| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21672891
Identifier: 21672891
GI number: 21672891
Start: 48215
End: 48877
Strand: Reverse
Name: 21672891
Synonym: CT0050
Alternate gene names: NA
Gene position: 48877-48215 (Counterclockwise)
Preceding gene: 21672892
Following gene: 21672890
Centisome position: 2.27
GC content: 64.4
Gene sequence:
>663_bases GTGCGCAAGGGCAACACGGATTTGCTGCTCTTTTTCAACGGCTGGGGGATGGATCGCCGCGTGGCCGACTGGCTCGTTTC GGCGTGGCCTGACTCGGCGGGACGCGACATCGCCGTGCTGTACGATTATCGCAACCTGTCGATTCCCGCGTGGCTCGGCG AGGTGATGGCCGAGGCCCGCGCGGTCGATCTCGTCGCCTGGTCGCTCGGCGTGTGGGCTGCGGTGAATTCGGAACTCGAA AAAATCGACCGTGCCGTGGCGATCAACGGCACGGCAACGCCACTCGATGCGGAGCGAGGCATTCCGCCGGAGATTTTCGC AGGCACGCTCAAAAGCTGGAACGACGCCAACCGCAAGCGCTTCGAACGCCGGATGACGGGCGGCGTGCCGCCGAAGATTG TCGATGCCACACGTTCAGATCGCACCTCTGCCGACCAGCAGGCGGAGTTGCTGTCGCTTGGCGAAGCCGTCGCCAGATTT CCGGCGGAATCCACCGCGTCGTGGAAATTCTCGAAAGCGCTGATCGGTGGCCGCGACCTCATCTTTTCAGCCGAGAACCA GCGCCGCGCGTGGAGCGAGGCGGGGGTTCGCGTCGCCGAAATCGCCGCAATGCCCCACTTCCCGTTCACCCACATCGCCG GCTGGGGGGAGCTTTTCACATGA
Upstream 100 bases:
>100_bases CGCGTCTCCGCTTTTCACTCCGCGCCGACCTGACGAGCGGCGACATCGCCGCCCTTGCCGAAACCATGAAAAGAGGCGCG GCATGAAGGCAGAGTGGATC
Downstream 100 bases:
>100_bases ACGGCGTGATCGACAAGCAGCTCGTGCGCCGCCGCTTCCGGCGGGCGCTGCCAACCTACGCAGGACACGCCGAGGTGCAG CGGCGCATGGCCGTGCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MRKGNTDLLLFFNGWGMDRRVADWLVSAWPDSAGRDIAVLYDYRNLSIPAWLGEVMAEARAVDLVAWSLGVWAAVNSELE KIDRAVAINGTATPLDAERGIPPEIFAGTLKSWNDANRKRFERRMTGGVPPKIVDATRSDRTSADQQAELLSLGEAVARF PAESTASWKFSKALIGGRDLIFSAENQRRAWSEAGVRVAEIAAMPHFPFTHIAGWGELFT
Sequences:
>Translated_220_residues MRKGNTDLLLFFNGWGMDRRVADWLVSAWPDSAGRDIAVLYDYRNLSIPAWLGEVMAEARAVDLVAWSLGVWAAVNSELE KIDRAVAINGTATPLDAERGIPPEIFAGTLKSWNDANRKRFERRMTGGVPPKIVDATRSDRTSADQQAELLSLGEAVARF PAESTASWKFSKALIGGRDLIFSAENQRRAWSEAGVRVAEIAAMPHFPFTHIAGWGELFT >Mature_220_residues MRKGNTDLLLFFNGWGMDRRVADWLVSAWPDSAGRDIAVLYDYRNLSIPAWLGEVMAEARAVDLVAWSLGVWAAVNSELE KIDRAVAINGTATPLDAERGIPPEIFAGTLKSWNDANRKRFERRMTGGVPPKIVDATRSDRTSADQQAELLSLGEAVARF PAESTASWKFSKALIGGRDLIFSAENQRRAWSEAGVRVAEIAAMPHFPFTHIAGWGELFT
Specific function: Unknown
COG id: COG2830
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007398 [H]
Pfam domain/function: PF04301 DUF452 [H]
EC number: NA
Molecular weight: Translated: 24305; Mature: 24305
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKGNTDLLLFFNGWGMDRRVADWLVSAWPDSAGRDIAVLYDYRNLSIPAWLGEVMAEAR CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH AVDLVAWSLGVWAAVNSELEKIDRAVAINGTATPLDAERGIPPEIFAGTLKSWNDANRKR HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHH FERRMTGGVPPKIVDATRSDRTSADQQAELLSLGEAVARFPAESTASWKFSKALIGGRDL HHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEE IFSAENQRRAWSEAGVRVAEIAAMPHFPFTHIAGWGELFT EEECCHHHHHHHHHCCEEEHHHHCCCCCHHHHCCCHHCCC >Mature Secondary Structure MRKGNTDLLLFFNGWGMDRRVADWLVSAWPDSAGRDIAVLYDYRNLSIPAWLGEVMAEAR CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH AVDLVAWSLGVWAAVNSELEKIDRAVAINGTATPLDAERGIPPEIFAGTLKSWNDANRKR HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHH FERRMTGGVPPKIVDATRSDRTSADQQAELLSLGEAVARFPAESTASWKFSKALIGGRDL HHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEE IFSAENQRRAWSEAGVRVAEIAAMPHFPFTHIAGWGELFT EEECCHHHHHHHHHCCEEEHHHHCCCCCHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]