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The map label for this gene is yvrC [H]

Identifier: 21673758

GI number: 21673758

Start: 878620

End: 879519

Strand: Reverse

Name: yvrC [H]

Synonym: CT0930

Alternate gene names: 21673758

Gene position: 879519-878620 (Counterclockwise)

Preceding gene: 21673759

Following gene: 21673757

Centisome position: 40.81

GC content: 59.78

Gene sequence:

>900_bases
ATGCCCGTTCGCTCGAAAAGTAACCGCCTGACTCCCCTTTTCATCCTTCTCGCCCTCTGCCTGCAAACGCTGGCAGGGTG
TTCGAAACCGCAGGCTTCCGACAAAACAGAGCCGACGAAATCGCAAGCGCCGCAGCGCATCGTCAGCCTTGCGCCGAGCC
TGACCGAGATGCTTTACGCCATCGGTGCGGGGCCACAGCTTGTCGGCAGAACCAGCGCGTGCGACTGGCCCGCCGAAGCC
AAAAAAGTACCGGTGGTCGGCTCCTTCGGACGCCCGTCGCTGGAGATGCTCGCTTCGATGAATCCTGACCTCGTGCTGGA
CGTCGATCTGGCCGACGATCAAACGGCAAAAAAAATGGAAGAGATGCATATCCGCCGCGAGCACATCCGCTGTCAGGATC
CCAAAGAACTGCCCGCCGCGCTCCGCAAGCTCGGCACGCTCACCGGCCACACACGGCAGGCGGACAGCCTCGCGACGGTG
ATCGAGCAAGGGCTGGCGAAGTATCGAAAAGAGGCTGACGCGAAACAGCACAAAATGCGCATCTATCTTGAAATCTGGAA
CGATCCTCTCTGGACAGGCGGGAGCAACAGTTTCGTATCGCAACTGATCGCGCTTGCCGGTGGCCGCAACATTGGCGACG
CGGTCGAGAAGGAATATTTCGAGGTCTCGCCCGAGTGGGTCATCCGCCAAAATCCCGACCTGATCGCCTGCATGTACATG
GCGAACCAGACCCCGGCAGCCGACAATGTGAAAAAGCGCCCCGGCTGGCAGGGCATCAGCGCCGTGCGCAACAATCGGGT
CTATGACAACTTCGACAACCGTCTCTACCTGCGCCCCGGACCGCGCATCCTCGAAGGCATCGCCGGAATGAAAAAGCTGA
TCGAGAGCAATGAACAGTAA

Upstream 100 bases:

>100_bases
CAGTCGCAACCAGAGGAGGTCGCCGACATGGCGTGGTTCGCGCTCGACGATGCACTTTCGATGCCGATCGCTTTCACCCA
TAACCTTGTCCTGCAACACT

Downstream 100 bases:

>100_bases
CGCCACGACCAAGAGGAACGCGACGATCAATACCCGACAGAGCCGGGCGTTCCTCGTCGCCGCGCCGTCGAGCGGCTCCG
GCAAAACAACGATCACCCTC

Product: ABC transporter, periplasmic substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MPVRSKSNRLTPLFILLALCLQTLAGCSKPQASDKTEPTKSQAPQRIVSLAPSLTEMLYAIGAGPQLVGRTSACDWPAEA
KKVPVVGSFGRPSLEMLASMNPDLVLDVDLADDQTAKKMEEMHIRREHIRCQDPKELPAALRKLGTLTGHTRQADSLATV
IEQGLAKYRKEADAKQHKMRIYLEIWNDPLWTGGSNSFVSQLIALAGGRNIGDAVEKEYFEVSPEWVIRQNPDLIACMYM
ANQTPAADNVKKRPGWQGISAVRNNRVYDNFDNRLYLRPGPRILEGIAGMKKLIESNEQ

Sequences:

>Translated_299_residues
MPVRSKSNRLTPLFILLALCLQTLAGCSKPQASDKTEPTKSQAPQRIVSLAPSLTEMLYAIGAGPQLVGRTSACDWPAEA
KKVPVVGSFGRPSLEMLASMNPDLVLDVDLADDQTAKKMEEMHIRREHIRCQDPKELPAALRKLGTLTGHTRQADSLATV
IEQGLAKYRKEADAKQHKMRIYLEIWNDPLWTGGSNSFVSQLIALAGGRNIGDAVEKEYFEVSPEWVIRQNPDLIACMYM
ANQTPAADNVKKRPGWQGISAVRNNRVYDNFDNRLYLRPGPRILEGIAGMKKLIESNEQ
>Mature_298_residues
PVRSKSNRLTPLFILLALCLQTLAGCSKPQASDKTEPTKSQAPQRIVSLAPSLTEMLYAIGAGPQLVGRTSACDWPAEAK
KVPVVGSFGRPSLEMLASMNPDLVLDVDLADDQTAKKMEEMHIRREHIRCQDPKELPAALRKLGTLTGHTRQADSLATVI
EQGLAKYRKEADAKQHKMRIYLEIWNDPLWTGGSNSFVSQLIALAGGRNIGDAVEKEYFEVSPEWVIRQNPDLIACMYMA
NQTPAADNVKKRPGWQGISAVRNNRVYDNFDNRLYLRPGPRILEGIAGMKKLIESNEQ

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=201, Percent_Identity=25.3731343283582, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 33208; Mature: 33076

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVRSKSNRLTPLFILLALCLQTLAGCSKPQASDKTEPTKSQAPQRIVSLAPSLTEMLYA
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IGAGPQLVGRTSACDWPAEAKKVPVVGSFGRPSLEMLASMNPDLVLDVDLADDQTAKKME
HCCCCHHHCCCCCCCCCHHCCCCCEEECCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHH
EMHIRREHIRCQDPKELPAALRKLGTLTGHTRQADSLATVIEQGLAKYRKEADAKQHKMR
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEE
IYLEIWNDPLWTGGSNSFVSQLIALAGGRNIGDAVEKEYFEVSPEWVIRQNPDLIACMYM
EEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEE
ANQTPAADNVKKRPGWQGISAVRNNRVYDNFDNRLYLRPGPRILEGIAGMKKLIESNEQ
CCCCCCCCCCCCCCCCHHHHHHHCCCCEECCCCEEEECCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PVRSKSNRLTPLFILLALCLQTLAGCSKPQASDKTEPTKSQAPQRIVSLAPSLTEMLYA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IGAGPQLVGRTSACDWPAEAKKVPVVGSFGRPSLEMLASMNPDLVLDVDLADDQTAKKME
HCCCCHHHCCCCCCCCCHHCCCCCEEECCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHH
EMHIRREHIRCQDPKELPAALRKLGTLTGHTRQADSLATVIEQGLAKYRKEADAKQHKMR
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEE
IYLEIWNDPLWTGGSNSFVSQLIALAGGRNIGDAVEKEYFEVSPEWVIRQNPDLIACMYM
EEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEE
ANQTPAADNVKKRPGWQGISAVRNNRVYDNFDNRLYLRPGPRILEGIAGMKKLIESNEQ
CCCCCCCCCCCCCCCCHHHHHHHCCCCEECCCCEEEECCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]