| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21672873
Identifier: 21672873
GI number: 21672873
Start: 28112
End: 29050
Strand: Reverse
Name: 21672873
Synonym: CT0032
Alternate gene names: NA
Gene position: 29050-28112 (Counterclockwise)
Preceding gene: 21672874
Following gene: 21672872
Centisome position: 1.35
GC content: 59.21
Gene sequence:
>939_bases ATGGCTCGTCCGAAACATGAACAGCGGAGCGAGGAACTGCGTCAAGATCCGGCGCTGCCGGACCTCGATGCACCTGAATC GGTGCGTCCTCGCAGTGGCAAGCTGCGCCGACTTTTCGGTACCACGCCGGTGATGATGACCTTCGCCGCGCTGCTGCTCG CGGCGGTCGCGGCGCTCTCGTGGTACGCCACGCAGTGGAAGCAGCAGGTGACGGTCCACCGGGTGGTGGTCAGCGGCGTG AACCTGATTCCCACCGCTTCCATCGAACGCCGCCTGAACCGGTTCAAGGGAAAAAATCTGGATGAGGTCAGGCTCGACGA TGTCCGCCGGGCGCTCGCCCCGGAACCCTGGATCAAGCAGATGCGAATCAGCAAGGAGCTGAACGGCATTCTGCGCGTCG GCATCGATGAGCGGCGTCCGGCAGCGCTCATGGCTGACGCGGGACAGCCACTGATTATCGATACGGAAGGAAATCTTTTG CCCGACGAAGCAGTCTCGGAGCGCTTTCGCCTTGTGCCGGTATATGGCGCGAGAAGCACTCGCCCGGCGCGCCCCGGAGG CGTCCGACGGCTGAATGACAAGGACCGGAATCTGCTCTTCGAATTGCTCGTCGCCTTCGATCAAAGCACTTACGCCCGGC TGATGGTTTCAGCCATTCATCTTACCCCCGACAACCAGACATGGTTCACCGTGACGGGGTCGCCAATACGCTTTGTTGTC GGAAACGACGGGAATTTCAAGGAAAAATTGAAAAAATTCGAGATATTCTGGCAAAAGGTTGTTGCAAAAAAAGGCATCGA TTGTTATGAGTCGGTCGATCTTCGCTTCCGGCAGAGAGTGTTCGCCACTTCGCCCGTAAACGAAGAAGCCTCCGTAGATT CTACAGCGGCGCCGGTTGCCCCGCCTGCGGGCGGCCAACTTCCCGATGAACACCATTGA
Upstream 100 bases:
>100_bases GGCCGCGCGATTCGCCGCATGGTGCACGGAGATGCGCAGCAACGCAGACGCAACGGCGTCATGATCTCCGCCGTTGACTG GCATAACAGGAGCAACAAGT
Downstream 100 bases:
>100_bases ACTCAAAACTTCTCATGCCGAAGAGCAATATTGTAGTCGGTCTCGATATAGGTACAACCAAGGTCTGCGTCGTCGTCGCC GAAAAGGACGACGTCGGCAA
Product: FtsQ protein, putative
Products: NA
Alternate protein names: Polypeptide-Transport-Associated Domain Protein FtsQ-Type; Polypeptide-Transport-Associated Domain-Containing Protein
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MARPKHEQRSEELRQDPALPDLDAPESVRPRSGKLRRLFGTTPVMMTFAALLLAAVAALSWYATQWKQQVTVHRVVVSGV NLIPTASIERRLNRFKGKNLDEVRLDDVRRALAPEPWIKQMRISKELNGILRVGIDERRPAALMADAGQPLIIDTEGNLL PDEAVSERFRLVPVYGARSTRPARPGGVRRLNDKDRNLLFELLVAFDQSTYARLMVSAIHLTPDNQTWFTVTGSPIRFVV GNDGNFKEKLKKFEIFWQKVVAKKGIDCYESVDLRFRQRVFATSPVNEEASVDSTAAPVAPPAGGQLPDEHH
Sequences:
>Translated_312_residues MARPKHEQRSEELRQDPALPDLDAPESVRPRSGKLRRLFGTTPVMMTFAALLLAAVAALSWYATQWKQQVTVHRVVVSGV NLIPTASIERRLNRFKGKNLDEVRLDDVRRALAPEPWIKQMRISKELNGILRVGIDERRPAALMADAGQPLIIDTEGNLL PDEAVSERFRLVPVYGARSTRPARPGGVRRLNDKDRNLLFELLVAFDQSTYARLMVSAIHLTPDNQTWFTVTGSPIRFVV GNDGNFKEKLKKFEIFWQKVVAKKGIDCYESVDLRFRQRVFATSPVNEEASVDSTAAPVAPPAGGQLPDEHH >Mature_311_residues ARPKHEQRSEELRQDPALPDLDAPESVRPRSGKLRRLFGTTPVMMTFAALLLAAVAALSWYATQWKQQVTVHRVVVSGVN LIPTASIERRLNRFKGKNLDEVRLDDVRRALAPEPWIKQMRISKELNGILRVGIDERRPAALMADAGQPLIIDTEGNLLP DEAVSERFRLVPVYGARSTRPARPGGVRRLNDKDRNLLFELLVAFDQSTYARLMVSAIHLTPDNQTWFTVTGSPIRFVVG NDGNFKEKLKKFEIFWQKVVAKKGIDCYESVDLRFRQRVFATSPVNEEASVDSTAAPVAPPAGGQLPDEHH
Specific function: Unknown
COG id: COG1589
COG function: function code M; Cell division septal protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35079; Mature: 34948
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPKHEQRSEELRQDPALPDLDAPESVRPRSGKLRRLFGTTPVMMTFAALLLAAVAALS CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH WYATQWKQQVTVHRVVVSGVNLIPTASIERRLNRFKGKNLDEVRLDDVRRALAPEPWIKQ HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH MRISKELNGILRVGIDERRPAALMADAGQPLIIDTEGNLLPDEAVSERFRLVPVYGARST HHHHHHHHHHEEECCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHCCEEEEEEECCCCC RPARPGGVRRLNDKDRNLLFELLVAFDQSTYARLMVSAIHLTPDNQTWFTVTGSPIRFVV CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCEEEEEECCCEEEEE GNDGNFKEKLKKFEIFWQKVVAKKGIDCYESVDLRFRQRVFATSPVNEEASVDSTAAPVA CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PPAGGQLPDEHH CCCCCCCCCCCC >Mature Secondary Structure ARPKHEQRSEELRQDPALPDLDAPESVRPRSGKLRRLFGTTPVMMTFAALLLAAVAALS CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH WYATQWKQQVTVHRVVVSGVNLIPTASIERRLNRFKGKNLDEVRLDDVRRALAPEPWIKQ HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH MRISKELNGILRVGIDERRPAALMADAGQPLIIDTEGNLLPDEAVSERFRLVPVYGARST HHHHHHHHHHEEECCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHCCEEEEEEECCCCC RPARPGGVRRLNDKDRNLLFELLVAFDQSTYARLMVSAIHLTPDNQTWFTVTGSPIRFVV CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCEEEEEECCCEEEEE GNDGNFKEKLKKFEIFWQKVVAKKGIDCYESVDLRFRQRVFATSPVNEEASVDSTAAPVA CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PPAGGQLPDEHH CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA