| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21672885
Identifier: 21672885
GI number: 21672885
Start: 42299
End: 42838
Strand: Direct
Name: 21672885
Synonym: CT0044
Alternate gene names: NA
Gene position: 42299-42838 (Clockwise)
Preceding gene: 21672869
Following gene: 21672886
Centisome position: 1.96
GC content: 51.85
Gene sequence:
>540_bases GTGGCTGTGATCGAAAAAGCGCAGGGATTTATTCTTGGGGATTGGGTTGACCGGAGAGTTTCTCGGCAGACAGCGAAAGA TTTTTTCAGCAGCGGTGCTCACGTATTTCCGGAGCATGAGAAGCCGGTTTATATTGACATGACTCCAACAGCACTTGGCA AGGGACCCCGGTTGCCTGCCATCCCTGTTTCCGGAACCACTCCGGCGAAGAGCCGTCGTTCTTCTCTCTGGGAAAATCAC GAACAGCTCGCCACACTGTTCGATGACTGGGAGGTGGCCAACCGCAACGACCTGTTCAGTGTGGTCGGTCTGAAAAAGTT CAACTACATCGCCAACTCCGACTTTCACGAACGGCGTCATCTGTTGTCGTGGAAAACACTCTTGCGGTGCGAAAAAATGT CGAGTCGGTTAAGGCCGCCATCAGAAAGAATGAGTAGGTTTCGTTATTTTTGTGCCGTGGTGGAAAAATCCGGCTGTGAC TTGCGGCCCCAAAAGCGGAACGATGGTCGTTGTTTTCAGGCGCTTTGTCGCTTTGTATGA
Upstream 100 bases:
>100_bases TCTCTTCCGATAAATCCGGGCACTGGTTCCCCACTTTTTCCCACTTTTCCCCATCTTTAATGTAGTTAATCAAAACTTCA AAAAAAATAACAGACTATCG
Downstream 100 bases:
>100_bases TAGGTTTGAGCTGCTCTGGGAAGACCAGCGCACGGAACGCATGGCAGCCAATCTGCTGATTCTTGCGTTTGCCTTTTCGC TTGCCCTGATCGAGCTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: PHP Domain Protein; Phosphotransferase Domain-Containing Protein; Phosphoesterase PHP-Like; PHP Domain
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAVIEKAQGFILGDWVDRRVSRQTAKDFFSSGAHVFPEHEKPVYIDMTPTALGKGPRLPAIPVSGTTPAKSRRSSLWENH EQLATLFDDWEVANRNDLFSVVGLKKFNYIANSDFHERRHLLSWKTLLRCEKMSSRLRPPSERMSRFRYFCAVVEKSGCD LRPQKRNDGRCFQALCRFV
Sequences:
>Translated_179_residues MAVIEKAQGFILGDWVDRRVSRQTAKDFFSSGAHVFPEHEKPVYIDMTPTALGKGPRLPAIPVSGTTPAKSRRSSLWENH EQLATLFDDWEVANRNDLFSVVGLKKFNYIANSDFHERRHLLSWKTLLRCEKMSSRLRPPSERMSRFRYFCAVVEKSGCD LRPQKRNDGRCFQALCRFV >Mature_178_residues AVIEKAQGFILGDWVDRRVSRQTAKDFFSSGAHVFPEHEKPVYIDMTPTALGKGPRLPAIPVSGTTPAKSRRSSLWENHE QLATLFDDWEVANRNDLFSVVGLKKFNYIANSDFHERRHLLSWKTLLRCEKMSSRLRPPSERMSRFRYFCAVVEKSGCDL RPQKRNDGRCFQALCRFV
Specific function: Unknown
COG id: COG0613
COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20694; Mature: 20563
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIEKAQGFILGDWVDRRVSRQTAKDFFSSGAHVFPEHEKPVYIDMTPTALGKGPRLPA CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHCCCCCCCCE IPVSGTTPAKSRRSSLWENHEQLATLFDDWEVANRNDLFSVVGLKKFNYIANSDFHERRH ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH LLSWKTLLRCEKMSSRLRPPSERMSRFRYFCAVVEKSGCDLRPQKRNDGRCFQALCRFV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure AVIEKAQGFILGDWVDRRVSRQTAKDFFSSGAHVFPEHEKPVYIDMTPTALGKGPRLPA CCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHCCCCCCCCE IPVSGTTPAKSRRSSLWENHEQLATLFDDWEVANRNDLFSVVGLKKFNYIANSDFHERRH ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH LLSWKTLLRCEKMSSRLRPPSERMSRFRYFCAVVEKSGCDLRPQKRNDGRCFQALCRFV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA