| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674050
Identifier: 21674050
GI number: 21674050
Start: 1149128
End: 1149904
Strand: Direct
Name: 21674050
Synonym: CT1225
Alternate gene names: NA
Gene position: 1149128-1149904 (Clockwise)
Preceding gene: 21674049
Following gene: 21674051
Centisome position: 53.33
GC content: 51.99
Gene sequence:
>777_bases ATGACGAAAGACGAAAAACAAAAGCTTTACACGGTTCGCTGGTATGTACGCGAACGGTGGGCAGATGCAAATTCACAGCG AGACGTTCTTGAACTTCTCACAGAACTTCTTGATCCTGAATCTGCTCCTGATGTCAGGCCATCGGTTTCAGCCGGCGGTC AGCACCTTCTCTGGTGCCCCTTCGCGGAAACAGATTTTGCTCCGGCGGTTTCACGCGGCAGCTATGCGACAGGTTATCCG AAAGGCGCGGTCGTCCACTTCACTGCCGGGCGGCGGAATGGCCTCAAACCGGCGATGAAATACCAGACCGAGCAGGGGTA TCTCTATTTCGTTATCGACAAGGATGGCAATATCGGCCAGAATTTCCCGCTCGACTCATGGGGATACCACGCCGGAAAAA GCAGTTATCCGGGCCTGAATGGCACGGTAAGCGATGAGCTGGTTGGAATAGAAATCGAGTGCGCCGGTCTGTTGACCAAA GAGGGATCAACCTATAAAACCTGGTATCAAACGGCAGTCGCCGAGGAAGAGGTTCGATACATCAAGACCAAAACCGACAA CCAGCAAGCGGGTTATTACGAAAAATACACACAAGAGCAAGAAGAAGCCTTGACGCGTCTGTTGCTCTGGCTCCATAAAA ACAACCCGGATGTATTCAGTCTGGACTTTGTGGTTGGTCACGATGAGGTCAGCCCAGGAAGAAAAAATGACCCCGGCGGC TCTCTTTCCATGTCGATGCCAAAGTATCGGGAATTCCTGAAACAGCAAGCGGGGTAG
Upstream 100 bases:
>100_bases TGACACTGATCTCTTACGGCTGGACAAACCGGATGGTAAAATGTAACTTTCAAAATGTTCGATGGAAGTTTCCGGAAACC ATTCCAAGGAGGAAAATCCA
Downstream 100 bases:
>100_bases ATTATTTCCTCAGCAGGTTAAAAGGCTCAAACAGGAGAGGCTGTTTCTGATTGGCTTGGGAGACAGCCTCTCCTGTTTTC TCCCGCAATCGGACAAGACA
Product: N-acetylmuramoyl-L-alanine amidase, putative
Products: NA
Alternate protein names: N-Acetylmuramyl-L-Alanine Amidase
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTKDEKQKLYTVRWYVRERWADANSQRDVLELLTELLDPESAPDVRPSVSAGGQHLLWCPFAETDFAPAVSRGSYATGYP KGAVVHFTAGRRNGLKPAMKYQTEQGYLYFVIDKDGNIGQNFPLDSWGYHAGKSSYPGLNGTVSDELVGIEIECAGLLTK EGSTYKTWYQTAVAEEEVRYIKTKTDNQQAGYYEKYTQEQEEALTRLLLWLHKNNPDVFSLDFVVGHDEVSPGRKNDPGG SLSMSMPKYREFLKQQAG
Sequences:
>Translated_258_residues MTKDEKQKLYTVRWYVRERWADANSQRDVLELLTELLDPESAPDVRPSVSAGGQHLLWCPFAETDFAPAVSRGSYATGYP KGAVVHFTAGRRNGLKPAMKYQTEQGYLYFVIDKDGNIGQNFPLDSWGYHAGKSSYPGLNGTVSDELVGIEIECAGLLTK EGSTYKTWYQTAVAEEEVRYIKTKTDNQQAGYYEKYTQEQEEALTRLLLWLHKNNPDVFSLDFVVGHDEVSPGRKNDPGG SLSMSMPKYREFLKQQAG >Mature_257_residues TKDEKQKLYTVRWYVRERWADANSQRDVLELLTELLDPESAPDVRPSVSAGGQHLLWCPFAETDFAPAVSRGSYATGYPK GAVVHFTAGRRNGLKPAMKYQTEQGYLYFVIDKDGNIGQNFPLDSWGYHAGKSSYPGLNGTVSDELVGIEIECAGLLTKE GSTYKTWYQTAVAEEEVRYIKTKTDNQQAGYYEKYTQEQEEALTRLLLWLHKNNPDVFSLDFVVGHDEVSPGRKNDPGGS LSMSMPKYREFLKQQAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29114; Mature: 28983
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKDEKQKLYTVRWYVRERWADANSQRDVLELLTELLDPESAPDVRPSVSAGGQHLLWCP CCCCCHHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC FAETDFAPAVSRGSYATGYPKGAVVHFTAGRRNGLKPAMKYQTEQGYLYFVIDKDGNIGQ CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHEECCCCEEEEEEECCCCCCC NFPLDSWGYHAGKSSYPGLNGTVSDELVGIEIECAGLLTKEGSTYKTWYQTAVAEEEVRY CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHE IKTKTDNQQAGYYEKYTQEQEEALTRLLLWLHKNNPDVFSLDFVVGHDEVSPGRKNDPGG EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCC SLSMSMPKYREFLKQQAG CEEECCHHHHHHHHHHCC >Mature Secondary Structure TKDEKQKLYTVRWYVRERWADANSQRDVLELLTELLDPESAPDVRPSVSAGGQHLLWCP CCCCHHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC FAETDFAPAVSRGSYATGYPKGAVVHFTAGRRNGLKPAMKYQTEQGYLYFVIDKDGNIGQ CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHEECCCCEEEEEEECCCCCCC NFPLDSWGYHAGKSSYPGLNGTVSDELVGIEIECAGLLTKEGSTYKTWYQTAVAEEEVRY CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHE IKTKTDNQQAGYYEKYTQEQEEALTRLLLWLHKNNPDVFSLDFVVGHDEVSPGRKNDPGG EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCC SLSMSMPKYREFLKQQAG CEEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA