| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674010
Identifier: 21674010
GI number: 21674010
Start: 1113660
End: 1114430
Strand: Direct
Name: 21674010
Synonym: CT1184
Alternate gene names: NA
Gene position: 1113660-1114430 (Clockwise)
Preceding gene: 21674009
Following gene: 21674011
Centisome position: 51.68
GC content: 50.32
Gene sequence:
>771_bases ATGGATTTATCCTCTTTCCTTCCCTTCAGAGACGAAATGGTCAAGGTATATCACTGTCTGACCACCAATGCAACCCATAC CTCCGAGAAACCAGTTTTCAGTGAGCTCAAGGTTCGCCGCTACTCCTGTCCGCTGGAAGATGTCTCCAACTTTATCACCA ACAAAATAGAGAGCTGGGTTGGCTGGGAACTCAAGAACCAGAAAACGGCGGTCGGTGGCATGAAAACCATCCGCGCAGAG GTTTCCTCTTTCGCCCTGCTCGGTATGAAGATCGACGTCACGTTCGGGCTGGTTGAAGAAACCGACATCAATGGCCGGAA AATCACCACCGTCAACGGCAAAGCCCACACCAGGATCGACTCCAAGGGTGATCTCGGCGAAAGCCGCAGAATGCTCCGGA TGATGCTGGCCTCACTCGATTTCGAGTTCAGACCACAGATCGTCCATGAAGATGAATACGTTCACCGCTCCATTGACCCG AAAAACTCGAACGCGGCATTCCAGCAACTTTTCGATGAATCCACGCTCGAACACCGCCCAAGCACACCAAAGGCCAAGTC TATTGAGCTAAAAAAACCGGTTAAAAAACAGATAGAGTTCAAGTCATCCAAGAACAGTGGAGAAACTGTAAAGGCCCCCA TCTCATCTCAGGCCATACCAGTCGCCACGAACGGTGCACAGACGACCACTGCCCCGGATTCGGATGTCGAAGAGGTGAAA AAACCGGCCAAACCGAAAATTACCGTCATCTCCCTGAAAAAAAATTCATAA
Upstream 100 bases:
>100_bases CAGGGTGCAACCATCAACGCAGCATGCGGACAGCTGGCCACCCGGCCTGTGAGGTAATAACGGTTTGAAACCGAGAAGAA ATCTTTAACCGGCCCATCTC
Downstream 100 bases:
>100_bases AAAGACTATCGTTTCATGAGAATAATCCTGTTGGGCGCGCCGGGCGCCGGCAAAGGAACACAGGCACAATATATTTCTGA AGCTTTTGGCATACCCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MDLSSFLPFRDEMVKVYHCLTTNATHTSEKPVFSELKVRRYSCPLEDVSNFITNKIESWVGWELKNQKTAVGGMKTIRAE VSSFALLGMKIDVTFGLVEETDINGRKITTVNGKAHTRIDSKGDLGESRRMLRMMLASLDFEFRPQIVHEDEYVHRSIDP KNSNAAFQQLFDESTLEHRPSTPKAKSIELKKPVKKQIEFKSSKNSGETVKAPISSQAIPVATNGAQTTTAPDSDVEEVK KPAKPKITVISLKKNS
Sequences:
>Translated_256_residues MDLSSFLPFRDEMVKVYHCLTTNATHTSEKPVFSELKVRRYSCPLEDVSNFITNKIESWVGWELKNQKTAVGGMKTIRAE VSSFALLGMKIDVTFGLVEETDINGRKITTVNGKAHTRIDSKGDLGESRRMLRMMLASLDFEFRPQIVHEDEYVHRSIDP KNSNAAFQQLFDESTLEHRPSTPKAKSIELKKPVKKQIEFKSSKNSGETVKAPISSQAIPVATNGAQTTTAPDSDVEEVK KPAKPKITVISLKKNS >Mature_256_residues MDLSSFLPFRDEMVKVYHCLTTNATHTSEKPVFSELKVRRYSCPLEDVSNFITNKIESWVGWELKNQKTAVGGMKTIRAE VSSFALLGMKIDVTFGLVEETDINGRKITTVNGKAHTRIDSKGDLGESRRMLRMMLASLDFEFRPQIVHEDEYVHRSIDP KNSNAAFQQLFDESTLEHRPSTPKAKSIELKKPVKKQIEFKSSKNSGETVKAPISSQAIPVATNGAQTTTAPDSDVEEVK KPAKPKITVISLKKNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28672; Mature: 28672
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSSFLPFRDEMVKVYHCLTTNATHTSEKPVFSELKVRRYSCPLEDVSNFITNKIESWV CCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GWELKNQKTAVGGMKTIRAEVSSFALLGMKIDVTFGLVEETDINGRKITTVNGKAHTRID CCEECCCCCHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEECCCCCCEEEEECCCEEEEEC SKGDLGESRRMLRMMLASLDFEFRPQIVHEDEYVHRSIDPKNSNAAFQQLFDESTLEHRP CCCCCCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCC STPKAKSIELKKPVKKQIEFKSSKNSGETVKAPISSQAIPVATNGAQTTTAPDSDVEEVK CCCCCCCEEHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCHHHHH KPAKPKITVISLKKNS CCCCCCEEEEEEECCC >Mature Secondary Structure MDLSSFLPFRDEMVKVYHCLTTNATHTSEKPVFSELKVRRYSCPLEDVSNFITNKIESWV CCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GWELKNQKTAVGGMKTIRAEVSSFALLGMKIDVTFGLVEETDINGRKITTVNGKAHTRID CCEECCCCCHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEECCCCCCEEEEECCCEEEEEC SKGDLGESRRMLRMMLASLDFEFRPQIVHEDEYVHRSIDPKNSNAAFQQLFDESTLEHRP CCCCCCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCC STPKAKSIELKKPVKKQIEFKSSKNSGETVKAPISSQAIPVATNGAQTTTAPDSDVEEVK CCCCCCCEEHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCHHHHH KPAKPKITVISLKKNS CCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA