Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673799

Identifier: 21673799

GI number: 21673799

Start: 917272

End: 918036

Strand: Direct

Name: 21673799

Synonym: CT0971

Alternate gene names: NA

Gene position: 917272-918036 (Clockwise)

Preceding gene: 21673798

Following gene: 21673806

Centisome position: 42.57

GC content: 54.38

Gene sequence:

>765_bases
ATGTTCGATCATGCCGATCGAGACGATCCGGTCGAATTCGCCTTCGAGCTGGCGATAGTCCATGAGCAGGATATCGACGT
CGAAATCCTTGCAGAGCTCTCTGGCAAAGCTGGCCTGTTCCTTCGATACGGTGATGCCAACCACCTGCACGCCATAGTGT
TCAGCGGCGAACCTCGCGGCCCCGCCCCAGCCGCATCCAATATCGAGCAGTTTCATCCCCGGTTTGAGGTCGAGCTTTTC
GAACACCAGGCAAAGCTTGTTTTGCTGTGCTTCATCGAGGCTGTCGGCTTCGTGCCAGTAGGCGCAACTGTACATCATGA
GCGGGTCGAGCATCGCCCGAAAGAGGTCGTTGCCAGCGTCGTAATGGTGCTTGCCAACAGTGAAGGCGCGCGCCGGTTTT
TGCAAGTTTATCAGCGCACCCTGAAGATACTCCAGCGCCGAGGCAAGTGTGACGAGCTGTTGGTCGACGCCTGCCGAGAG
TATCCGGTAAAACAGCTCTTCGAGGTCATCGCAATCCCACCAGCCCTCCATGTAGGACTCTCCGAAACCGAGATTTCCCT
GAAGCATCGTTTTTCTGAACATCCGGCGATCATGCACCCTGATGTCCCACGGCCTGTTGCCGTTGATGGTGATGTTTGCC
GCAGCGAGGAGTGTCTCGAATTTTTGCTGGAAAAGGTGGTCAAGCATGGCGCAGTGCTCTGGTTTTCGAGGAAACATTCT
GTTTCACAAAATGGAGAGACCGATACTAACTGCTTTAAAAAATAG

Upstream 100 bases:

>100_bases
CCGACTCGTTGCTGCCGATGCTCTGTACGAGCATCCGTCCATCCGGTTTGAGGCAGCGTCGGGCGGTATCAAAGTAGGTC
CGGTAGTTTTTATAGCCGAC

Downstream 100 bases:

>100_bases
TGTATGCACGACGAAATGTCAAAAAGATGCCCGATAGGGCAAGATCATGTCAAGAGTGATGGATGGGCGCTGTTCTTTGA
GTTTTAACTTTTCAATGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MFDHADRDDPVEFAFELAIVHEQDIDVEILAELSGKAGLFLRYGDANHLHAIVFSGEPRGPAPAASNIEQFHPRFEVELF
EHQAKLVLLCFIEAVGFVPVGATVHHERVEHRPKEVVASVVMVLANSEGARRFLQVYQRTLKILQRRGKCDELLVDACRE
YPVKQLFEVIAIPPALHVGLSETEISLKHRFSEHPAIMHPDVPRPVAVDGDVCRSEECLEFLLEKVVKHGAVLWFSRKHS
VSQNGETDTNCFKK

Sequences:

>Translated_254_residues
MFDHADRDDPVEFAFELAIVHEQDIDVEILAELSGKAGLFLRYGDANHLHAIVFSGEPRGPAPAASNIEQFHPRFEVELF
EHQAKLVLLCFIEAVGFVPVGATVHHERVEHRPKEVVASVVMVLANSEGARRFLQVYQRTLKILQRRGKCDELLVDACRE
YPVKQLFEVIAIPPALHVGLSETEISLKHRFSEHPAIMHPDVPRPVAVDGDVCRSEECLEFLLEKVVKHGAVLWFSRKHS
VSQNGETDTNCFKK
>Mature_254_residues
MFDHADRDDPVEFAFELAIVHEQDIDVEILAELSGKAGLFLRYGDANHLHAIVFSGEPRGPAPAASNIEQFHPRFEVELF
EHQAKLVLLCFIEAVGFVPVGATVHHERVEHRPKEVVASVVMVLANSEGARRFLQVYQRTLKILQRRGKCDELLVDACRE
YPVKQLFEVIAIPPALHVGLSETEISLKHRFSEHPAIMHPDVPRPVAVDGDVCRSEECLEFLLEKVVKHGAVLWFSRKHS
VSQNGETDTNCFKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28655; Mature: 28655

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDHADRDDPVEFAFELAIVHEQDIDVEILAELSGKAGLFLRYGDANHLHAIVFSGEPRG
CCCCCCCCCHHHHHHEEEEEECCCCCHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCC
PAPAASNIEQFHPRFEVELFEHQAKLVLLCFIEAVGFVPVGATVHHERVEHRPKEVVASV
CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHH
VMVLANSEGARRFLQVYQRTLKILQRRGKCDELLVDACREYPVKQLFEVIAIPPALHVGL
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHCCC
SETEISLKHRFSEHPAIMHPDVPRPVAVDGDVCRSEECLEFLLEKVVKHGAVLWFSRKHS
CHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC
VSQNGETDTNCFKK
CCCCCCCCHHHHCC
>Mature Secondary Structure
MFDHADRDDPVEFAFELAIVHEQDIDVEILAELSGKAGLFLRYGDANHLHAIVFSGEPRG
CCCCCCCCCHHHHHHEEEEEECCCCCHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCC
PAPAASNIEQFHPRFEVELFEHQAKLVLLCFIEAVGFVPVGATVHHERVEHRPKEVVASV
CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHH
VMVLANSEGARRFLQVYQRTLKILQRRGKCDELLVDACREYPVKQLFEVIAIPPALHVGL
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHCCC
SETEISLKHRFSEHPAIMHPDVPRPVAVDGDVCRSEECLEFLLEKVVKHGAVLWFSRKHS
CHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC
VSQNGETDTNCFKK
CCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA