| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673821
Identifier: 21673821
GI number: 21673821
Start: 942661
End: 944418
Strand: Direct
Name: 21673821
Synonym: CT0993
Alternate gene names: NA
Gene position: 942661-944418 (Clockwise)
Preceding gene: 21673816
Following gene: 21673822
Centisome position: 43.74
GC content: 38.4
Gene sequence:
>1758_bases GTGTGTAAAATGATTACTCGATTAACACTCAGAAATTTCAAGAATGTTCAAGAACAAACCTATGAGTTTACAGAGTTTGA TCTGCTGGTCGGACGAAATAATAGTGGAAAAAGTACAGTATTGCAGGCTATAGCTATCTGGCAATATTGTATAGATGAGT TTCATCGTTCAAACAGAAGCGGTACCAAAGGAATTCAGATTGTTCTGCCAAATTTTACTGCATTGCCTGTTCCAGAATTT AACTTGTTGTGGAGAAATAAGACTGATCGCGAGTATCCTTTTGAAGAGGGGAAGAAAAAACAGAAGTTTATTCTTATTCA AATTATAGTTGAGTGGAAAGTATCAGCTAACAAAAGAGAAGAGTTTGGTATAGATTTACGTTATCAGTCTCCGCAAACCA TTTATGCAATTCCGGAAGGGGGTTGGGGGCGATTCAGGGAATTAGAGGATATTTTGCCAAGAATTGCCTATGTTCCGCCA TTTTCGGGATTAGACCCTATGGAGAAGTGGTTGGATATCGCGCCTATTCGACAGCAAGTAGGAAAGGGTCAGCCGGGTAG TGTTTTGAGAAATTTGCTCTATAAAGTAAAACGTGATGAAGAGCGAGGCGATGATTGGGGTGAATTGGCAAGCATTGTAA AAAAGTGGTTCTCTGTTGAAATATGCGAACCTGTTTATGATAAAGAGAGAGATGTTCATATCAAAGTTGAATATCGTCAA AATGGAAAAGAGTTTGATATAATTTCTGGGGGAAGTGGTTTTCACCAGACCTTGACTTTGCTGGCCTTTTTATATGGTTA TAATCCGACAGTAATACTTCTTGATGAACCAGACGCCCATCTTCATGTCAATTTGCAGCGCGAAATTCTGGACTATTTCA AGCGAAAGTCTCAAGAAAAAAGTATCCAGTTTCTTATTGCTACTCACGCGGAAGAGTTTGCCAAAGGGGTCGATGCAAGC CAGATCATTTCTCTTATGGGTCAAGAACCTGAAAGAATAGAATCTGTCCCAAAAGTGATTCGGGCAATGGCTGAAGTTTC AAATGAAGACATTGTGAGAACTTTGGCTTACCCCTATATTGTGTATGTAGAAGGCGAAAGCGATGAGCGAATAATAAGAG CATGGTCTTCAGCATGTGGTGCCGATGAAGTTATAGATAAAGTCTGTTTCAAGGCTATGAGTGGCGGGGACAAGCAGAAG ATGAAAAAGTTTGCTGATAAGCATTTTGAGGCATTAAAGCAGATTGTCCCCAAGCTTCAGAGGATCATTCTTCTTGATTA CGACGAAAGCGAGGACTATCATCCGCAGAAAGACAATGAGGTTTTGTATGAGTGGCAAAGAAAAAATATCGAGAATTATC TTTTTGTTCCTGATGTTTGGAAGCGAGTTGCTTCAGAAAAGATCGGATTACCTGAAGGAGATTTGTTCTTGGAGCCAGTA TTACGTTTAATAGACGACTATTTTGAATCTCAAAACCTTGTATTGCCAAAAAAACAAAGCTGGAAAAATGTGTCTGCCGA AGTATTCAAAATTGTTGATGGCAAGAAGCTGTTATTTGAAAGAGATGATTCTTTGTTTCATCAATTAAGTAAATTGTTTC ATCAATTAAGTAAAAATAATCCATCGATACAGGTTTTGCGAGAGGAGATTGCCTTGAATATGAAACGAGAGGAGATTGCC TTGAATATGAAAGAGGAAGAAATTCATGAAGATGTGCATGAGTTCATGAATAAATTGAAATCATTATTTAACCCTTAG
Upstream 100 bases:
>100_bases ACTGTTCACTGTGAAGGTAAACTCTGGGAATGTTGATGAGCGATTAGGGAAAAAGAGCATGAGGATGTTACCTTTATTTG ATAAATAAATGTTATAAGGA
Downstream 100 bases:
>100_bases CCGAACTGAATAATAAAGTCGTAATAGCTAAGCCGTAGAACTCCGAAAACGCACATGTCCTACCAACCCAGCCACATACG CTTTTCACTCCCCGAATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: SMC Domain Protein; ATPase; SMC Domain-Containing Protein; RecF/RecN/SMC N Terminal Domain Protein; Initiation Factor 2 Associated Domain-Containing Protein
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MCKMITRLTLRNFKNVQEQTYEFTEFDLLVGRNNSGKSTVLQAIAIWQYCIDEFHRSNRSGTKGIQIVLPNFTALPVPEF NLLWRNKTDREYPFEEGKKKQKFILIQIIVEWKVSANKREEFGIDLRYQSPQTIYAIPEGGWGRFRELEDILPRIAYVPP FSGLDPMEKWLDIAPIRQQVGKGQPGSVLRNLLYKVKRDEERGDDWGELASIVKKWFSVEICEPVYDKERDVHIKVEYRQ NGKEFDIISGGSGFHQTLTLLAFLYGYNPTVILLDEPDAHLHVNLQREILDYFKRKSQEKSIQFLIATHAEEFAKGVDAS QIISLMGQEPERIESVPKVIRAMAEVSNEDIVRTLAYPYIVYVEGESDERIIRAWSSACGADEVIDKVCFKAMSGGDKQK MKKFADKHFEALKQIVPKLQRIILLDYDESEDYHPQKDNEVLYEWQRKNIENYLFVPDVWKRVASEKIGLPEGDLFLEPV LRLIDDYFESQNLVLPKKQSWKNVSAEVFKIVDGKKLLFERDDSLFHQLSKLFHQLSKNNPSIQVLREEIALNMKREEIA LNMKEEEIHEDVHEFMNKLKSLFNP
Sequences:
>Translated_585_residues MCKMITRLTLRNFKNVQEQTYEFTEFDLLVGRNNSGKSTVLQAIAIWQYCIDEFHRSNRSGTKGIQIVLPNFTALPVPEF NLLWRNKTDREYPFEEGKKKQKFILIQIIVEWKVSANKREEFGIDLRYQSPQTIYAIPEGGWGRFRELEDILPRIAYVPP FSGLDPMEKWLDIAPIRQQVGKGQPGSVLRNLLYKVKRDEERGDDWGELASIVKKWFSVEICEPVYDKERDVHIKVEYRQ NGKEFDIISGGSGFHQTLTLLAFLYGYNPTVILLDEPDAHLHVNLQREILDYFKRKSQEKSIQFLIATHAEEFAKGVDAS QIISLMGQEPERIESVPKVIRAMAEVSNEDIVRTLAYPYIVYVEGESDERIIRAWSSACGADEVIDKVCFKAMSGGDKQK MKKFADKHFEALKQIVPKLQRIILLDYDESEDYHPQKDNEVLYEWQRKNIENYLFVPDVWKRVASEKIGLPEGDLFLEPV LRLIDDYFESQNLVLPKKQSWKNVSAEVFKIVDGKKLLFERDDSLFHQLSKLFHQLSKNNPSIQVLREEIALNMKREEIA LNMKEEEIHEDVHEFMNKLKSLFNP >Mature_585_residues MCKMITRLTLRNFKNVQEQTYEFTEFDLLVGRNNSGKSTVLQAIAIWQYCIDEFHRSNRSGTKGIQIVLPNFTALPVPEF NLLWRNKTDREYPFEEGKKKQKFILIQIIVEWKVSANKREEFGIDLRYQSPQTIYAIPEGGWGRFRELEDILPRIAYVPP FSGLDPMEKWLDIAPIRQQVGKGQPGSVLRNLLYKVKRDEERGDDWGELASIVKKWFSVEICEPVYDKERDVHIKVEYRQ NGKEFDIISGGSGFHQTLTLLAFLYGYNPTVILLDEPDAHLHVNLQREILDYFKRKSQEKSIQFLIATHAEEFAKGVDAS QIISLMGQEPERIESVPKVIRAMAEVSNEDIVRTLAYPYIVYVEGESDERIIRAWSSACGADEVIDKVCFKAMSGGDKQK MKKFADKHFEALKQIVPKLQRIILLDYDESEDYHPQKDNEVLYEWQRKNIENYLFVPDVWKRVASEKIGLPEGDLFLEPV LRLIDDYFESQNLVLPKKQSWKNVSAEVFKIVDGKKLLFERDDSLFHQLSKLFHQLSKNNPSIQVLREEIALNMKREEIA LNMKEEEIHEDVHEFMNKLKSLFNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68307; Mature: 68307
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKMITRLTLRNFKNVQEQTYEFTEFDLLVGRNNSGKSTVLQAIAIWQYCIDEFHRSNRS CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC GTKGIQIVLPNFTALPVPEFNLLWRNKTDREYPFEEGKKKQKFILIQIIVEWKVSANKRE CCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHEEEEEEEEEHHCCCCCCH EFGIDLRYQSPQTIYAIPEGGWGRFRELEDILPRIAYVPPFSGLDPMEKWLDIAPIRQQV HCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GKGQPGSVLRNLLYKVKRDEERGDDWGELASIVKKWFSVEICEPVYDKERDVHIKVEYRQ CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEC NGKEFDIISGGSGFHQTLTLLAFLYGYNPTVILLDEPDAHLHVNLQREILDYFKRKSQEK CCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHHHHHHHHHHCCHHH SIQFLIATHAEEFAKGVDASQIISLMGQEPERIESVPKVIRAMAEVSNEDIVRTLAYPYI HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEE VYVEGESDERIIRAWSSACGADEVIDKVCFKAMSGGDKQKMKKFADKHFEALKQIVPKLQ EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH RIILLDYDESEDYHPQKDNEVLYEWQRKNIENYLFVPDVWKRVASEKIGLPEGDLFLEPV HEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCHHHHHHH LRLIDDYFESQNLVLPKKQSWKNVSAEVFKIVDGKKLLFERDDSLFHQLSKLFHQLSKNN HHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCC PSIQVLREEIALNMKREEIALNMKEEEIHEDVHEFMNKLKSLFNP CHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MCKMITRLTLRNFKNVQEQTYEFTEFDLLVGRNNSGKSTVLQAIAIWQYCIDEFHRSNRS CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC GTKGIQIVLPNFTALPVPEFNLLWRNKTDREYPFEEGKKKQKFILIQIIVEWKVSANKRE CCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHEEEEEEEEEHHCCCCCCH EFGIDLRYQSPQTIYAIPEGGWGRFRELEDILPRIAYVPPFSGLDPMEKWLDIAPIRQQV HCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GKGQPGSVLRNLLYKVKRDEERGDDWGELASIVKKWFSVEICEPVYDKERDVHIKVEYRQ CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEC NGKEFDIISGGSGFHQTLTLLAFLYGYNPTVILLDEPDAHLHVNLQREILDYFKRKSQEK CCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHHHHHHHHHHCCHHH SIQFLIATHAEEFAKGVDASQIISLMGQEPERIESVPKVIRAMAEVSNEDIVRTLAYPYI HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEE VYVEGESDERIIRAWSSACGADEVIDKVCFKAMSGGDKQKMKKFADKHFEALKQIVPKLQ EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH RIILLDYDESEDYHPQKDNEVLYEWQRKNIENYLFVPDVWKRVASEKIGLPEGDLFLEPV HEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCHHHHHHH LRLIDDYFESQNLVLPKKQSWKNVSAEVFKIVDGKKLLFERDDSLFHQLSKLFHQLSKNN HHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCC PSIQVLREEIALNMKREEIALNMKEEEIHEDVHEFMNKLKSLFNP CHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA