| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673976
Identifier: 21673976
GI number: 21673976
Start: 1079500
End: 1080327
Strand: Reverse
Name: 21673976
Synonym: CT1150
Alternate gene names: NA
Gene position: 1080327-1079500 (Counterclockwise)
Preceding gene: 21673977
Following gene: 21673975
Centisome position: 50.13
GC content: 58.82
Gene sequence:
>828_bases ATGATCGATTTTAACGTTGACAGCGCGCGTTGTACACGGTGCGGGCAATGTGTGGCGGACTGCCCATCCCGGATTATCGT GATGGCAACGGGCGAATATCCCTCCATCGCGCCGGGCAAGGAGTTTTCCTGTTTGCGCTGTGAGCACTGCCTGGCTGTCT GTCCGGAGGCGGCCATTTCCATCCTCGGGTTCAGTCCGGACGGAAGTACACCGCTGAAGGGGAATCTTCCCGAAACAGAC CAGCTCGAAACTCTGATCGCCGGTCGTCGCTCGGTGCGGCGCTACTGTCCGGAGAATCTTTCGCCGGAGTTGATCGACAA GCTGATTACGGTCGCATCCTGCGCGCCGACCGGCGTTAACGCGAGAAAGGTACGCTTCACCGTGCTCGATGACCGCGAGA AGACAGCCCATTTCCGTGACGAGGTGATGGAGAGGCTCGTGCGGTTGCTCGAAGAGGAGGCCCTGCCGGAATCGAAGGCG TACTACGCCCGCTTCGTAAAGGTATGGCAGAAGCACAAGATCGATCTTGTTTTCCGGGACGCGCCCCATCTGCTAATCGC CACGGCCCCGAAAAGCCTCTCCACACCGAGGCAGGATTGCGTGATCGCACTGACAACTTTCGAATTGTACGCGCAGGCTT GCGGCATCGGTACGCTCTGGAACGGTATCGCGACCTGGGCGATCGAAGAGATGCTACCTGAAATGCGCCAGCGCCTCGGC ATTCCCGACGATCATGCGTTCGGCTATGCTATGCTTTTCGGTAAACCTGCGGTGAGATACGCCCGCACGGTTCAGCACCA TCCGCCGGAGATTTATCGTGTGCCATAG
Upstream 100 bases:
>100_bases GTTTTTTAGCCTCTTTGAATCGCGAGGCTGGCATTACAAGTCTGAAGCCCGTATCATTAAACAATAGTGTCATTTGTAAA AACACTGAACGACGAACGTT
Downstream 100 bases:
>100_bases TCTGGATTGTCCCTAAAGATGATGATTCGGCGATGTGCTTGAGGCATTGTTCTATGTTGTTGTGGAGGTTTTTTGCCGCG TCAGAGAAGTATCTCAATGC
Product: nitroreductase family protein
Products: NA
Alternate protein names: Nitroreductase Family Protein; Ferredoxin; Nitroreductase Family Protein Fused Ferredoxin Domain; Ferridoxin; Reductase; Ferredoxin-Nitroreductase Protein; Ferredoxin-Like Domain-Containing Protein; Nitroreductase Domain Protein
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MIDFNVDSARCTRCGQCVADCPSRIIVMATGEYPSIAPGKEFSCLRCEHCLAVCPEAAISILGFSPDGSTPLKGNLPETD QLETLIAGRRSVRRYCPENLSPELIDKLITVASCAPTGVNARKVRFTVLDDREKTAHFRDEVMERLVRLLEEEALPESKA YYARFVKVWQKHKIDLVFRDAPHLLIATAPKSLSTPRQDCVIALTTFELYAQACGIGTLWNGIATWAIEEMLPEMRQRLG IPDDHAFGYAMLFGKPAVRYARTVQHHPPEIYRVP
Sequences:
>Translated_275_residues MIDFNVDSARCTRCGQCVADCPSRIIVMATGEYPSIAPGKEFSCLRCEHCLAVCPEAAISILGFSPDGSTPLKGNLPETD QLETLIAGRRSVRRYCPENLSPELIDKLITVASCAPTGVNARKVRFTVLDDREKTAHFRDEVMERLVRLLEEEALPESKA YYARFVKVWQKHKIDLVFRDAPHLLIATAPKSLSTPRQDCVIALTTFELYAQACGIGTLWNGIATWAIEEMLPEMRQRLG IPDDHAFGYAMLFGKPAVRYARTVQHHPPEIYRVP >Mature_275_residues MIDFNVDSARCTRCGQCVADCPSRIIVMATGEYPSIAPGKEFSCLRCEHCLAVCPEAAISILGFSPDGSTPLKGNLPETD QLETLIAGRRSVRRYCPENLSPELIDKLITVASCAPTGVNARKVRFTVLDDREKTAHFRDEVMERLVRLLEEEALPESKA YYARFVKVWQKHKIDLVFRDAPHLLIATAPKSLSTPRQDCVIALTTFELYAQACGIGTLWNGIATWAIEEMLPEMRQRLG IPDDHAFGYAMLFGKPAVRYARTVQHHPPEIYRVP
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30793; Mature: 30793
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDFNVDSARCTRCGQCVADCPSRIIVMATGEYPSIAPGKEFSCLRCEHCLAVCPEAAIS CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHE ILGFSPDGSTPLKGNLPETDQLETLIAGRRSVRRYCPENLSPELIDKLITVASCAPTGVN EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC ARKVRFTVLDDREKTAHFRDEVMERLVRLLEEEALPESKAYYARFVKVWQKHKIDLVFRD CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEC APHLLIATAPKSLSTPRQDCVIALTTFELYAQACGIGTLWNGIATWAIEEMLPEMRQRLG CCCEEEEECCCCCCCCCHHHEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC IPDDHAFGYAMLFGKPAVRYARTVQHHPPEIYRVP CCCCCCCCCCEECCCHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure MIDFNVDSARCTRCGQCVADCPSRIIVMATGEYPSIAPGKEFSCLRCEHCLAVCPEAAIS CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHE ILGFSPDGSTPLKGNLPETDQLETLIAGRRSVRRYCPENLSPELIDKLITVASCAPTGVN EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC ARKVRFTVLDDREKTAHFRDEVMERLVRLLEEEALPESKAYYARFVKVWQKHKIDLVFRD CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEC APHLLIATAPKSLSTPRQDCVIALTTFELYAQACGIGTLWNGIATWAIEEMLPEMRQRLG CCCEEEEECCCCCCCCCHHHEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC IPDDHAFGYAMLFGKPAVRYARTVQHHPPEIYRVP CCCCCCCCCCEECCCHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA