Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673733

Identifier: 21673733

GI number: 21673733

Start: 854373

End: 854894

Strand: Direct

Name: 21673733

Synonym: CT0905

Alternate gene names: NA

Gene position: 854373-854894 (Clockwise)

Preceding gene: 21673731

Following gene: 21673734

Centisome position: 39.65

GC content: 51.72

Gene sequence:

>522_bases
TTGAAAAAACAAGTGCTCTTTATGCCAACGATAAGAGCACTGTCAAATAGCTATCGTTTCTTTTTTTCAGGCGACGCTTC
TGATAAAGACATCGAGGCGCTGCTTTCCAGATTACGTGCATTCAAGGAAAAGGAGTTTGCCCTGAAAAACCAGATCGCCG
AAAATCCGCTGGACAACCTGTTTCACGAAACCGGGCGGGCGTTCTCTGCTGACAAGATTTTCGACGAGGAAGAGCGCATC
AACCTGAAACCGGCAACCGGCGAAGCCATCGTTAAAGAGCTGGAGAAATACAACCTTTCAGACACCAGTGAAGACCTGAA
AGGTGTGGCTTTCGAGCCATTCCCTGGCCGAACCTTTCGGGGCGAGATTGGCCGGTTTTTTACCCCTCGCACCATTGTCA
GGCACACCCAGGCTGGGCCGTGCGGCGAGCAGCGCAGAGGACACACAAGGAGATCGCCAGTTCATGGCCTCGCACAAAGA
CTTCGTATTGATCTTGCTTCGACCGAGGTGTCAGCTCCATGA

Upstream 100 bases:

>100_bases
TCTCCTGCGCGATCGCCCGGCACTTCTGCTGAGTCAAAGCATTGAAAACTTTCAGAAGGCGGGCAAGTCCCGCCTTCTTT
AAGCTCATGCTCAACAGGAA

Downstream 100 bases:

>100_bases
AGCTCGTCCGCAACACAGGTAGCGACCGCGTCGCCGATCTGATCCACCCGGCAGTCCTTGATGGCCGCCAGCTCGACGCG
GTGACGCCGGGACTCTCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Type I Site-Specific Deoxyribonuclease; N-6 DNA Methylase Family; Type I Restriction- System M Subunit; Type I Restriction- System M-Subunit-Like Protein

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKKQVLFMPTIRALSNSYRFFFSGDASDKDIEALLSRLRAFKEKEFALKNQIAENPLDNLFHETGRAFSADKIFDEEERI
NLKPATGEAIVKELEKYNLSDTSEDLKGVAFEPFPGRTFRGEIGRFFTPRTIVRHTQAGPCGEQRRGHTRRSPVHGLAQR
LRIDLASTEVSAP

Sequences:

>Translated_173_residues
MKKQVLFMPTIRALSNSYRFFFSGDASDKDIEALLSRLRAFKEKEFALKNQIAENPLDNLFHETGRAFSADKIFDEEERI
NLKPATGEAIVKELEKYNLSDTSEDLKGVAFEPFPGRTFRGEIGRFFTPRTIVRHTQAGPCGEQRRGHTRRSPVHGLAQR
LRIDLASTEVSAP
>Mature_173_residues
MKKQVLFMPTIRALSNSYRFFFSGDASDKDIEALLSRLRAFKEKEFALKNQIAENPLDNLFHETGRAFSADKIFDEEERI
NLKPATGEAIVKELEKYNLSDTSEDLKGVAFEPFPGRTFRGEIGRFFTPRTIVRHTQAGPCGEQRRGHTRRSPVHGLAQR
LRIDLASTEVSAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19658; Mature: 19658

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQVLFMPTIRALSNSYRFFFSGDASDKDIEALLSRLRAFKEKEFALKNQIAENPLDNL
CCCCEEEHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FHETGRAFSADKIFDEEERINLKPATGEAIVKELEKYNLSDTSEDLKGVAFEPFPGRTFR
HHHHCCCCCHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
GEIGRFFTPRTIVRHTQAGPCGEQRRGHTRRSPVHGLAQRLRIDLASTEVSAP
CCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKQVLFMPTIRALSNSYRFFFSGDASDKDIEALLSRLRAFKEKEFALKNQIAENPLDNL
CCCCEEEHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FHETGRAFSADKIFDEEERINLKPATGEAIVKELEKYNLSDTSEDLKGVAFEPFPGRTFR
HHHHCCCCCHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
GEIGRFFTPRTIVRHTQAGPCGEQRRGHTRRSPVHGLAQRLRIDLASTEVSAP
CCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA