| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674376
Identifier: 21674376
GI number: 21674376
Start: 1469279
End: 1470970
Strand: Direct
Name: 21674376
Synonym: CT1558
Alternate gene names: NA
Gene position: 1469279-1470970 (Clockwise)
Preceding gene: 21674375
Following gene: 21674381
Centisome position: 68.18
GC content: 60.4
Gene sequence:
>1692_bases GTGAACACTTTCCTTATCGACTACCAGCGCATCCGGACACCAAAAAAGGGCTTTTCGAAGCTTTTCTGCGATTACAGCTC CGAAAGCGAGGCACGAACGAAACTGCTTGCAGACTGCTTCCATCTCGACTACCGCAAGGACGGCGACTACTACCGCCACC TCGGTTTTTTGGCGTCGCGCAACTTCCGCCGGGAAGCGCTCGTGGAGCTGCTGACGGAGCAGAACGAACGGTTCGACGGC TCGGAGCGCCAGCAGCGAGAAATCGAAAAGCTGCGCTCGCCGCGCTGCATGGCCATCGTCACCGGCCAGCAGACCGGACT CTTCACCGGCCCGCTCTACACGATTTACAAGGCGCTGACCGCCGTGGTGCTCGCCCGCAAGCAGAAGGAGCTGTTCCCGG AGTATGACTTCGTGCCGGTGTTCTGGATCGAAAGCGAAGATCACGATTTCGACGAAGCGTCATCGACCGTACTCTTCTCC GGCGGAGGCCTCGAACAGATCACAGCGGAAGCCGCGCATCGCCTCCCCGACCAGATGGCTGGAGCCACACAGCTCGGCGC GAGCATCGGCGCAACGGTGCAGGAGTTCCTTGACCTCTTGCCCGACACGGAGTTCAAGCCGGAGATCGCGGAAATACTCG AATCCTGCTACGAACCGGGCGTCACCTTCGAGATCGCCTTTGCCCGCACGATGAACCGGCTCTTCAGGGAACACCCGCTG ATCCTGCTTTCGGCGCAGGACACGCGCTTCAAGCAACTGGCGGTCGAGGTACTCTGCCGAGAGGTCGAAACCGCGCCCGC CTCGTCGTACGACGTGGTGGCGCAAAGCTCGATCCTCGAATCGATGGGTTACCCGGCGCAGACCAAGCCGCGCGCAGTCA ACCTCTTCTACCTCAACCAGCTCGGCCAGCGCCTGAAGATCGAGCAGCCCTCGCCCGACAACTTTCTCATCGTGCCTGAC CGGCAGCGTTACACGCGCCACCAGTTGCTTGAAATCTGCCAGGATCATCCCGAAAAATTCAGCCCGAACGTCATCCTCCG CCCGATCGTGCAGGACGCCGTGCTGCCAACCTTCGCCTACATCGGTGGCCCCGGCGAAATCAGCTATCTGGCGCAGTTCC GCAAGGCGTACGAGCACTTCGGCCTCTCGATGCCCTTCGTGATTCCGCGCGGCAGCTTCACGCTCGTCGAGCCGAAGATC GCCCGCACGATGGACAAGGTGCTCAAGGCGACTGGAAGGCCGAGCTTTTCGCGAAGGCAGGTGTACGAAGCGGTATTCGA AGATGTGCAGGAGCTGCGAAAATCGATGGTTTCAGGCGGCGACAGTCAGAAGCTCGACGCCCTGTTCGAGCAGGTGGAAT CGGAGGTCACCCGGTCGCTCTCGACGCTGGAACCGGCGCTCGTCAAGATGGATCCGACCTTGCAGGCAGCGCTGTCCGCC TCGTCAGGCCAGATCACGAAAATCATCGGCACCATAAAGGAGAAAACGTACCGCGCAGGTCGGCGGAAGCACGACGAGCT TTTACAGCAGCTCGACAAGGCAGAGCTGAACCTGTTCCCGGATGGCAAACCACAGGAACGAAGCATCAACATCTTCCACT ACCTCAACAAGTACGGCCCGTCGCTGATTGGCGAACTGGCCAAGGTGCTCCAGGGCTACTCGACCGAAGCGCATCTGATC GTGGAGTTGTAG
Upstream 100 bases:
>100_bases TATGTGGCTGTCACACCCATCACCTGTGACATGACCGATCATCGCTTCAGAAGCGAACTCGAAACCTGGGGCCTCCAGAA CACCATCAAGAAGTAAGCGT
Downstream 100 bases:
>100_bases AAAAAGGGAACTTTCAAGTACGAAAACGACAAAAGGGACAAAGAAGATCAGAAAATCCTCATTGCCCCTTCAGTCCCTAA TGTCCTTTAAGTCCTTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MNTFLIDYQRIRTPKKGFSKLFCDYSSESEARTKLLADCFHLDYRKDGDYYRHLGFLASRNFRREALVELLTEQNERFDG SERQQREIEKLRSPRCMAIVTGQQTGLFTGPLYTIYKALTAVVLARKQKELFPEYDFVPVFWIESEDHDFDEASSTVLFS GGGLEQITAEAAHRLPDQMAGATQLGASIGATVQEFLDLLPDTEFKPEIAEILESCYEPGVTFEIAFARTMNRLFREHPL ILLSAQDTRFKQLAVEVLCREVETAPASSYDVVAQSSILESMGYPAQTKPRAVNLFYLNQLGQRLKIEQPSPDNFLIVPD RQRYTRHQLLEICQDHPEKFSPNVILRPIVQDAVLPTFAYIGGPGEISYLAQFRKAYEHFGLSMPFVIPRGSFTLVEPKI ARTMDKVLKATGRPSFSRRQVYEAVFEDVQELRKSMVSGGDSQKLDALFEQVESEVTRSLSTLEPALVKMDPTLQAALSA SSGQITKIIGTIKEKTYRAGRRKHDELLQQLDKAELNLFPDGKPQERSINIFHYLNKYGPSLIGELAKVLQGYSTEAHLI VEL
Sequences:
>Translated_563_residues MNTFLIDYQRIRTPKKGFSKLFCDYSSESEARTKLLADCFHLDYRKDGDYYRHLGFLASRNFRREALVELLTEQNERFDG SERQQREIEKLRSPRCMAIVTGQQTGLFTGPLYTIYKALTAVVLARKQKELFPEYDFVPVFWIESEDHDFDEASSTVLFS GGGLEQITAEAAHRLPDQMAGATQLGASIGATVQEFLDLLPDTEFKPEIAEILESCYEPGVTFEIAFARTMNRLFREHPL ILLSAQDTRFKQLAVEVLCREVETAPASSYDVVAQSSILESMGYPAQTKPRAVNLFYLNQLGQRLKIEQPSPDNFLIVPD RQRYTRHQLLEICQDHPEKFSPNVILRPIVQDAVLPTFAYIGGPGEISYLAQFRKAYEHFGLSMPFVIPRGSFTLVEPKI ARTMDKVLKATGRPSFSRRQVYEAVFEDVQELRKSMVSGGDSQKLDALFEQVESEVTRSLSTLEPALVKMDPTLQAALSA SSGQITKIIGTIKEKTYRAGRRKHDELLQQLDKAELNLFPDGKPQERSINIFHYLNKYGPSLIGELAKVLQGYSTEAHLI VEL >Mature_563_residues MNTFLIDYQRIRTPKKGFSKLFCDYSSESEARTKLLADCFHLDYRKDGDYYRHLGFLASRNFRREALVELLTEQNERFDG SERQQREIEKLRSPRCMAIVTGQQTGLFTGPLYTIYKALTAVVLARKQKELFPEYDFVPVFWIESEDHDFDEASSTVLFS GGGLEQITAEAAHRLPDQMAGATQLGASIGATVQEFLDLLPDTEFKPEIAEILESCYEPGVTFEIAFARTMNRLFREHPL ILLSAQDTRFKQLAVEVLCREVETAPASSYDVVAQSSILESMGYPAQTKPRAVNLFYLNQLGQRLKIEQPSPDNFLIVPD RQRYTRHQLLEICQDHPEKFSPNVILRPIVQDAVLPTFAYIGGPGEISYLAQFRKAYEHFGLSMPFVIPRGSFTLVEPKI ARTMDKVLKATGRPSFSRRQVYEAVFEDVQELRKSMVSGGDSQKLDALFEQVESEVTRSLSTLEPALVKMDPTLQAALSA SSGQITKIIGTIKEKTYRAGRRKHDELLQQLDKAELNLFPDGKPQERSINIFHYLNKYGPSLIGELAKVLQGYSTEAHLI VEL
Specific function: Unknown
COG id: COG4365
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0747 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1558_CHLTE (Q8KC68)
Other databases:
- EMBL: AE006470 - RefSeq: NP_662441.1 - GeneID: 1007607 - GenomeReviews: AE006470_GR - KEGG: cte:CT1558 - NMPDR: fig|194439.1.peg.1535 - TIGR: CT1558 - HOGENOM: HBG405051 - OMA: TRPLMQE - ProtClustDB: CLSK637822 - BioCyc: CTEP194439:CT_1558-MONOMER - HAMAP: MF_01867 - InterPro: IPR011199 - PIRSF: PIRSF012535
Pfam domain/function: PF10079 DUF2317
EC number: NA
Molecular weight: Translated: 63913; Mature: 63913
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFLIDYQRIRTPKKGFSKLFCDYSSESEARTKLLADCFHLDYRKDGDYYRHLGFLASR CCCEEEEHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC NFRREALVELLTEQNERFDGSERQQREIEKLRSPRCMAIVTGQQTGLFTGPLYTIYKALT CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHH AVVLARKQKELFPEYDFVPVFWIESEDHDFDEASSTVLFSGGGLEQITAEAAHRLPDQMA HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCHHHHC GATQLGASIGATVQEFLDLLPDTEFKPEIAEILESCYEPGVTFEIAFARTMNRLFREHPL CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCE ILLSAQDTRFKQLAVEVLCREVETAPASSYDVVAQSSILESMGYPAQTKPRAVNLFYLNQ EEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHH LGQRLKIEQPSPDNFLIVPDRQRYTRHQLLEICQDHPEKFSPNVILRPIVQDAVLPTFAY HHHHEECCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHH IGGPGEISYLAQFRKAYEHFGLSMPFVIPRGSFTLVEPKIARTMDKVLKATGRPSFSRRQ CCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECHHHHHHHHHHHHHCCCCCHHHHH VYEAVFEDVQELRKSMVSGGDSQKLDALFEQVESEVTRSLSTLEPALVKMDPTLQAALSA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHCC SSGQITKIIGTIKEKTYRAGRRKHDELLQQLDKAELNLFPDGKPQERSINIFHYLNKYGP CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCH SLIGELAKVLQGYSTEAHLIVEL HHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MNTFLIDYQRIRTPKKGFSKLFCDYSSESEARTKLLADCFHLDYRKDGDYYRHLGFLASR CCCEEEEHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC NFRREALVELLTEQNERFDGSERQQREIEKLRSPRCMAIVTGQQTGLFTGPLYTIYKALT CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHH AVVLARKQKELFPEYDFVPVFWIESEDHDFDEASSTVLFSGGGLEQITAEAAHRLPDQMA HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCHHHHC GATQLGASIGATVQEFLDLLPDTEFKPEIAEILESCYEPGVTFEIAFARTMNRLFREHPL CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCE ILLSAQDTRFKQLAVEVLCREVETAPASSYDVVAQSSILESMGYPAQTKPRAVNLFYLNQ EEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHH LGQRLKIEQPSPDNFLIVPDRQRYTRHQLLEICQDHPEKFSPNVILRPIVQDAVLPTFAY HHHHEECCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHH IGGPGEISYLAQFRKAYEHFGLSMPFVIPRGSFTLVEPKIARTMDKVLKATGRPSFSRRQ CCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECHHHHHHHHHHHHHCCCCCHHHHH VYEAVFEDVQELRKSMVSGGDSQKLDALFEQVESEVTRSLSTLEPALVKMDPTLQAALSA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHCC SSGQITKIIGTIKEKTYRAGRRKHDELLQQLDKAELNLFPDGKPQERSINIFHYLNKYGP CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCH SLIGELAKVLQGYSTEAHLIVEL HHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12093901