Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is mod [H]

Identifier: 21673736

GI number: 21673736

Start: 858864

End: 860873

Strand: Direct

Name: mod [H]

Synonym: CT0908

Alternate gene names: 21673736

Gene position: 858864-860873 (Clockwise)

Preceding gene: 21673735

Following gene: 21673737

Centisome position: 39.86

GC content: 58.06

Gene sequence:

>2010_bases
ATGAAACAACTGACCGCCAACGACCCCGAGACCCGAAGCCACGACCTTGTCGCCGAGAACATCGCCCGGCTCAAGGCCCT
GTTCCCGGAACTGGTGACCGAAGGCCCGGACGGCGCCGCCGTGAACATGGACGTGCTCAAGCAATTGGTGGGTGACAAAA
CCGTCACCGACTGTGATGAGAAGTACGGCCTCAACTGGCACGGCAAGCGCCGCGCCCGGCAGCTCGCGCTCACGCCCTCC
ACCGGCACGCTGCGCCCCTGCCCTGAAGACAGCGTGGACTGGGACACCACGCAGAACCTGATGATCGAGGGCGACAACCT
GGAGGTGCTGAAGCTGCTGCAAAAGAGCTACGCGGGGAAGATAAAGCTCATCTACATCGACCCGCCGTACAACACGGGCA
AGGACTTCGTCTATCCCGACGACTTCAAGGACAACATCAGGAACTATCTGGAGCTGACCGGGCAGGTCGAAGGCGGGCGG
AAGATCAGCAGCAACACCGAAGCCAGCGGGCGGTTTCACACGGACTGGCTGAACATGATGTATCCGAGGTTGAAGATTGC
TCGTCAACTCCTTTCGCCCACTGGTGTGATCGCTGTACATATTGACGAACACGAGTTAGAAGCCCTTGTGATAGTACTCC
GCGATTTGTTTGGCGAAGAAAATGAACTCGGAGTTACGATATGGGATAAACGCAATCCGAAGGGTGATTCGCGAGGAATC
GCCTACCAACATGAATCACTTGTGCTCTTTGCGCGAGATGCAGAGGAATTGTTTGCACGTTCGCCAGTTCGTCGGGCGAA
ACGCAACGCCGAGCGGATGCTAAACGCAGCATCGCGATTTGTTACGGAATGCGGAAGCATCGCCGAAGCAAGAGCAGCTT
ATCGTAGTTGGGTCAAATCTCAGTCCACACTCTCTGGCGGTGAGTCGATGTACGACAAACTGAGCGAGACAGGACGTGTC
TATAGGTTGGTATCGATGGCCTGGCCAAACAAGAAGCGTGCGCCCGCTGACTATTTCGTGCCCCTGAAGCACCCTATCAC
TGGCAAGGATTGCCCCATCCCAGAGCGGGGTTGGCGCAATCCTCCTGCAACAATGAAAAAACTTTTGGAAGATGGGCTTA
TCGAGTTCGGTCCAGACGAGATTATGCAGCCACAGAGAATCTATTTTTTAGACGAGAACATGTATGAAAATGTCCCATCG
ATCGTGCCATTCGGTGGGTCAGACGACGAACTCTTGAAGGAGCTTTCTGTCCCTTTTGAGCAGCCGAAGCCTGTCGACTT
TTCCGTGCAAGTCATTAGTTGGTGTAGTTCTAAAGATGAGATTGTAATGGACTTCTTCGCCGGTTCCGGCACCACCGGCC
ACGCGGTCATGGCGCAGAACGCCGCCGACGGCGGCAATCGCCGCTACATCCTCGTCCAGCTTCCCGAACCGCTCGACCCG
GAGAACAAGGACCAGAAAGTCGCCGCCGAGTTCTGCGACAAGCTCGGCAAACCCCGCACCATCGCCGAGCTGACCAAGGA
ACGCCTGCGTCGCGCTGCGAAGAAAATCAAGGAAGAGAATCCGCTCTTCGCCGGTGATCTCGGCTTCCGTGTCTTCAAGC
TCGACTCCAGCAACATCCGCGCGTGGGAGCCGGACCGTGACAATCTGGACCAGACGCTGTTCGACCATGTGGAGCACCTG
AAGGAAGGTCGCACCGAGCAGGACATCCTTTACGAGCTGCTGCTCAAACTCGGCCTCGACCTGTGCGTGCCGATCGAGAC
CCGCACCATCGCCGGCAAGGCTGTGCACAGCATCGGTGGCGGCGTGCTGCTGGCCTGCCTCGCCACGCGGATCACTCGCG
AGGAGGTGGAGCCGCTGGCGCAGGGTATCGTCGCCTGGCATCAGGCCCTCGCCCCGGCCGGCGACACTACCTGCGTTTTC
CGAGACAGCGCCTTCGCCGACGACGTGGCCAAGACCAACCTCGCGGCCATCCTCGAGCAACACGGCATCGCCAACGTAAG
GAGTTTATGA

Upstream 100 bases:

>100_bases
AGCGGCAGGTGCCGCGGCAGGTGGAACTGAACCTGGAACTCAAGCGCGCCGAGGCCGCCCGCGCCGCCGCGCTCACACGA
CTATGAAGAACGAGGACAAC

Downstream 100 bases:

>100_bases
TGAATCAATTCTTTGAACCTCCGCGTGTAGAGGCTCTGCATGTGCAGAATTACCGCGCCCTGCAAAACGTGCGCCTGGAT
TCCATCACGCCGCTGACCGT

Product: type III restriction system methylase

Products: NA

Alternate protein names: M.EcoP15I; EcoP15I methyltransferase [H]

Number of amino acids: Translated: 669; Mature: 669

Protein sequence:

>669_residues
MKQLTANDPETRSHDLVAENIARLKALFPELVTEGPDGAAVNMDVLKQLVGDKTVTDCDEKYGLNWHGKRRARQLALTPS
TGTLRPCPEDSVDWDTTQNLMIEGDNLEVLKLLQKSYAGKIKLIYIDPPYNTGKDFVYPDDFKDNIRNYLELTGQVEGGR
KISSNTEASGRFHTDWLNMMYPRLKIARQLLSPTGVIAVHIDEHELEALVIVLRDLFGEENELGVTIWDKRNPKGDSRGI
AYQHESLVLFARDAEELFARSPVRRAKRNAERMLNAASRFVTECGSIAEARAAYRSWVKSQSTLSGGESMYDKLSETGRV
YRLVSMAWPNKKRAPADYFVPLKHPITGKDCPIPERGWRNPPATMKKLLEDGLIEFGPDEIMQPQRIYFLDENMYENVPS
IVPFGGSDDELLKELSVPFEQPKPVDFSVQVISWCSSKDEIVMDFFAGSGTTGHAVMAQNAADGGNRRYILVQLPEPLDP
ENKDQKVAAEFCDKLGKPRTIAELTKERLRRAAKKIKEENPLFAGDLGFRVFKLDSSNIRAWEPDRDNLDQTLFDHVEHL
KEGRTEQDILYELLLKLGLDLCVPIETRTIAGKAVHSIGGGVLLACLATRITREEVEPLAQGIVAWHQALAPAGDTTCVF
RDSAFADDVAKTNLAAILEQHGIANVRSL

Sequences:

>Translated_669_residues
MKQLTANDPETRSHDLVAENIARLKALFPELVTEGPDGAAVNMDVLKQLVGDKTVTDCDEKYGLNWHGKRRARQLALTPS
TGTLRPCPEDSVDWDTTQNLMIEGDNLEVLKLLQKSYAGKIKLIYIDPPYNTGKDFVYPDDFKDNIRNYLELTGQVEGGR
KISSNTEASGRFHTDWLNMMYPRLKIARQLLSPTGVIAVHIDEHELEALVIVLRDLFGEENELGVTIWDKRNPKGDSRGI
AYQHESLVLFARDAEELFARSPVRRAKRNAERMLNAASRFVTECGSIAEARAAYRSWVKSQSTLSGGESMYDKLSETGRV
YRLVSMAWPNKKRAPADYFVPLKHPITGKDCPIPERGWRNPPATMKKLLEDGLIEFGPDEIMQPQRIYFLDENMYENVPS
IVPFGGSDDELLKELSVPFEQPKPVDFSVQVISWCSSKDEIVMDFFAGSGTTGHAVMAQNAADGGNRRYILVQLPEPLDP
ENKDQKVAAEFCDKLGKPRTIAELTKERLRRAAKKIKEENPLFAGDLGFRVFKLDSSNIRAWEPDRDNLDQTLFDHVEHL
KEGRTEQDILYELLLKLGLDLCVPIETRTIAGKAVHSIGGGVLLACLATRITREEVEPLAQGIVAWHQALAPAGDTTCVF
RDSAFADDVAKTNLAAILEQHGIANVRSL
>Mature_669_residues
MKQLTANDPETRSHDLVAENIARLKALFPELVTEGPDGAAVNMDVLKQLVGDKTVTDCDEKYGLNWHGKRRARQLALTPS
TGTLRPCPEDSVDWDTTQNLMIEGDNLEVLKLLQKSYAGKIKLIYIDPPYNTGKDFVYPDDFKDNIRNYLELTGQVEGGR
KISSNTEASGRFHTDWLNMMYPRLKIARQLLSPTGVIAVHIDEHELEALVIVLRDLFGEENELGVTIWDKRNPKGDSRGI
AYQHESLVLFARDAEELFARSPVRRAKRNAERMLNAASRFVTECGSIAEARAAYRSWVKSQSTLSGGESMYDKLSETGRV
YRLVSMAWPNKKRAPADYFVPLKHPITGKDCPIPERGWRNPPATMKKLLEDGLIEFGPDEIMQPQRIYFLDENMYENVPS
IVPFGGSDDELLKELSVPFEQPKPVDFSVQVISWCSSKDEIVMDFFAGSGTTGHAVMAQNAADGGNRRYILVQLPEPLDP
ENKDQKVAAEFCDKLGKPRTIAELTKERLRRAAKKIKEENPLFAGDLGFRVFKLDSSNIRAWEPDRDNLDQTLFDHVEHL
KEGRTEQDILYELLLKLGLDLCVPIETRTIAGKAVHSIGGGVLLACLATRITREEVEPLAQGIVAWHQALAPAGDTTCVF
RDSAFADDVAKTNLAAILEQHGIANVRSL

Specific function: Binds the system-specific DNA recognition site 5'- CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's) [H]

COG id: COG2189

COG function: function code L; Adenine specific DNA methylase Mod

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002295
- InterPro:   IPR002941
- InterPro:   IPR002052 [H]

Pfam domain/function: PF01555 N6_N4_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 74930; Mature: 74930

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLTANDPETRSHDLVAENIARLKALFPELVTEGPDGAAVNMDVLKQLVGDKTVTDCDE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHCCCCCCCCHH
KYGLNWHGKRRARQLALTPSTGTLRPCPEDSVDWDTTQNLMIEGDNLEVLKLLQKSYAGK
HCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCC
IKLIYIDPPYNTGKDFVYPDDFKDNIRNYLELTGQVEGGRKISSNTEASGRFHTDWLNMM
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEHHHHHHH
YPRLKIARQLLSPTGVIAVHIDEHELEALVIVLRDLFGEENELGVTIWDKRNPKGDSRGI
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCE
AYQHESLVLFARDAEELFARSPVRRAKRNAERMLNAASRFVTECGSIAEARAAYRSWVKS
EEECCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSTLSGGESMYDKLSETGRVYRLVSMAWPNKKRAPADYFVPLKHPITGKDCPIPERGWRN
HHHCCCCHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
PPATMKKLLEDGLIEFGPDEIMQPQRIYFLDENMYENVPSIVPFGGSDDELLKELSVPFE
CCHHHHHHHHCCCCCCCHHHHCCCCEEEEECCHHHHCCCCEECCCCCHHHHHHHHCCCCC
QPKPVDFSVQVISWCSSKDEIVMDFFAGSGTTGHAVMAQNAADGGNRRYILVQLPEPLDP
CCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCC
ENKDQKVAAEFCDKLGKPRTIAELTKERLRRAAKKIKEENPLFAGDLGFRVFKLDSSNIR
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCE
AWEPDRDNLDQTLFDHVEHLKEGRTEQDILYELLLKLGLDLCVPIETRTIAGKAVHSIGG
ECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCH
GVLLACLATRITREEVEPLAQGIVAWHQALAPAGDTTCVFRDSAFADDVAKTNLAAILEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHH
HGIANVRSL
CCCCHHCCC
>Mature Secondary Structure
MKQLTANDPETRSHDLVAENIARLKALFPELVTEGPDGAAVNMDVLKQLVGDKTVTDCDE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHCCCCCCCCHH
KYGLNWHGKRRARQLALTPSTGTLRPCPEDSVDWDTTQNLMIEGDNLEVLKLLQKSYAGK
HCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCC
IKLIYIDPPYNTGKDFVYPDDFKDNIRNYLELTGQVEGGRKISSNTEASGRFHTDWLNMM
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEHHHHHHH
YPRLKIARQLLSPTGVIAVHIDEHELEALVIVLRDLFGEENELGVTIWDKRNPKGDSRGI
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCE
AYQHESLVLFARDAEELFARSPVRRAKRNAERMLNAASRFVTECGSIAEARAAYRSWVKS
EEECCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSTLSGGESMYDKLSETGRVYRLVSMAWPNKKRAPADYFVPLKHPITGKDCPIPERGWRN
HHHCCCCHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
PPATMKKLLEDGLIEFGPDEIMQPQRIYFLDENMYENVPSIVPFGGSDDELLKELSVPFE
CCHHHHHHHHCCCCCCCHHHHCCCCEEEEECCHHHHCCCCEECCCCCHHHHHHHHCCCCC
QPKPVDFSVQVISWCSSKDEIVMDFFAGSGTTGHAVMAQNAADGGNRRYILVQLPEPLDP
CCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCC
ENKDQKVAAEFCDKLGKPRTIAELTKERLRRAAKKIKEENPLFAGDLGFRVFKLDSSNIR
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCE
AWEPDRDNLDQTLFDHVEHLKEGRTEQDILYELLLKLGLDLCVPIETRTIAGKAVHSIGG
ECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCH
GVLLACLATRITREEVEPLAQGIVAWHQALAPAGDTTCVFRDSAFADDVAKTNLAAILEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHH
HGIANVRSL
CCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2837577 [H]