCCAAGGTGAGAATCGATGAAAACGGCA AGATTTCGGAGCAATGGATCAGCTCGGGCGGGCCACAGCTCAAGCCGCGCTTCGTTCCAATGGGCAACGCTTTCATCGTG ATGGCCGACGGCGCACCCAAGGCGTTCCGCTCGGATGTGACGCTGATTGGCGCGGGGGGCGAGCGCAAGGCGGGGACGCT CGAAGTGAACAAGCCGGTCGATTTTCACGGCTGGAAACTCTATCAGGTCGGTTACGACGAAAAGGCCGGGCGCTGGTCAA CCCTGAGCCTGGTCGAGGCGGTCAGGGACCCTTGGCTGCCGGCGGTCTATCTTGGATTCTTCATGATTATGGCTGGCAAC GTTTTGTATTTCTGGAAAGGCTTTAAAAAGATGGAGGAGGCATGA
Upstream 100 bases:
>100_bases AGTTGTACTCCATTGTTTGCAACTGTTGTCAGATATTGAAGAACGATGATAAGGAGATTGGTGGTAGCAGTTATGGTGAT AAAACAGCAGGTTAAGTTGT
Downstream 100 bases:
>100_bases CCCTGGTAGAATTTCCGGCAATAACCTTCGCGGCGGTTGTGTGCTGGGCGGTAGGGAGCCTCTTGCAGATTCCGGCGAAA AACTCCAAAGTGTCAGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MSGSSKTVKTGSAPAGFRDAALFTFVAILAGFGIELLTSGGGINVPGWPFNLVFLLLFGAVIFTVGLMFREHPVVSWLGG IPLGLSLIVGLALLSLVGGVLPQDKYPPDSIVALLRLNGMFSSWPFAFVTLLFLFNLGLSLVWKTIPFRVANLQFMLFHG GFWLALSCGLLGTAQLERLVVPLYEGKESDVAYNRESETAIHLPFSIYLKDFQIDEYTPQFALYDPQKDQVIEPKSKLMP ELRKGVKAEWAGIGSVTVLDYLPDALPDANGTPVPVEGKKGVPFAKVRIDENGKISEQWISSGGPQLKPRFVPMGNAFIV MADGAPKAFRSDVTLIGAGGERKAGTLEVNKPVDFHGWKLYQVGYDEKAGRWSTLSLVEAVRDPWLPAVYLGFFMIMAGN VLYFWKGFKKMEEA
Sequences:
>Translated_414_residues MSGSSKTVKTGSAPAGFRDAALFTFVAILAGFGIELLTSGGGINVPGWPFNLVFLLLFGAVIFTVGLMFREHPVVSWLGG IPLGLSLIVGLALLSLVGGVLPQDKYPPDSIVALLRLNGMFSSWPFAFVTLLFLFNLGLSLVWKTIPFRVANLQFMLFHG GFWLALSCGLLGTAQLERLVVPLYEGKESDVAYNRESETAIHLPFSIYLKDFQIDEYTPQFALYDPQKDQVIEPKSKLMP ELRKGVKAEWAGIGSVTVLDYLPDALPDANGTPVPVEGKKGVPFAKVRIDENGKISEQWISSGGPQLKPRFVPMGNAFIV MADGAPKAFRSDVTLIGAGGERKAGTLEVNKPVDFHGWKLYQVGYDEKAGRWSTLSLVEAVRDPWLPAVYLGFFMIMAGN VLYFWKGFKKMEEA >Mature_413_residues SGSSKTVKTGSAPAGFRDAALFTFVAILAGFGIELLTSGGGINVPGWPFNLVFLLLFGAVIFTVGLMFREHPVVSWLGGI PLGLSLIVGLALLSLVGGVLPQDKYPPDSIVALLRLNGMFSSWPFAFVTLLFLFNLGLSLVWKTIPFRVANLQFMLFHGG FWLALSCGLLGTAQLERLVVPLYEGKESDVAYNRESETAIHLPFSIYLKDFQIDEYTPQFALYDPQKDQVIEPKSKLMPE LRKGVKAEWAGIGSVTVLDYLPDALPDANGTPVPVEGKKGVPFAKVRIDENGKISEQWISSGGPQLKPRFVPMGNAFIVM ADGAPKAFRSDVTLIGAGGERKAGTLEVNKPVDFHGWKLYQVGYDEKAGRWSTLSLVEAVRDPWLPAVYLGFFMIMAGNV LYFWKGFKKMEEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45306; Mature: 45175
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSSKTVKTGSAPAGFRDAALFTFVAILAGFGIELLTSGGGINVPGWPFNLVFLLLFGA CCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHH VIFTVGLMFREHPVVSWLGGIPLGLSLIVGLALLSLVGGVLPQDKYPPDSIVALLRLNGM HHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC FSSWPFAFVTLLFLFNLGLSLVWKTIPFRVANLQFMLFHGGFWLALSCGLLGTAQLERLV CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECEEEEEEECCHHHHHHHCCCCHHHHHHHE VPLYEGKESDVAYNRESETAIHLPFSIYLKDFQIDEYTPQFALYDPQKDQVIEPKSKLMP EHHCCCCCCCEEECCCCCCEEEEEHEEEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHH ELRKGVKAEWAGIGSVTVLDYLPDALPDANGTPVPVEGKKGVPFAKVRIDENGKISEQWI HHHHCCCCHHCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH SSGGPQLKPRFVPMGNAFIVMADGAPKAFRSDVTLIGAGGERKAGTLEVNKPVDFHGWKL HCCCCCCCEEEEECCCEEEEEECCCCHHHHCCEEEEECCCCCCCCEEEECCCCCCCCEEE YQVGYDEKAGRWSTLSLVEAVRDPWLPAVYLGFFMIMAGNVLYFWKGFKKMEEA EEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHCC >Mature Secondary Structure SGSSKTVKTGSAPAGFRDAALFTFVAILAGFGIELLTSGGGINVPGWPFNLVFLLLFGA CCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHH VIFTVGLMFREHPVVSWLGGIPLGLSLIVGLALLSLVGGVLPQDKYPPDSIVALLRLNGM HHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC FSSWPFAFVTLLFLFNLGLSLVWKTIPFRVANLQFMLFHGGFWLALSCGLLGTAQLERLV CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECEEEEEEECCHHHHHHHCCCCHHHHHHHE VPLYEGKESDVAYNRESETAIHLPFSIYLKDFQIDEYTPQFALYDPQKDQVIEPKSKLMP EHHCCCCCCCEEECCCCCCEEEEEHEEEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHH ELRKGVKAEWAGIGSVTVLDYLPDALPDANGTPVPVEGKKGVPFAKVRIDENGKISEQWI HHHHCCCCHHCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH SSGGPQLKPRFVPMGNAFIVMADGAPKAFRSDVTLIGAGGERKAGTLEVNKPVDFHGWKL HCCCCCCCEEEEECCCEEEEEECCCCHHHHCCEEEEECCCCCCCCEEEECCCCCCCCEEE YQVGYDEKAGRWSTLSLVEAVRDPWLPAVYLGFFMIMAGNVLYFWKGFKKMEEA EEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA