| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673906
Identifier: 21673906
GI number: 21673906
Start: 1019875
End: 1020663
Strand: Direct
Name: 21673906
Synonym: CT1080
Alternate gene names: NA
Gene position: 1019875-1020663 (Clockwise)
Preceding gene: 21673901
Following gene: 21673910
Centisome position: 47.33
GC content: 55.64
Gene sequence:
>789_bases ATGAAAAAGCTTTTCGCTGTTTTTTTGGTTTTTGTCGCCATGGCACTGCTGCCCGTACTTGCTTCCGCAAAATCTGCTTC CGGGCCGCTCGCTTTCGGTCTTTACCGTTACGAACAGCACTCGAAAATCAATGCCGAGACCTACTGGAAATGCGACTATC CGGTATTCGAACGCTCGAAAGCTGGCGACATCATCAATGCGGCGATCCTGAAAGCGGTCATAAGCCAAGCCCCTTCGCCT GACTCGAAACCGGCGGCAGCGAGCATCGAAGCAGCGGCGAGCGCTTTCATCAAAGAGTGCGACGAGCAGATGAAAGATGC GCAGGCGCACTCCTGGGCGTGGCAATCAGAAACCAGCGGCGAGGTGCTGCTCGACCGGCCCGGCATGGTGACAGTTTCGA TCTTTACTTACGCCTTCACCGGCGGCGCACACGGCATGAGCGTCACACAATACCTGATTTTTGATACCGCCACCGGCAGG CCGCTTGGCCTGAACGACCTGTTCAAGCCGGGATTCGAGGCAATGCTCGACAAGCTGATCGAGCGCCGATTCCGGCAGAT GCGGGGCCTGTCGGCAACTGACCCGCTCAACGGTGAAAAGGGAGGACTGTTCGAGAACAAAATCACGCATAACGAGAACT TTGCCGTGACCGGTTCCGGCATCCGTTTCCTCTACAATCAGTACGAAATCGCTCCCTACGCCGCCGGTCAGATCACGGTC GATCTCTCTTTCGATGAGCTGAAAGGCATCCTTAAACCTTTGCCAGCACTCAAACCGATCAAGCCATGA
Upstream 100 bases:
>100_bases CTATCGCCAGATGGAAGACGTGGCCGGAGTGGACAGAGAGACTTGAAAACGGTACATTGTTGAAAGGAACCGCTCCGATC AATCGCTCATTTTTCCGATC
Downstream 100 bases:
>100_bases TGCGCTTCAACTGTCGATCCGCCGCGAAAAAACACGAGCATCGGGAGGACATATTCTTGAAACCTGGGTTGTTCCAACAT CCACAACTTTACATAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKKLFAVFLVFVAMALLPVLASAKSASGPLAFGLYRYEQHSKINAETYWKCDYPVFERSKAGDIINAAILKAVISQAPSP DSKPAAASIEAAASAFIKECDEQMKDAQAHSWAWQSETSGEVLLDRPGMVTVSIFTYAFTGGAHGMSVTQYLIFDTATGR PLGLNDLFKPGFEAMLDKLIERRFRQMRGLSATDPLNGEKGGLFENKITHNENFAVTGSGIRFLYNQYEIAPYAAGQITV DLSFDELKGILKPLPALKPIKP
Sequences:
>Translated_262_residues MKKLFAVFLVFVAMALLPVLASAKSASGPLAFGLYRYEQHSKINAETYWKCDYPVFERSKAGDIINAAILKAVISQAPSP DSKPAAASIEAAASAFIKECDEQMKDAQAHSWAWQSETSGEVLLDRPGMVTVSIFTYAFTGGAHGMSVTQYLIFDTATGR PLGLNDLFKPGFEAMLDKLIERRFRQMRGLSATDPLNGEKGGLFENKITHNENFAVTGSGIRFLYNQYEIAPYAAGQITV DLSFDELKGILKPLPALKPIKP >Mature_262_residues MKKLFAVFLVFVAMALLPVLASAKSASGPLAFGLYRYEQHSKINAETYWKCDYPVFERSKAGDIINAAILKAVISQAPSP DSKPAAASIEAAASAFIKECDEQMKDAQAHSWAWQSETSGEVLLDRPGMVTVSIFTYAFTGGAHGMSVTQYLIFDTATGR PLGLNDLFKPGFEAMLDKLIERRFRQMRGLSATDPLNGEKGGLFENKITHNENFAVTGSGIRFLYNQYEIAPYAAGQITV DLSFDELKGILKPLPALKPIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28666; Mature: 28666
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFAVFLVFVAMALLPVLASAKSASGPLAFGLYRYEQHSKINAETYWKCDYPVFERSK CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCEEEECCCCHHCCCC AGDIINAAILKAVISQAPSPDSKPAAASIEAAASAFIKECDEQMKDAQAHSWAWQSETSG CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC EVLLDRPGMVTVSIFTYAFTGGAHGMSVTQYLIFDTATGRPLGLNDLFKPGFEAMLDKLI CEEEECCCEEEEEEEEHHCCCCCCCHHHHEEEEEECCCCCCCCCHHHHCCCHHHHHHHHH ERRFRQMRGLSATDPLNGEKGGLFENKITHNENFAVTGSGIRFLYNQYEIAPYAAGQITV HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHEECEECCCEEEE DLSFDELKGILKPLPALKPIKP EECHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKKLFAVFLVFVAMALLPVLASAKSASGPLAFGLYRYEQHSKINAETYWKCDYPVFERSK CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCEEEECCCCHHCCCC AGDIINAAILKAVISQAPSPDSKPAAASIEAAASAFIKECDEQMKDAQAHSWAWQSETSG CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC EVLLDRPGMVTVSIFTYAFTGGAHGMSVTQYLIFDTATGRPLGLNDLFKPGFEAMLDKLI CEEEECCCEEEEEEEEHHCCCCCCCHHHHEEEEEECCCCCCCCCHHHHCCCHHHHHHHHH ERRFRQMRGLSATDPLNGEKGGLFENKITHNENFAVTGSGIRFLYNQYEIAPYAAGQITV HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHEECEECCCEEEE DLSFDELKGILKPLPALKPIKP EECHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA