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The map label for this gene is nfeD [H]

Identifier: 21673625

GI number: 21673625

Start: 760953

End: 762266

Strand: Direct

Name: nfeD [H]

Synonym: CT0795

Alternate gene names: 21673625

Gene position: 760953-762266 (Clockwise)

Preceding gene: 21673624

Following gene: 21673626

Centisome position: 35.31

GC content: 59.97

Gene sequence:

>1314_bases
ATGGTAAAAAGGCTTTTGAAATTCTGCGTTATCCCGGCGATCGCTGTGTTCTTGCTTGTCGCCATGCCGGTAGCTGGCCA
GGCAGCGCAGATTCGCGCCATGTCGTTGACGGGGAGCGTCAATGCGGGCAGCGCGGCATATTTTCTCCGGGTGCTTGATG
AGGCGAACCGGGATAACGACACGTTGCTGCTCGTGGAGCTCGATACGCCGGGCGGGCTTGTTTCGTCTCTCCGGCAGATG
GTGCAGGGAGTGATGGCGTCGCGCGTGCCGGTGGTGGTCTATGTCGCGCCGTCCGGAGCGCAGGCGGCTTCGGCGGGGGC
GCTGCTGCTGCTCTCCGCCAATGTGGCGGCGATGGCTCCGGGCACCGAAACCGGCGCGGCCCATCCGGTCGATATAAGCG
GCGGCGGCGAGAAGGGGAGCGTGATGGGCAAGAAAATCGAGAACGATCTTGCAGCCTTTGCCCGCAGTCTTGCGCAAAAG
CGTGGCCGCAGTCCCGAATGGGCTGAGCGGGCCGTGCGGGAGAGCATCGCATCGACGGCATCTGAAGCGCTCGCGGCGGG
CGTGATCGATACCGTGGCGGACAATCGCAAGGAGCTGCTCGTGTCCATCGATGGCCGCAAAGTCGAGACAGCTATCGGTG
AATTGATCATTCGCACAACCAATGTGCCAGTTAAGGAAGCGTCCCCAACTTTCGGCGAAGAGGTGATGATGGCTATCGCC
GATCCAAACATCGCTTATTTTCTGCTACTGCTCGGCCTGGCCGGTCTCTGGTTCGAGCTTTCGACACCGGGTGCGGTGCT
GCCGGGCGTGGCCGGAGCGATTGCTCTTGTGCTCGGCGCGTGGGCCATGCAGCTCCTGCCGGTCAACGTCACCGGCCTCC
TGCTCATTCTGCTCGCCATCCTTTTTTTCGGGCTGGAAATCTTCGTGGTCAGCAGCGGAGCGCTTGCGATCGCCGGTCTG
GTCGCGCTTTTCATCGGTTCGGTCATGGTGTTCAATCAGCCGGAGTTAGGCCTCGTCATCAACTGGTGGGTTTTTCTTCC
GCTTTTTCTTTCATTTTCGGCGGGAGTCCTGTTACTTGTCTTTGTGGTGTTTCGTTCTACCAGACGCAAGGCGATCTCCG
GCAGGGAGGGGCTGGTCGGTGAAACAGGTACCGTTGAACGAGCCATCGGAGAGGGCAAGGACGGCAAGGTGTTTGTGCAT
GGCGAACTTTGGGACGCATCGGCAAACGGTTTGATTCCTGCCGGATCACAGGTAACGGTCACAGGGATCGAGGGGATGAG
GCTCATGGTGAAACAAAATAGCAAGGAGGAGTGA

Upstream 100 bases:

>100_bases
AAACGGTAACGTTGCTTGAGAGGAACTATCTCATTTTTTTTGTTATTGTTATCATTGTTGGTGAATCAGGGAATCCACTC
GTTTCAGAATGGTTCGGGCA

Downstream 100 bases:

>100_bases
TATGCTTTTCATGAATATTCTGGTTTTACTGGCGCTGGCGGTGGCGTTTTTCGTTTCCGCGGTCAAGATTCTGCCCGAGT
ATGAGCGGGCAGTCATATTC

Product: NfeD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MVKRLLKFCVIPAIAVFLLVAMPVAGQAAQIRAMSLTGSVNAGSAAYFLRVLDEANRDNDTLLLVELDTPGGLVSSLRQM
VQGVMASRVPVVVYVAPSGAQAASAGALLLLSANVAAMAPGTETGAAHPVDISGGGEKGSVMGKKIENDLAAFARSLAQK
RGRSPEWAERAVRESIASTASEALAAGVIDTVADNRKELLVSIDGRKVETAIGELIIRTTNVPVKEASPTFGEEVMMAIA
DPNIAYFLLLLGLAGLWFELSTPGAVLPGVAGAIALVLGAWAMQLLPVNVTGLLLILLAILFFGLEIFVVSSGALAIAGL
VALFIGSVMVFNQPELGLVINWWVFLPLFLSFSAGVLLLVFVVFRSTRRKAISGREGLVGETGTVERAIGEGKDGKVFVH
GELWDASANGLIPAGSQVTVTGIEGMRLMVKQNSKEE

Sequences:

>Translated_437_residues
MVKRLLKFCVIPAIAVFLLVAMPVAGQAAQIRAMSLTGSVNAGSAAYFLRVLDEANRDNDTLLLVELDTPGGLVSSLRQM
VQGVMASRVPVVVYVAPSGAQAASAGALLLLSANVAAMAPGTETGAAHPVDISGGGEKGSVMGKKIENDLAAFARSLAQK
RGRSPEWAERAVRESIASTASEALAAGVIDTVADNRKELLVSIDGRKVETAIGELIIRTTNVPVKEASPTFGEEVMMAIA
DPNIAYFLLLLGLAGLWFELSTPGAVLPGVAGAIALVLGAWAMQLLPVNVTGLLLILLAILFFGLEIFVVSSGALAIAGL
VALFIGSVMVFNQPELGLVINWWVFLPLFLSFSAGVLLLVFVVFRSTRRKAISGREGLVGETGTVERAIGEGKDGKVFVH
GELWDASANGLIPAGSQVTVTGIEGMRLMVKQNSKEE
>Mature_437_residues
MVKRLLKFCVIPAIAVFLLVAMPVAGQAAQIRAMSLTGSVNAGSAAYFLRVLDEANRDNDTLLLVELDTPGGLVSSLRQM
VQGVMASRVPVVVYVAPSGAQAASAGALLLLSANVAAMAPGTETGAAHPVDISGGGEKGSVMGKKIENDLAAFARSLAQK
RGRSPEWAERAVRESIASTASEALAAGVIDTVADNRKELLVSIDGRKVETAIGELIIRTTNVPVKEASPTFGEEVMMAIA
DPNIAYFLLLLGLAGLWFELSTPGAVLPGVAGAIALVLGAWAMQLLPVNVTGLLLILLAILFFGLEIFVVSSGALAIAGL
VALFIGSVMVFNQPELGLVINWWVFLPLFLSFSAGVLLLVFVVFRSTRRKAISGREGLVGETGTVERAIGEGKDGKVFVH
GELWDASANGLIPAGSQVTVTGIEGMRLMVKQNSKEE

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 45658; Mature: 45658

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRLLKFCVIPAIAVFLLVAMPVAGQAAQIRAMSLTGSVNAGSAAYFLRVLDEANRDND
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCC
TLLLVELDTPGGLVSSLRQMVQGVMASRVPVVVYVAPSGAQAASAGALLLLSANVAAMAP
EEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEECC
GTETGAAHPVDISGGGEKGSVMGKKIENDLAAFARSLAQKRGRSPEWAERAVRESIASTA
CCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SEALAAGVIDTVADNRKELLVSIDGRKVETAIGELIIRTTNVPVKEASPTFGEEVMMAIA
HHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHCC
DPNIAYFLLLLGLAGLWFELSTPGAVLPGVAGAIALVLGAWAMQLLPVNVTGLLLILLAI
CCCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LFFGLEIFVVSSGALAIAGLVALFIGSVMVFNQPELGLVINWWVFLPLFLSFSAGVLLLV
HHHHHHHEEECCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FVVFRSTRRKAISGREGLVGETGTVERAIGEGKDGKVFVHGELWDASANGLIPAGSQVTV
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCEEEE
TGIEGMRLMVKQNSKEE
ECCCCEEEEEECCCCCC
>Mature Secondary Structure
MVKRLLKFCVIPAIAVFLLVAMPVAGQAAQIRAMSLTGSVNAGSAAYFLRVLDEANRDND
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCC
TLLLVELDTPGGLVSSLRQMVQGVMASRVPVVVYVAPSGAQAASAGALLLLSANVAAMAP
EEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEECC
GTETGAAHPVDISGGGEKGSVMGKKIENDLAAFARSLAQKRGRSPEWAERAVRESIASTA
CCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SEALAAGVIDTVADNRKELLVSIDGRKVETAIGELIIRTTNVPVKEASPTFGEEVMMAIA
HHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHCC
DPNIAYFLLLLGLAGLWFELSTPGAVLPGVAGAIALVLGAWAMQLLPVNVTGLLLILLAI
CCCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LFFGLEIFVVSSGALAIAGLVALFIGSVMVFNQPELGLVINWWVFLPLFLSFSAGVLLLV
HHHHHHHEEECCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FVVFRSTRRKAISGREGLVGETGTVERAIGEGKDGKVFVHGELWDASANGLIPAGSQVTV
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCEEEE
TGIEGMRLMVKQNSKEE
ECCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]