| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673785
Identifier: 21673785
GI number: 21673785
Start: 904008
End: 905042
Strand: Reverse
Name: 21673785
Synonym: CT0957
Alternate gene names: NA
Gene position: 905042-904008 (Counterclockwise)
Preceding gene: 21673790
Following gene: 21673783
Centisome position: 42.0
GC content: 52.37
Gene sequence:
>1035_bases ATGAAATTTTCCAGCACAAGCACTCTTTTTTTACTACTTCTTAGCTGTCTGTGCGCTCCATCACGAAACGGAATGTGCAA AGAGCAGCCGCAGCAGATTCTCGTCATGTGGTGGAATGTCGAAAACCTTTTTGATACGAAAAACGATCCGAAGGTTGATG ACCAGGAGTTCACCCCAATGGGCAAAGCACACTGGACGGAAAAAAAGTTGCTGTTGAAGCGGTTGCGCATCGCACAGGTC TTCAACGCGATCAGGGCCGAGCGTGAGTATGGGAAATATCCGGATATTGTGGCATTTGCTGAAACCGAAAACCGGCAGGT TTTCGCGGGCACGCTGGCGGCTCTCGACCGCGCCACTTACGCCATCGACTATCACGAAAGTCCCGATCCCAGAGGCATCG ACATTGGCCTTGCATGGAATCCTGCCACAGTGAAATTCACCGGTTCGAAGCCCTATAAGGTACGCCTAAATAACAGACGC GGCACCCGGTTCGTCATCGCTGCCGGCTTCACGGCTGCCAGCAACCACTTTACCATCGTGCTGAATCACTGGCCTTCGCG CTCGTTCGACACCCAGTGGAGCGAAACGAATCGCATCGCAGCCGCAAGAGTTGCACGGCACATCGTTGACAGCCTCAGAA CCTGCAATCCACAGAGCGAGATCATCGTCATGGGTGATTTCAACGATCAACCCGAAAATCATTCGGTCAAAGACGTTCTC GGCTCATCATTTGACAGAAAAGCGGTTCGACATGCCAGCAGCAGACTTCTTTACAACTGCTGGAACGAGGCGTCATCTCC CGGCAGTTACTTTTACAGGAATCATTGGGAACAGATCGACCAGATGCTGGTTTCAGCCGCATTGCTCGACGAGAAGGGAC TCTCGATCGACAAAACGAGCTTCCGGGTTTTCTCCATTCCGGCGATGTTCGACCGGTTCGGAAAAGGGCTCTATTCCACC TACAAACAAGGCAAGTTCAAAGGCGGCTACTCCGACCACCTGCCGCTATTGCTGAAGGTTCGCATCAAACCGTAG
Upstream 100 bases:
>100_bases TCTGGTTGAACAGCACAGACCCATAAGAAATGGATAAACTTTATATTGTTACAATAATAAATCTTACCTGTAATTCACAA GCCGCCTATCCGGGATACTG
Downstream 100 bases:
>100_bases CCAGCAACCGGGCCACCATTGCCATCCATTGCTAAAACAGTTTCTATCCGGATACGATAATCATAAAAACGATAGCCTCC ATAAAACAGCCGAGGCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family; Endonuclease
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MKFSSTSTLFLLLLSCLCAPSRNGMCKEQPQQILVMWWNVENLFDTKNDPKVDDQEFTPMGKAHWTEKKLLLKRLRIAQV FNAIRAEREYGKYPDIVAFAETENRQVFAGTLAALDRATYAIDYHESPDPRGIDIGLAWNPATVKFTGSKPYKVRLNNRR GTRFVIAAGFTAASNHFTIVLNHWPSRSFDTQWSETNRIAAARVARHIVDSLRTCNPQSEIIVMGDFNDQPENHSVKDVL GSSFDRKAVRHASSRLLYNCWNEASSPGSYFYRNHWEQIDQMLVSAALLDEKGLSIDKTSFRVFSIPAMFDRFGKGLYST YKQGKFKGGYSDHLPLLLKVRIKP
Sequences:
>Translated_344_residues MKFSSTSTLFLLLLSCLCAPSRNGMCKEQPQQILVMWWNVENLFDTKNDPKVDDQEFTPMGKAHWTEKKLLLKRLRIAQV FNAIRAEREYGKYPDIVAFAETENRQVFAGTLAALDRATYAIDYHESPDPRGIDIGLAWNPATVKFTGSKPYKVRLNNRR GTRFVIAAGFTAASNHFTIVLNHWPSRSFDTQWSETNRIAAARVARHIVDSLRTCNPQSEIIVMGDFNDQPENHSVKDVL GSSFDRKAVRHASSRLLYNCWNEASSPGSYFYRNHWEQIDQMLVSAALLDEKGLSIDKTSFRVFSIPAMFDRFGKGLYST YKQGKFKGGYSDHLPLLLKVRIKP >Mature_344_residues MKFSSTSTLFLLLLSCLCAPSRNGMCKEQPQQILVMWWNVENLFDTKNDPKVDDQEFTPMGKAHWTEKKLLLKRLRIAQV FNAIRAEREYGKYPDIVAFAETENRQVFAGTLAALDRATYAIDYHESPDPRGIDIGLAWNPATVKFTGSKPYKVRLNNRR GTRFVIAAGFTAASNHFTIVLNHWPSRSFDTQWSETNRIAAARVARHIVDSLRTCNPQSEIIVMGDFNDQPENHSVKDVL GSSFDRKAVRHASSRLLYNCWNEASSPGSYFYRNHWEQIDQMLVSAALLDEKGLSIDKTSFRVFSIPAMFDRFGKGLYST YKQGKFKGGYSDHLPLLLKVRIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39257; Mature: 39257
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSSTSTLFLLLLSCLCAPSRNGMCKEQPQQILVMWWNVENLFDTKNDPKVDDQEFTPM CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCC GKAHWTEKKLLLKRLRIAQVFNAIRAEREYGKYPDIVAFAETENRQVFAGTLAALDRATY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHEE AIDYHESPDPRGIDIGLAWNPATVKFTGSKPYKVRLNNRRGTRFVIAAGFTAASNHFTIV EEEECCCCCCCCEEEEEEECCEEEEECCCCCEEEEECCCCCCEEEEEECCEECCCCEEEE LNHWPSRSFDTQWSETNRIAAARVARHIVDSLRTCNPQSEIIVMGDFNDQPENHSVKDVL EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHH GSSFDRKAVRHASSRLLYNCWNEASSPGSYFYRNHWEQIDQMLVSAALLDEKGLSIDKTS CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC FRVFSIPAMFDRFGKGLYSTYKQGKFKGGYSDHLPLLLKVRIKP EEEEECHHHHHHHCHHHHHHHHCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MKFSSTSTLFLLLLSCLCAPSRNGMCKEQPQQILVMWWNVENLFDTKNDPKVDDQEFTPM CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCC GKAHWTEKKLLLKRLRIAQVFNAIRAEREYGKYPDIVAFAETENRQVFAGTLAALDRATY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHEE AIDYHESPDPRGIDIGLAWNPATVKFTGSKPYKVRLNNRRGTRFVIAAGFTAASNHFTIV EEEECCCCCCCCEEEEEEECCEEEEECCCCCEEEEECCCCCCEEEEEECCEECCCCEEEE LNHWPSRSFDTQWSETNRIAAARVARHIVDSLRTCNPQSEIIVMGDFNDQPENHSVKDVL EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHH GSSFDRKAVRHASSRLLYNCWNEASSPGSYFYRNHWEQIDQMLVSAALLDEKGLSIDKTS CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC FRVFSIPAMFDRFGKGLYSTYKQGKFKGGYSDHLPLLLKVRIKP EEEEECHHHHHHHCHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA