| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673733
Identifier: 21673733
GI number: 21673733
Start: 854373
End: 854894
Strand: Direct
Name: 21673733
Synonym: CT0905
Alternate gene names: NA
Gene position: 854373-854894 (Clockwise)
Preceding gene: 21673731
Following gene: 21673734
Centisome position: 39.65
GC content: 51.72
Gene sequence:
>522_bases TTGAAAAAACAAGTGCTCTTTATGCCAACGATAAGAGCACTGTCAAATAGCTATCGTTTCTTTTTTTCAGGCGACGCTTC TGATAAAGACATCGAGGCGCTGCTTTCCAGATTACGTGCATTCAAGGAAAAGGAGTTTGCCCTGAAAAACCAGATCGCCG AAAATCCGCTGGACAACCTGTTTCACGAAACCGGGCGGGCGTTCTCTGCTGACAAGATTTTCGACGAGGAAGAGCGCATC AACCTGAAACCGGCAACCGGCGAAGCCATCGTTAAAGAGCTGGAGAAATACAACCTTTCAGACACCAGTGAAGACCTGAA AGGTGTGGCTTTCGAGCCATTCCCTGGCCGAACCTTTCGGGGCGAGATTGGCCGGTTTTTTACCCCTCGCACCATTGTCA GGCACACCCAGGCTGGGCCGTGCGGCGAGCAGCGCAGAGGACACACAAGGAGATCGCCAGTTCATGGCCTCGCACAAAGA CTTCGTATTGATCTTGCTTCGACCGAGGTGTCAGCTCCATGA
Upstream 100 bases:
>100_bases TCTCCTGCGCGATCGCCCGGCACTTCTGCTGAGTCAAAGCATTGAAAACTTTCAGAAGGCGGGCAAGTCCCGCCTTCTTT AAGCTCATGCTCAACAGGAA
Downstream 100 bases:
>100_bases AGCTCGTCCGCAACACAGGTAGCGACCGCGTCGCCGATCTGATCCACCCGGCAGTCCTTGATGGCCGCCAGCTCGACGCG GTGACGCCGGGACTCTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Type I Site-Specific Deoxyribonuclease; N-6 DNA Methylase Family; Type I Restriction- System M Subunit; Type I Restriction- System M-Subunit-Like Protein
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKKQVLFMPTIRALSNSYRFFFSGDASDKDIEALLSRLRAFKEKEFALKNQIAENPLDNLFHETGRAFSADKIFDEEERI NLKPATGEAIVKELEKYNLSDTSEDLKGVAFEPFPGRTFRGEIGRFFTPRTIVRHTQAGPCGEQRRGHTRRSPVHGLAQR LRIDLASTEVSAP
Sequences:
>Translated_173_residues MKKQVLFMPTIRALSNSYRFFFSGDASDKDIEALLSRLRAFKEKEFALKNQIAENPLDNLFHETGRAFSADKIFDEEERI NLKPATGEAIVKELEKYNLSDTSEDLKGVAFEPFPGRTFRGEIGRFFTPRTIVRHTQAGPCGEQRRGHTRRSPVHGLAQR LRIDLASTEVSAP >Mature_173_residues MKKQVLFMPTIRALSNSYRFFFSGDASDKDIEALLSRLRAFKEKEFALKNQIAENPLDNLFHETGRAFSADKIFDEEERI NLKPATGEAIVKELEKYNLSDTSEDLKGVAFEPFPGRTFRGEIGRFFTPRTIVRHTQAGPCGEQRRGHTRRSPVHGLAQR LRIDLASTEVSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19658; Mature: 19658
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQVLFMPTIRALSNSYRFFFSGDASDKDIEALLSRLRAFKEKEFALKNQIAENPLDNL CCCCEEEHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH FHETGRAFSADKIFDEEERINLKPATGEAIVKELEKYNLSDTSEDLKGVAFEPFPGRTFR HHHHCCCCCHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC GEIGRFFTPRTIVRHTQAGPCGEQRRGHTRRSPVHGLAQRLRIDLASTEVSAP CCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKQVLFMPTIRALSNSYRFFFSGDASDKDIEALLSRLRAFKEKEFALKNQIAENPLDNL CCCCEEEHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH FHETGRAFSADKIFDEEERINLKPATGEAIVKELEKYNLSDTSEDLKGVAFEPFPGRTFR HHHHCCCCCHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC GEIGRFFTPRTIVRHTQAGPCGEQRRGHTRRSPVHGLAQRLRIDLASTEVSAP CCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA