| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673303
Identifier: 21673303
GI number: 21673303
Start: 484486
End: 485766
Strand: Direct
Name: 21673303
Synonym: CT0467
Alternate gene names: NA
Gene position: 484486-485766 (Clockwise)
Preceding gene: 21673302
Following gene: 21673304
Centisome position: 22.48
GC content: 56.99
Gene sequence:
>1281_bases ATGGAGCACAGCCGTGAAACGATTGCGATGCTTATCGATGCCGACAATTCGCCGAGCGACAAGATCGATTTCATCCTGGC CGAAATGGCCAAATATGGCGTGGTCAACATCCGCAGGGCCTACGGCAACTGGAAGAGCCACTCGCTGAAAGGGTGGGAGG ACAAGCTGCATGATTACGCCATCCGTCCGATCCAGCAGTTCGATTACACCAAAGGCAAGAACGCGACCGACATGGCGATG ACCATCGACGGCATGGATCTGCTCTTCAGCAAAAAGCTCGACGCCTTCTGCATTGTGTCGAGTGACAGCGATTTTACGCC GCTCGTGATGCGTATTCTGTCGGAAGGGTTGAACGTTTACGGATTTGGCCAGAAATCGACCCCGTTGCCATTCGTGAATG CCTGTTCCACCTTTCTTTATCTCGATTCGTTTGCCGGTGAGAAGGAGCAGACCAAGAGCGACAGCTGCCGGCGCAAGAGC AGCCACGAGCTGAGGAGCGATGGCAAGCTTCGGACGCTGCTTCTCAACGCTGTTGACAGCGCGCAGGAGGAGGATGGCTG GTCGAACCTTGCCAAGATCGGCAAGAACATCGCCAACCAGGCGTCGTTCGATCCGAGGAACTACGGCTTTAAGCGCCTGT CTGATCTGGTTCGTGCTATTGATATGTTTGATATCGAGTTCCGGAACAACAACTCCGAACTCTACATTCGCGACAAACGC AAGGGACGCAAGTACGAAACCCTGCCCGTCGATGCTCCGGCGACGGCTCCTGTTTCGGTTGTGCCCGAACCGGTAGCAGT AAAGCCGGTCGAACCGCAAGCGGAAGAGTCGCAACAGCCTGCGTCAGAACCTGCACTGAAGAGCACTTCCGAGCCGCAAG TGGTGCAGCTTTCTTCACCCGGACCTGAATCGGTTGCGCCTGAAGTGCCTGCATTGAAGCCTGTCGAACCGGAAACCCCC ATGCCTGTGACTGAGACGGCGGAGTCTGCTGCCGAGTTGCCAGTTTCGACCGAAGCCAAGCCGAAGAGAACGGCGAGGTC AAGGATAACCAAGCCGCGCTCGACCTCCTCGAGAAAAACAAAAGTTGCCGCAGAGCCGACGAGCGAAACCGCAAAGTCAA CGGGAGACTCCGCCGTTGTGGCACCTGCGCCGGCGAAAACTGAAGTTGTTCAGGCGACGGTGGAAACTCCGGAGCCGGAG AAGAAAACCCGGCGTCCCGCTCGACGCCGCACGACTCGTAAAAAGAGCGAGGGGGAGAGTGACGCTGTACCGGCAGAGTA G
Upstream 100 bases:
>100_bases ATTGTCCGCTTCTCCAGTGTATGAGGAGATGCCGGTTTTTCAACTACTTCTTTCCGTTTCCTGACGAGGAGCGGGCAAGA CCAACGACAAGGACACCACT
Downstream 100 bases:
>100_bases TCGTCGCTTTCCGTGATTCCCGGAATGGGACGGATGGGACTTCTGAAATGGCAGAGATGAAGACGATTCTACAGGTTTTT TAGTTGTCAGGGCGGTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MEHSRETIAMLIDADNSPSDKIDFILAEMAKYGVVNIRRAYGNWKSHSLKGWEDKLHDYAIRPIQQFDYTKGKNATDMAM TIDGMDLLFSKKLDAFCIVSSDSDFTPLVMRILSEGLNVYGFGQKSTPLPFVNACSTFLYLDSFAGEKEQTKSDSCRRKS SHELRSDGKLRTLLLNAVDSAQEEDGWSNLAKIGKNIANQASFDPRNYGFKRLSDLVRAIDMFDIEFRNNNSELYIRDKR KGRKYETLPVDAPATAPVSVVPEPVAVKPVEPQAEESQQPASEPALKSTSEPQVVQLSSPGPESVAPEVPALKPVEPETP MPVTETAESAAELPVSTEAKPKRTARSRITKPRSTSSRKTKVAAEPTSETAKSTGDSAVVAPAPAKTEVVQATVETPEPE KKTRRPARRRTTRKKSEGESDAVPAE
Sequences:
>Translated_426_residues MEHSRETIAMLIDADNSPSDKIDFILAEMAKYGVVNIRRAYGNWKSHSLKGWEDKLHDYAIRPIQQFDYTKGKNATDMAM TIDGMDLLFSKKLDAFCIVSSDSDFTPLVMRILSEGLNVYGFGQKSTPLPFVNACSTFLYLDSFAGEKEQTKSDSCRRKS SHELRSDGKLRTLLLNAVDSAQEEDGWSNLAKIGKNIANQASFDPRNYGFKRLSDLVRAIDMFDIEFRNNNSELYIRDKR KGRKYETLPVDAPATAPVSVVPEPVAVKPVEPQAEESQQPASEPALKSTSEPQVVQLSSPGPESVAPEVPALKPVEPETP MPVTETAESAAELPVSTEAKPKRTARSRITKPRSTSSRKTKVAAEPTSETAKSTGDSAVVAPAPAKTEVVQATVETPEPE KKTRRPARRRTTRKKSEGESDAVPAE >Mature_426_residues MEHSRETIAMLIDADNSPSDKIDFILAEMAKYGVVNIRRAYGNWKSHSLKGWEDKLHDYAIRPIQQFDYTKGKNATDMAM TIDGMDLLFSKKLDAFCIVSSDSDFTPLVMRILSEGLNVYGFGQKSTPLPFVNACSTFLYLDSFAGEKEQTKSDSCRRKS SHELRSDGKLRTLLLNAVDSAQEEDGWSNLAKIGKNIANQASFDPRNYGFKRLSDLVRAIDMFDIEFRNNNSELYIRDKR KGRKYETLPVDAPATAPVSVVPEPVAVKPVEPQAEESQQPASEPALKSTSEPQVVQLSSPGPESVAPEVPALKPVEPETP MPVTETAESAAELPVSTEAKPKRTARSRITKPRSTSSRKTKVAAEPTSETAKSTGDSAVVAPAPAKTEVVQATVETPEPE KKTRRPARRRTTRKKSEGESDAVPAE
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46935; Mature: 46935
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHSRETIAMLIDADNSPSDKIDFILAEMAKYGVVNIRRAYGNWKSHSLKGWEDKLHDYA CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCHHHHHHHHH IRPIQQFDYTKGKNATDMAMTIDGMDLLFSKKLDAFCIVSSDSDFTPLVMRILSEGLNVY HCHHHHHCCCCCCCCCCEEEEECCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCEE GFGQKSTPLPFVNACSTFLYLDSFAGEKEQTKSDSCRRKSSHELRSDGKLRTLLLNAVDS ECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AQEEDGWSNLAKIGKNIANQASFDPRNYGFKRLSDLVRAIDMFDIEFRNNNSELYIRDKR HHHHCCHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHEEEEEECCCCEEEEEECC KGRKYETLPVDAPATAPVSVVPEPVAVKPVEPQAEESQQPASEPALKSTSEPQVVQLSSP CCCEECCCCCCCCCCCCCEECCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCC GPESVAPEVPALKPVEPETPMPVTETAESAAELPVSTEAKPKRTARSRITKPRSTSSRKT CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCE KVAAEPTSETAKSTGDSAVVAPAPAKTEVVQATVETPEPEKKTRRPARRRTTRKKSEGES EEECCCCHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCHHHHCCHHHHHHHHHHCCCCC DAVPAE CCCCCC >Mature Secondary Structure MEHSRETIAMLIDADNSPSDKIDFILAEMAKYGVVNIRRAYGNWKSHSLKGWEDKLHDYA CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCHHHHHHHHH IRPIQQFDYTKGKNATDMAMTIDGMDLLFSKKLDAFCIVSSDSDFTPLVMRILSEGLNVY HCHHHHHCCCCCCCCCCEEEEECCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCEE GFGQKSTPLPFVNACSTFLYLDSFAGEKEQTKSDSCRRKSSHELRSDGKLRTLLLNAVDS ECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AQEEDGWSNLAKIGKNIANQASFDPRNYGFKRLSDLVRAIDMFDIEFRNNNSELYIRDKR HHHHCCHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHEEEEEECCCCEEEEEECC KGRKYETLPVDAPATAPVSVVPEPVAVKPVEPQAEESQQPASEPALKSTSEPQVVQLSSP CCCEECCCCCCCCCCCCCEECCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCC GPESVAPEVPALKPVEPETPMPVTETAESAAELPVSTEAKPKRTARSRITKPRSTSSRKT CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCE KVAAEPTSETAKSTGDSAVVAPAPAKTEVVQATVETPEPEKKTRRPARRRTTRKKSEGES EEECCCCHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCHHHHCCHHHHHHHHHHCCCCC DAVPAE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA