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The map label for this gene is arnB [H]

Identifier: 21673977

GI number: 21673977

Start: 1080604

End: 1081761

Strand: Reverse

Name: arnB [H]

Synonym: CT1151

Alternate gene names: 21673977

Gene position: 1081761-1080604 (Counterclockwise)

Preceding gene: 21673978

Following gene: 21673976

Centisome position: 50.2

GC content: 61.57

Gene sequence:

>1158_bases
ATGGCAGGAGCCGAGCTGATTGGGAAAGAGGAACTGGCCCAGATACAGGAGTTATTCAGCGGGGAGAAAACCACGCTGTA
CCGGTATGCGCCGGGTAACTACAAGGCGAGAGAGTTCGAGGAGAAGTTCGCCGCATATATGGGCGTGAAGTACGCTCACG
CCGTTTCGTCGGGCACGGCGGCGATTCACTGCGCGCTGGCGGCTGCGGGCGTCGGCCCGGGCGACGAGGTGATCACCACC
GCATGGACCTTCATCGCTCCGGTCGAAGCCGCCGCCGCGCTTGGCGCGGTGCCGGTGCCGGTGGAGATCGACGAGACCTA
CCACCTTGATCCGGCGGAGGTCGAAAAGGCGATCACGCCGAAGACCAAGGCCGTCGTGGCGATTCCGATGTGGGCCGCAC
CGAAAATGGACGAAATCGCCGAAATCTGCGAGCGCCGCGGCGTGACGCTCATTGAAGACGCCGCCCAGTCGCTCGGCGCG
ACCTACAAAGGCCGCAAGCTCGGCACCATCGGCAAGGTTGGCTCCTTCTCCTTCGATGCGGGCAAAACGCTGCACGTCGG
TGAGGGCGGCATGGTCATCACCGACGACAAGGATATCTACGACCGCGTGGCCGAATTTTCCGACCACGGCCACATGCACC
TGCCTGGCCTGCTGCGCGGCAAGGATCCGCGCCGCGCCAAGGGTCTGAACTACCGACTCAGCGAAGTGACTGCCGCCATC
GGCGTCGCCCAGCTCGCCAAAATCGACTACATCCTCTCCAAAGCGCGGGAGAACAAGTACAAGATTAAAGATCGCATCAG
CCACCTCAGCAACCTCACGATGCGCCCCTTCACCGACGAAGCTGGAGCGCAGGGCGATACGCTGATCTTCAAGGTTCGCG
ATCCCAAGGCTGCGTTGGAGTTCGAGGCGCACCTGATGGAGCACGGTTTCGGCACCAAGATTTTGCCCGAAGCGATCGAC
TGGCACTACGCTGCTGTCTGGGGTCATCTCCTGAAGGCCTACGACCGGTACCGCGATGCCAACCTTGAAGAGTTGTGGCC
GAAAACCGGCCAGCTTCTCCAGAGCAGCATCTGCCTGAATATCCCCGTGCTGATGGACGACGCCACCATCGACAAACTCG
TTGCCGCCATTATTTCCGGTGCCGAGAAGATCGGGTAA

Upstream 100 bases:

>100_bases
CGGCCCGGGTGGTAATCGACGCGCTGACTTGAAAGAAAGTGGTGAAGTTGACGTAATGAATAACGTGGACACAAACAATA
ATTAAAAAAAATCAAACACT

Downstream 100 bases:

>100_bases
AAGAGGGAAGTTCTGTAAACGAAAAAAGCCTGCGTCAAAGCAGGCTTTTCTATTGGAGGTGAAGAGCGGATTCGAACCGC
TGTACGAGGTTTTGCAGACC

Product: DegT/DnrJ/EryC1/StrS family protein

Products: NA

Alternate protein names: UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase; UDP-4-amino-4-deoxy-L-arabinose aminotransferase [H]

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MAGAELIGKEELAQIQELFSGEKTTLYRYAPGNYKAREFEEKFAAYMGVKYAHAVSSGTAAIHCALAAAGVGPGDEVITT
AWTFIAPVEAAAALGAVPVPVEIDETYHLDPAEVEKAITPKTKAVVAIPMWAAPKMDEIAEICERRGVTLIEDAAQSLGA
TYKGRKLGTIGKVGSFSFDAGKTLHVGEGGMVITDDKDIYDRVAEFSDHGHMHLPGLLRGKDPRRAKGLNYRLSEVTAAI
GVAQLAKIDYILSKARENKYKIKDRISHLSNLTMRPFTDEAGAQGDTLIFKVRDPKAALEFEAHLMEHGFGTKILPEAID
WHYAAVWGHLLKAYDRYRDANLEELWPKTGQLLQSSICLNIPVLMDDATIDKLVAAIISGAEKIG

Sequences:

>Translated_385_residues
MAGAELIGKEELAQIQELFSGEKTTLYRYAPGNYKAREFEEKFAAYMGVKYAHAVSSGTAAIHCALAAAGVGPGDEVITT
AWTFIAPVEAAAALGAVPVPVEIDETYHLDPAEVEKAITPKTKAVVAIPMWAAPKMDEIAEICERRGVTLIEDAAQSLGA
TYKGRKLGTIGKVGSFSFDAGKTLHVGEGGMVITDDKDIYDRVAEFSDHGHMHLPGLLRGKDPRRAKGLNYRLSEVTAAI
GVAQLAKIDYILSKARENKYKIKDRISHLSNLTMRPFTDEAGAQGDTLIFKVRDPKAALEFEAHLMEHGFGTKILPEAID
WHYAAVWGHLLKAYDRYRDANLEELWPKTGQLLQSSICLNIPVLMDDATIDKLVAAIISGAEKIG
>Mature_384_residues
AGAELIGKEELAQIQELFSGEKTTLYRYAPGNYKAREFEEKFAAYMGVKYAHAVSSGTAAIHCALAAAGVGPGDEVITTA
WTFIAPVEAAAALGAVPVPVEIDETYHLDPAEVEKAITPKTKAVVAIPMWAAPKMDEIAEICERRGVTLIEDAAQSLGAT
YKGRKLGTIGKVGSFSFDAGKTLHVGEGGMVITDDKDIYDRVAEFSDHGHMHLPGLLRGKDPRRAKGLNYRLSEVTAAIG
VAQLAKIDYILSKARENKYKIKDRISHLSNLTMRPFTDEAGAQGDTLIFKVRDPKAALEFEAHLMEHGFGTKILPEAIDW
HYAAVWGHLLKAYDRYRDANLEELWPKTGQLLQSSICLNIPVLMDDATIDKLVAAIISGAEKIG

Specific function: Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. ArnB subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=260, Percent_Identity=36.9230769230769, Blast_Score=148, Evalue=6e-37,
Organism=Escherichia coli, GI2367285, Length=201, Percent_Identity=35.3233830845771, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022850
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: =2.6.1.87 [H]

Molecular weight: Translated: 41879; Mature: 41748

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGAELIGKEELAQIQELFSGEKTTLYRYAPGNYKAREFEEKFAAYMGVKYAHAVSSGTA
CCCHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
AIHCALAAAGVGPGDEVITTAWTFIAPVEAAAALGAVPVPVEIDETYHLDPAEVEKAITP
HEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCC
KTKAVVAIPMWAAPKMDEIAEICERRGVTLIEDAAQSLGATYKGRKLGTIGKVGSFSFDA
CCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
GKTLHVGEGGMVITDDKDIYDRVAEFSDHGHMHLPGLLRGKDPRRAKGLNYRLSEVTAAI
CCEEEECCCCEEEECCHHHHHHHHHHCCCCCEECCHHHCCCCCCHHCCCCCHHHHHHHHH
GVAQLAKIDYILSKARENKYKIKDRISHLSNLTMRPFTDEAGAQGDTLIFKVRDPKAALE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHH
FEAHLMEHGFGTKILPEAIDWHYAAVWGHLLKAYDRYRDANLEELWPKTGQLLQSSICLN
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHEE
IPVLMDDATIDKLVAAIISGAEKIG
CCEEECCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGAELIGKEELAQIQELFSGEKTTLYRYAPGNYKAREFEEKFAAYMGVKYAHAVSSGTA
CCHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
AIHCALAAAGVGPGDEVITTAWTFIAPVEAAAALGAVPVPVEIDETYHLDPAEVEKAITP
HEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHCCC
KTKAVVAIPMWAAPKMDEIAEICERRGVTLIEDAAQSLGATYKGRKLGTIGKVGSFSFDA
CCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
GKTLHVGEGGMVITDDKDIYDRVAEFSDHGHMHLPGLLRGKDPRRAKGLNYRLSEVTAAI
CCEEEECCCCEEEECCHHHHHHHHHHCCCCCEECCHHHCCCCCCHHCCCCCHHHHHHHHH
GVAQLAKIDYILSKARENKYKIKDRISHLSNLTMRPFTDEAGAQGDTLIFKVRDPKAALE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHH
FEAHLMEHGFGTKILPEAIDWHYAAVWGHLLKAYDRYRDANLEELWPKTGQLLQSSICLN
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHEE
IPVLMDDATIDKLVAAIISGAEKIG
CCEEECCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA