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The map label for this gene is ycfF [C]

Identifier: 21672899

GI number: 21672899

Start: 59511

End: 59897

Strand: Reverse

Name: ycfF [C]

Synonym: CT0058

Alternate gene names: 21672899

Gene position: 59897-59511 (Counterclockwise)

Preceding gene: 21672900

Following gene: 21672898

Centisome position: 2.78

GC content: 58.4

Gene sequence:

>387_bases
ATGACACGTTACGATCCAGACTGCATTTTCTGCAAGATTGCCACCGGGCACATTCCGGCCAATCTGGTTTACAAAAATGA
CCACGTGGCCGCATTTCACGACATCAACCCGGTCGCGCCCATCCATGTGCTCATCATTCCGCTGGAGCACATCCGGTCGC
TCAGCGATCTGAAGGATGGCGATTCGGAGATCGCCGCGCAGATTCTGCTTGCCGCACGCATCGTGGCCGAGAAGACCGGA
GTGCTCGAATCGGGCTACCGGCTGGTGTTCAACAATGGCGAAGACGCCCTGCAAAGCGTCGGACACATCCATGCGCATCT
GATCGGCGGCAAAACGATGGGCTGGCCTCCCTTTGCGGGCCGGGAAGTGGCTCACGGGCAGGATTAA

Upstream 100 bases:

>100_bases
TCAAAGGGGCGATCACGGTGGTGCTTATCGGTTCGGGTGGCAGCATGAGCCTGTCTATCATCCAGAAACAATAGTTCAGC
ATTCATAAATCGACAACACC

Downstream 100 bases:

>100_bases
TCGCAGAACCTGTTTTTTTTTCAGAAATTTTGCCCCGCCATCAATACGGGAAAACTTTTCGTCTGTCCGGACCGTTATTT
ACACTAATTTTACTTAAGAC

Product: Hit family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MTRYDPDCIFCKIATGHIPANLVYKNDHVAAFHDINPVAPIHVLIIPLEHIRSLSDLKDGDSEIAAQILLAARIVAEKTG
VLESGYRLVFNNGEDALQSVGHIHAHLIGGKTMGWPPFAGREVAHGQD

Sequences:

>Translated_128_residues
MTRYDPDCIFCKIATGHIPANLVYKNDHVAAFHDINPVAPIHVLIIPLEHIRSLSDLKDGDSEIAAQILLAARIVAEKTG
VLESGYRLVFNNGEDALQSVGHIHAHLIGGKTMGWPPFAGREVAHGQD
>Mature_127_residues
TRYDPDCIFCKIATGHIPANLVYKNDHVAAFHDINPVAPIHVLIIPLEHIRSLSDLKDGDSEIAAQILLAARIVAEKTGV
LESGYRLVFNNGEDALQSVGHIHAHLIGGKTMGWPPFAGREVAHGQD

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=117, Percent_Identity=41.8803418803419, Blast_Score=103, Evalue=4e-23,
Organism=Homo sapiens, GI14211923, Length=110, Percent_Identity=38.1818181818182, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1787346, Length=108, Percent_Identity=40.7407407407407, Blast_Score=82, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17506713, Length=111, Percent_Identity=42.3423423423423, Blast_Score=107, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6320078, Length=118, Percent_Identity=36.4406779661017, Blast_Score=65, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28574010, Length=111, Percent_Identity=45.045045045045, Blast_Score=106, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24581222, Length=111, Percent_Identity=45.045045045045, Blast_Score=106, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 13923; Mature: 13792

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYDPDCIFCKIATGHIPANLVYKNDHVAAFHDINPVAPIHVLIIPLEHIRSLSDLKDG
CCCCCCCEEEEEEECCCCCCEEEEECCCEEEEECCCCCCCEEEEEEEHHHHHHHHHCCCC
DSEIAAQILLAARIVAEKTGVLESGYRLVFNNGEDALQSVGHIHAHLIGGKTMGWPPFAG
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHEEEEECCCCCCCCCCCC
REVAHGQD
CCCCCCCC
>Mature Secondary Structure 
TRYDPDCIFCKIATGHIPANLVYKNDHVAAFHDINPVAPIHVLIIPLEHIRSLSDLKDG
CCCCCCEEEEEEECCCCCCEEEEECCCEEEEECCCCCCCEEEEEEEHHHHHHHHHCCCC
DSEIAAQILLAARIVAEKTGVLESGYRLVFNNGEDALQSVGHIHAHLIGGKTMGWPPFAG
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHEEEEECCCCCCCCCCCC
REVAHGQD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]