| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673702
Identifier: 21673702
GI number: 21673702
Start: 830193
End: 830672
Strand: Reverse
Name: 21673702
Synonym: CT0874
Alternate gene names: NA
Gene position: 830672-830193 (Counterclockwise)
Preceding gene: 21673705
Following gene: 21673698
Centisome position: 38.55
GC content: 52.29
Gene sequence:
>480_bases TTGGATATGCTCAATTCGTTCGATGTCACCAACGCCTGCAACAGCTTTCTGCAGGCGATGAACGTGGCCAACAGCATAAT TATCACCGGCGCAGTGAAGAATGTGCTAAGCTGCAGCGGCGAAATCGGCAGTTATGTCGCCAACCGCCAGATCAATTCAC TTGATGAGCTTGATGTGAAAATGGGCGGTTTGACGCTGGGTGATGCTGGCCCGGCAATGATTCTTTCAGCATCAGATGGC AACATTGGAATACTGGAAATCAACCTGATGAATCTTGGCGAACACTGGGAGCAGTGCCATGCGCCGGAAAAAACGGCATG GGGGCCAAGCGGCGGAGAAGACCTCGGCTTCCTCCTCGAACGCACGATAAGCCTCAAAGAAGCGCCTTCGGTCATGGCAA CAGTACTCGCCGGAACAGGCTTCCGTCAAGTCAGCGAGTTCAGTAACACGTTAAGCCTCTTCATCCTACAGGACGTATAA
Upstream 100 bases:
>100_bases ACCTCACGCTGGCAGACATCGACACGCTGATTTTTTCGAGCACCGATATGGACATGCTCTCGAACCGGCGACGGCCAACA TTGTCCAGCAGAAACTTGGG
Downstream 100 bases:
>100_bases GTTCTATGAGACCTATACGTCCTATTCTTTCTTTCTAACCAACCCACCAACCCAATGTCAAACGAACACGAACTTCGCGC TTTCGGCAAACTGATTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase; Beta-Ketoacyl-Acyl-Carrier-Protein Synthase I
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MDMLNSFDVTNACNSFLQAMNVANSIIITGAVKNVLSCSGEIGSYVANRQINSLDELDVKMGGLTLGDAGPAMILSASDG NIGILEINLMNLGEHWEQCHAPEKTAWGPSGGEDLGFLLERTISLKEAPSVMATVLAGTGFRQVSEFSNTLSLFILQDV
Sequences:
>Translated_159_residues MDMLNSFDVTNACNSFLQAMNVANSIIITGAVKNVLSCSGEIGSYVANRQINSLDELDVKMGGLTLGDAGPAMILSASDG NIGILEINLMNLGEHWEQCHAPEKTAWGPSGGEDLGFLLERTISLKEAPSVMATVLAGTGFRQVSEFSNTLSLFILQDV >Mature_159_residues MDMLNSFDVTNACNSFLQAMNVANSIIITGAVKNVLSCSGEIGSYVANRQINSLDELDVKMGGLTLGDAGPAMILSASDG NIGILEINLMNLGEHWEQCHAPEKTAWGPSGGEDLGFLLERTISLKEAPSVMATVLAGTGFRQVSEFSNTLSLFILQDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16868; Mature: 16868
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMLNSFDVTNACNSFLQAMNVANSIIITGAVKNVLSCSGEIGSYVANRQINSLDELDVK CCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHE MGGLTLGDAGPAMILSASDGNIGILEINLMNLGEHWEQCHAPEKTAWGPSGGEDLGFLLE ECCEEECCCCCEEEEEECCCCEEEEEEEEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHH RTISLKEAPSVMATVLAGTGFRQVSEFSNTLSLFILQDV HHHCHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEECC >Mature Secondary Structure MDMLNSFDVTNACNSFLQAMNVANSIIITGAVKNVLSCSGEIGSYVANRQINSLDELDVK CCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHE MGGLTLGDAGPAMILSASDGNIGILEINLMNLGEHWEQCHAPEKTAWGPSGGEDLGFLLE ECCEEECCCCCEEEEEECCCCEEEEEEEEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHH RTISLKEAPSVMATVLAGTGFRQVSEFSNTLSLFILQDV HHHCHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA