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The map label for this gene is ybeQ [H]

Identifier: 21673786

GI number: 21673786

Start: 905155

End: 905901

Strand: Direct

Name: ybeQ [H]

Synonym: CT0958

Alternate gene names: 21673786

Gene position: 905155-905901 (Clockwise)

Preceding gene: 21673784

Following gene: 21673787

Centisome position: 42.0

GC content: 50.47

Gene sequence:

>747_bases
ATGAAGCGTTTTGTTTTCAGCGGTTTTGCTGTGTTTATGCTTGCTGCTCCTGTGACGGGGCATTGCCGGGATTATCAAAT
GAATGACTCATCACCGGAAGCATCGGTCCGTCGGGACGCGGATACTGATAAAGATGCTGCCCAAAAAGAGTATCTCATCG
CGATGAAATACTATTATGGCCGTGATGTGGATCGTGATTATGCCGAGGCGCTCAAATGGCTCAGATTGTCAGCCGCGAAA
GGCAATGATGCTGCGGAGTACGCAATAGGATTCATGTACCAGAAGGGACTGGGTGTTCCACAGGACTATGCCGAGGCGAT
GAAATGGTACCGGCTCGCTGCTGCCAAAGATAACGATAATGCCCAGAACCAGATCGGTTACCTGTATCATCATGGATGGG
GTGTGGAGACTGATTATGCCGAGGCGATGAAATGGTACCGCATATCGGCTGCCAAAGGGAATTTTGCTGCTGAAGACAAT
ATCGGGGTGCTCTATGAACATGGTCAGGGCGTAGAACAGGACTATGCTGAGGCAATGAGATGGTACCGCATATCGGCAGC
CAAGGGCAACGGCGAGGCTGAACTCAATATTGGCAATTTTTATCAGCATGGTTTGGGCGTTGAGCTTGATCTTAACAAAG
CTGTAAAATGGTATCGGTCGGCAGCGGCCAAAGGCAACGAGGAAGCTGCGCAAAAGCTCAGTGCCATGAAGAGCGGCAGT
GTGTTGCCTGACGTGCACCATGAGTAA

Upstream 100 bases:

>100_bases
TAGGCGGCTTGTGAATTACAGGTAAGATTTATTATTGTAACAATATAAAGTTTATCCATTTCTTATGGGTCTGTGCTGTT
CAACCAGAATTAAAATTTTC

Downstream 100 bases:

>100_bases
GCCGGATGCTTCGTATCCAAATGCCGATTGAAATCGGAAAATTGAACCGGCCGTTGATTTCGATCTGGGCAGGGATGGGC
TATCACCAGGGGTTGACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKRFVFSGFAVFMLAAPVTGHCRDYQMNDSSPEASVRRDADTDKDAAQKEYLIAMKYYYGRDVDRDYAEALKWLRLSAAK
GNDAAEYAIGFMYQKGLGVPQDYAEAMKWYRLAAAKDNDNAQNQIGYLYHHGWGVETDYAEAMKWYRISAAKGNFAAEDN
IGVLYEHGQGVEQDYAEAMRWYRISAAKGNGEAELNIGNFYQHGLGVELDLNKAVKWYRSAAAKGNEEAAQKLSAMKSGS
VLPDVHHE

Sequences:

>Translated_248_residues
MKRFVFSGFAVFMLAAPVTGHCRDYQMNDSSPEASVRRDADTDKDAAQKEYLIAMKYYYGRDVDRDYAEALKWLRLSAAK
GNDAAEYAIGFMYQKGLGVPQDYAEAMKWYRLAAAKDNDNAQNQIGYLYHHGWGVETDYAEAMKWYRISAAKGNFAAEDN
IGVLYEHGQGVEQDYAEAMRWYRISAAKGNGEAELNIGNFYQHGLGVELDLNKAVKWYRSAAAKGNEEAAQKLSAMKSGS
VLPDVHHE
>Mature_248_residues
MKRFVFSGFAVFMLAAPVTGHCRDYQMNDSSPEASVRRDADTDKDAAQKEYLIAMKYYYGRDVDRDYAEALKWLRLSAAK
GNDAAEYAIGFMYQKGLGVPQDYAEAMKWYRLAAAKDNDNAQNQIGYLYHHGWGVETDYAEAMKWYRISAAKGNFAAEDN
IGVLYEHGQGVEQDYAEAMRWYRISAAKGNGEAELNIGNFYQHGLGVELDLNKAVKWYRSAAAKGNEEAAQKLSAMKSGS
VLPDVHHE

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=167, Percent_Identity=33.5329341317365, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI19923669, Length=167, Percent_Identity=28.7425149700599, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI217330658, Length=224, Percent_Identity=24.5535714285714, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI217330656, Length=224, Percent_Identity=24.5535714285714, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI87081769, Length=181, Percent_Identity=40.3314917127072, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1786867, Length=129, Percent_Identity=31.7829457364341, Blast_Score=80, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17563256, Length=171, Percent_Identity=27.4853801169591, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6319410, Length=202, Percent_Identity=29.2079207920792, Blast_Score=62, Evalue=8e-11,
Organism=Drosophila melanogaster, GI21355295, Length=140, Percent_Identity=30.7142857142857, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 27878; Mature: 27878

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFVFSGFAVFMLAAPVTGHCRDYQMNDSSPEASVRRDADTDKDAAQKEYLIAMKYYYG
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHEEEHHHHC
RDVDRDYAEALKWLRLSAAKGNDAAEYAIGFMYQKGLGVPQDYAEAMKWYRLAAAKDNDN
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
AQNQIGYLYHHGWGVETDYAEAMKWYRISAAKGNFAAEDNIGVLYEHGQGVEQDYAEAMR
CHHHCEEEEECCCCCCCCHHHHHHHHEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
WYRISAAKGNGEAELNIGNFYQHGLGVELDLNKAVKWYRSAAAKGNEEAAQKLSAMKSGS
HHEEEECCCCCEEEEEECHHHHCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
VLPDVHHE
CCCCCCCC
>Mature Secondary Structure
MKRFVFSGFAVFMLAAPVTGHCRDYQMNDSSPEASVRRDADTDKDAAQKEYLIAMKYYYG
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHEEEHHHHC
RDVDRDYAEALKWLRLSAAKGNDAAEYAIGFMYQKGLGVPQDYAEAMKWYRLAAAKDNDN
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
AQNQIGYLYHHGWGVETDYAEAMKWYRISAAKGNFAAEDNIGVLYEHGQGVEQDYAEAMR
CHHHCEEEEECCCCCCCCHHHHHHHHEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
WYRISAAKGNGEAELNIGNFYQHGLGVELDLNKAVKWYRSAAAKGNEEAAQKLSAMKSGS
HHEEEECCCCCEEEEEECHHHHCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
VLPDVHHE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]