Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21673821

Identifier: 21673821

GI number: 21673821

Start: 942661

End: 944418

Strand: Direct

Name: 21673821

Synonym: CT0993

Alternate gene names: NA

Gene position: 942661-944418 (Clockwise)

Preceding gene: 21673816

Following gene: 21673822

Centisome position: 43.74

GC content: 38.4

Gene sequence:

>1758_bases
GTGTGTAAAATGATTACTCGATTAACACTCAGAAATTTCAAGAATGTTCAAGAACAAACCTATGAGTTTACAGAGTTTGA
TCTGCTGGTCGGACGAAATAATAGTGGAAAAAGTACAGTATTGCAGGCTATAGCTATCTGGCAATATTGTATAGATGAGT
TTCATCGTTCAAACAGAAGCGGTACCAAAGGAATTCAGATTGTTCTGCCAAATTTTACTGCATTGCCTGTTCCAGAATTT
AACTTGTTGTGGAGAAATAAGACTGATCGCGAGTATCCTTTTGAAGAGGGGAAGAAAAAACAGAAGTTTATTCTTATTCA
AATTATAGTTGAGTGGAAAGTATCAGCTAACAAAAGAGAAGAGTTTGGTATAGATTTACGTTATCAGTCTCCGCAAACCA
TTTATGCAATTCCGGAAGGGGGTTGGGGGCGATTCAGGGAATTAGAGGATATTTTGCCAAGAATTGCCTATGTTCCGCCA
TTTTCGGGATTAGACCCTATGGAGAAGTGGTTGGATATCGCGCCTATTCGACAGCAAGTAGGAAAGGGTCAGCCGGGTAG
TGTTTTGAGAAATTTGCTCTATAAAGTAAAACGTGATGAAGAGCGAGGCGATGATTGGGGTGAATTGGCAAGCATTGTAA
AAAAGTGGTTCTCTGTTGAAATATGCGAACCTGTTTATGATAAAGAGAGAGATGTTCATATCAAAGTTGAATATCGTCAA
AATGGAAAAGAGTTTGATATAATTTCTGGGGGAAGTGGTTTTCACCAGACCTTGACTTTGCTGGCCTTTTTATATGGTTA
TAATCCGACAGTAATACTTCTTGATGAACCAGACGCCCATCTTCATGTCAATTTGCAGCGCGAAATTCTGGACTATTTCA
AGCGAAAGTCTCAAGAAAAAAGTATCCAGTTTCTTATTGCTACTCACGCGGAAGAGTTTGCCAAAGGGGTCGATGCAAGC
CAGATCATTTCTCTTATGGGTCAAGAACCTGAAAGAATAGAATCTGTCCCAAAAGTGATTCGGGCAATGGCTGAAGTTTC
AAATGAAGACATTGTGAGAACTTTGGCTTACCCCTATATTGTGTATGTAGAAGGCGAAAGCGATGAGCGAATAATAAGAG
CATGGTCTTCAGCATGTGGTGCCGATGAAGTTATAGATAAAGTCTGTTTCAAGGCTATGAGTGGCGGGGACAAGCAGAAG
ATGAAAAAGTTTGCTGATAAGCATTTTGAGGCATTAAAGCAGATTGTCCCCAAGCTTCAGAGGATCATTCTTCTTGATTA
CGACGAAAGCGAGGACTATCATCCGCAGAAAGACAATGAGGTTTTGTATGAGTGGCAAAGAAAAAATATCGAGAATTATC
TTTTTGTTCCTGATGTTTGGAAGCGAGTTGCTTCAGAAAAGATCGGATTACCTGAAGGAGATTTGTTCTTGGAGCCAGTA
TTACGTTTAATAGACGACTATTTTGAATCTCAAAACCTTGTATTGCCAAAAAAACAAAGCTGGAAAAATGTGTCTGCCGA
AGTATTCAAAATTGTTGATGGCAAGAAGCTGTTATTTGAAAGAGATGATTCTTTGTTTCATCAATTAAGTAAATTGTTTC
ATCAATTAAGTAAAAATAATCCATCGATACAGGTTTTGCGAGAGGAGATTGCCTTGAATATGAAACGAGAGGAGATTGCC
TTGAATATGAAAGAGGAAGAAATTCATGAAGATGTGCATGAGTTCATGAATAAATTGAAATCATTATTTAACCCTTAG

Upstream 100 bases:

>100_bases
ACTGTTCACTGTGAAGGTAAACTCTGGGAATGTTGATGAGCGATTAGGGAAAAAGAGCATGAGGATGTTACCTTTATTTG
ATAAATAAATGTTATAAGGA

Downstream 100 bases:

>100_bases
CCGAACTGAATAATAAAGTCGTAATAGCTAAGCCGTAGAACTCCGAAAACGCACATGTCCTACCAACCCAGCCACATACG
CTTTTCACTCCCCGAATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: SMC Domain Protein; ATPase; SMC Domain-Containing Protein; RecF/RecN/SMC N Terminal Domain Protein; Initiation Factor 2 Associated Domain-Containing Protein

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MCKMITRLTLRNFKNVQEQTYEFTEFDLLVGRNNSGKSTVLQAIAIWQYCIDEFHRSNRSGTKGIQIVLPNFTALPVPEF
NLLWRNKTDREYPFEEGKKKQKFILIQIIVEWKVSANKREEFGIDLRYQSPQTIYAIPEGGWGRFRELEDILPRIAYVPP
FSGLDPMEKWLDIAPIRQQVGKGQPGSVLRNLLYKVKRDEERGDDWGELASIVKKWFSVEICEPVYDKERDVHIKVEYRQ
NGKEFDIISGGSGFHQTLTLLAFLYGYNPTVILLDEPDAHLHVNLQREILDYFKRKSQEKSIQFLIATHAEEFAKGVDAS
QIISLMGQEPERIESVPKVIRAMAEVSNEDIVRTLAYPYIVYVEGESDERIIRAWSSACGADEVIDKVCFKAMSGGDKQK
MKKFADKHFEALKQIVPKLQRIILLDYDESEDYHPQKDNEVLYEWQRKNIENYLFVPDVWKRVASEKIGLPEGDLFLEPV
LRLIDDYFESQNLVLPKKQSWKNVSAEVFKIVDGKKLLFERDDSLFHQLSKLFHQLSKNNPSIQVLREEIALNMKREEIA
LNMKEEEIHEDVHEFMNKLKSLFNP

Sequences:

>Translated_585_residues
MCKMITRLTLRNFKNVQEQTYEFTEFDLLVGRNNSGKSTVLQAIAIWQYCIDEFHRSNRSGTKGIQIVLPNFTALPVPEF
NLLWRNKTDREYPFEEGKKKQKFILIQIIVEWKVSANKREEFGIDLRYQSPQTIYAIPEGGWGRFRELEDILPRIAYVPP
FSGLDPMEKWLDIAPIRQQVGKGQPGSVLRNLLYKVKRDEERGDDWGELASIVKKWFSVEICEPVYDKERDVHIKVEYRQ
NGKEFDIISGGSGFHQTLTLLAFLYGYNPTVILLDEPDAHLHVNLQREILDYFKRKSQEKSIQFLIATHAEEFAKGVDAS
QIISLMGQEPERIESVPKVIRAMAEVSNEDIVRTLAYPYIVYVEGESDERIIRAWSSACGADEVIDKVCFKAMSGGDKQK
MKKFADKHFEALKQIVPKLQRIILLDYDESEDYHPQKDNEVLYEWQRKNIENYLFVPDVWKRVASEKIGLPEGDLFLEPV
LRLIDDYFESQNLVLPKKQSWKNVSAEVFKIVDGKKLLFERDDSLFHQLSKLFHQLSKNNPSIQVLREEIALNMKREEIA
LNMKEEEIHEDVHEFMNKLKSLFNP
>Mature_585_residues
MCKMITRLTLRNFKNVQEQTYEFTEFDLLVGRNNSGKSTVLQAIAIWQYCIDEFHRSNRSGTKGIQIVLPNFTALPVPEF
NLLWRNKTDREYPFEEGKKKQKFILIQIIVEWKVSANKREEFGIDLRYQSPQTIYAIPEGGWGRFRELEDILPRIAYVPP
FSGLDPMEKWLDIAPIRQQVGKGQPGSVLRNLLYKVKRDEERGDDWGELASIVKKWFSVEICEPVYDKERDVHIKVEYRQ
NGKEFDIISGGSGFHQTLTLLAFLYGYNPTVILLDEPDAHLHVNLQREILDYFKRKSQEKSIQFLIATHAEEFAKGVDAS
QIISLMGQEPERIESVPKVIRAMAEVSNEDIVRTLAYPYIVYVEGESDERIIRAWSSACGADEVIDKVCFKAMSGGDKQK
MKKFADKHFEALKQIVPKLQRIILLDYDESEDYHPQKDNEVLYEWQRKNIENYLFVPDVWKRVASEKIGLPEGDLFLEPV
LRLIDDYFESQNLVLPKKQSWKNVSAEVFKIVDGKKLLFERDDSLFHQLSKLFHQLSKNNPSIQVLREEIALNMKREEIA
LNMKEEEIHEDVHEFMNKLKSLFNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68307; Mature: 68307

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKMITRLTLRNFKNVQEQTYEFTEFDLLVGRNNSGKSTVLQAIAIWQYCIDEFHRSNRS
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC
GTKGIQIVLPNFTALPVPEFNLLWRNKTDREYPFEEGKKKQKFILIQIIVEWKVSANKRE
CCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHEEEEEEEEEHHCCCCCCH
EFGIDLRYQSPQTIYAIPEGGWGRFRELEDILPRIAYVPPFSGLDPMEKWLDIAPIRQQV
HCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
GKGQPGSVLRNLLYKVKRDEERGDDWGELASIVKKWFSVEICEPVYDKERDVHIKVEYRQ
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEC
NGKEFDIISGGSGFHQTLTLLAFLYGYNPTVILLDEPDAHLHVNLQREILDYFKRKSQEK
CCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHHHHHHHHHHCCHHH
SIQFLIATHAEEFAKGVDASQIISLMGQEPERIESVPKVIRAMAEVSNEDIVRTLAYPYI
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEE
VYVEGESDERIIRAWSSACGADEVIDKVCFKAMSGGDKQKMKKFADKHFEALKQIVPKLQ
EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RIILLDYDESEDYHPQKDNEVLYEWQRKNIENYLFVPDVWKRVASEKIGLPEGDLFLEPV
HEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCHHHHHHH
LRLIDDYFESQNLVLPKKQSWKNVSAEVFKIVDGKKLLFERDDSLFHQLSKLFHQLSKNN
HHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCC
PSIQVLREEIALNMKREEIALNMKEEEIHEDVHEFMNKLKSLFNP
CHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCKMITRLTLRNFKNVQEQTYEFTEFDLLVGRNNSGKSTVLQAIAIWQYCIDEFHRSNRS
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC
GTKGIQIVLPNFTALPVPEFNLLWRNKTDREYPFEEGKKKQKFILIQIIVEWKVSANKRE
CCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHEEEEEEEEEHHCCCCCCH
EFGIDLRYQSPQTIYAIPEGGWGRFRELEDILPRIAYVPPFSGLDPMEKWLDIAPIRQQV
HCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
GKGQPGSVLRNLLYKVKRDEERGDDWGELASIVKKWFSVEICEPVYDKERDVHIKVEYRQ
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEC
NGKEFDIISGGSGFHQTLTLLAFLYGYNPTVILLDEPDAHLHVNLQREILDYFKRKSQEK
CCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHHHHHHHHHHCCHHH
SIQFLIATHAEEFAKGVDASQIISLMGQEPERIESVPKVIRAMAEVSNEDIVRTLAYPYI
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEE
VYVEGESDERIIRAWSSACGADEVIDKVCFKAMSGGDKQKMKKFADKHFEALKQIVPKLQ
EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RIILLDYDESEDYHPQKDNEVLYEWQRKNIENYLFVPDVWKRVASEKIGLPEGDLFLEPV
HEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCHHHHHHH
LRLIDDYFESQNLVLPKKQSWKNVSAEVFKIVDGKKLLFERDDSLFHQLSKLFHQLSKNN
HHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCC
PSIQVLREEIALNMKREEIALNMKEEEIHEDVHEFMNKLKSLFNP
CHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA