Click here to switch to the map view.

The map label for this gene is yrkE [H]

Identifier: 21673690

GI number: 21673690

Start: 818417

End: 818926

Strand: Direct

Name: yrkE [H]

Synonym: CT0861

Alternate gene names: 21673690

Gene position: 818417-818926 (Clockwise)

Preceding gene: 21673689

Following gene: 21673691

Centisome position: 37.98

GC content: 53.73

Gene sequence:

>510_bases
ATGTCTGATACCAAAAAACTCGCGATTATTGCGTCCAAGGGAACCCTTGACTGGGCCTATCCTCCCTTCATTCTTGCTTC
AAGCGCCGCGGCGATGGATATGGAAGCCGTGGTGTTTTTCACCTTCTACGGTCTTCCGCTGCTAAAAAAAGAGATCGACG
CCAAGGTGACGCCGGTTGGCAATCCCGCCATGCCGATGCACATGCCCTTCGGCAGCAAGGAGTTCCAGTCGATCAACTGG
CCGATTCCCAATTTCATTTCGGGCAACATTCCCGGATTCGACACGATGGCGACCATGCTGATGAAGGAGACCTTCAAAAA
GAAGGGGGTTGCTACCGTTGAGCAGCTTCGCGAGATATGCCTTGAGTCGGGCGTCAGGTTTATTGCCTGCCAGATGACCA
TGGAGGTGTTTGGCTTCGACAAGTCGGAATTCATCGAAGGCGTCGATTATGGCGGCGCAGCCTCGTTCCTGGAGTATGCG
GCGGAGGCCAACATCTCGCTCTTTATCTGA

Upstream 100 bases:

>100_bases
GGCCAGTGGCAAGCTGACCTCCGGTCACTGACAGGCGACAGGGCTGCGGCTGGTATGGGTAAAAATTCTCAAAAACGATA
AACCAGAAAATTCATCACCT

Downstream 100 bases:

>100_bases
CCAGAAAAAAGTTCCTGGAATAAGCGGTAACGCTTTCGGTTCTCGAAATTATTTTGCATAATTACATACTCATTTATCGG
AAGACTGTCTCTCCCGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSDTKKLAIIASKGTLDWAYPPFILASSAAAMDMEAVVFFTFYGLPLLKKEIDAKVTPVGNPAMPMHMPFGSKEFQSINW
PIPNFISGNIPGFDTMATMLMKETFKKKGVATVEQLREICLESGVRFIACQMTMEVFGFDKSEFIEGVDYGGAASFLEYA
AEANISLFI

Sequences:

>Translated_169_residues
MSDTKKLAIIASKGTLDWAYPPFILASSAAAMDMEAVVFFTFYGLPLLKKEIDAKVTPVGNPAMPMHMPFGSKEFQSINW
PIPNFISGNIPGFDTMATMLMKETFKKKGVATVEQLREICLESGVRFIACQMTMEVFGFDKSEFIEGVDYGGAASFLEYA
AEANISLFI
>Mature_168_residues
SDTKKLAIIASKGTLDWAYPPFILASSAAAMDMEAVVFFTFYGLPLLKKEIDAKVTPVGNPAMPMHMPFGSKEFQSINWP
IPNFISGNIPGFDTMATMLMKETFKKKGVATVEQLREICLESGVRFIACQMTMEVFGFDKSEFIEGVDYGGAASFLEYAA
EANISLFI

Specific function: Unknown

COG id: COG2210

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003787 [H]

Pfam domain/function: PF02635 DrsE [H]

EC number: NA

Molecular weight: Translated: 18609; Mature: 18478

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTKKLAIIASKGTLDWAYPPFILASSAAAMDMEAVVFFTFYGLPLLKKEIDAKVTPVG
CCCCCEEEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCEECCCC
NPAMPMHMPFGSKEFQSINWPIPNFISGNIPGFDTMATMLMKETFKKKGVATVEQLREIC
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LESGVRFIACQMTMEVFGFDKSEFIEGVDYGGAASFLEYAAEANISLFI
HHCCCCEEHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCCEEEEC
>Mature Secondary Structure 
SDTKKLAIIASKGTLDWAYPPFILASSAAAMDMEAVVFFTFYGLPLLKKEIDAKVTPVG
CCCCEEEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCEECCCC
NPAMPMHMPFGSKEFQSINWPIPNFISGNIPGFDTMATMLMKETFKKKGVATVEQLREIC
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LESGVRFIACQMTMEVFGFDKSEFIEGVDYGGAASFLEYAAEANISLFI
HHCCCCEEHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]