| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is cat2 [H]
Identifier: 21672870
GI number: 21672870
Start: 23975
End: 25270
Strand: Reverse
Name: cat2 [H]
Synonym: CT0029
Alternate gene names: 21672870
Gene position: 25270-23975 (Counterclockwise)
Preceding gene: 21672871
Following gene: 21672868
Centisome position: 1.17
GC content: 62.11
Gene sequence:
>1296_bases ATGAGTTACCGGACGATATCCGCAGAAGAGGCCGTCATGGCCATCAAGTCGGGAGACAGGGTTTTTCTGCACACCGCGGC GGCAACGCCCCTCAGGCTGATCGAGGCGATGGTCAGCCGCGCCAGCCATCTGCGTGACGTCGAGATCGTCAGCCTGCACA CCGAGGGCGACGCACCGTACGTCAGACCTGAATTTCAGGAGAGCTTCAGGCTCAACGCCTTCTTTGTCGGAAGGAACGTC CGTTCGGCGGTGCAGTGCGGCTACGCCGATGCTATCCCGATTTTTCTGAGCGACGTGCCCGCGATGTTCTACGACGGAGT CATGCCGCTCGACGTGGCACTGGTGCACGTTTCGCCGCCCGACCGTCACGGCTACTGCTCGCTCGGGGTGTCGGTTGATG CGACCCGCGCCGCCGTGCATACCGCCCGGCACGTCATCGCCCAGGTGAACCCGAACATGCCCCGCACCCACGGCGAAGGG CTGCTGCATGTCAGCAAGATTCATTCGCTGGTCGAGGTGGACGATCCTCTGCCGGAGACGCCGCGCCACGAGCTGACCGA CGTCGAGCGCCAGATCGGCCAGCATATCGCCTCCATCGTCGAGGACGGCGCGACGCTACAGATGGGCATTGGCGCGATTC CCGACGCGACGCTTGCCGCGCTGACGAACCACAAGGACCTTGGCATCCACTCGGAGATGTTTTCCGACGGCGTGGTCGAT CTGGTTGAAAAGGGGGTGGTGAACGGACGCTGCAAGAAAACACACAACGAGATCATTGTGGCGAGCTTCCTTGTTGGCAC CCGGAAGCTCTACGATTTCGTGGACGACAATCCGCTGGTCGAGATGTTCGGCTCGGACTACGTGAACGACACGAAGGAGA TTCGCAAAAACCCGAAGGTGACAGCCATCAACAGCGCCATCGAAATCGACATGACCGGCCAGGTGTGCGCTGACTCGATC GGCACCCGCCACTTTTCAGGTGTCGGCGGCCAGATGGACTTCATCCGCGGCGCGGCGCTTTCCCCCGGCGGCAAGCCGAT CATCGCCCTTCCCGCCACAACGCGCAAGGGCGAGTCACGCATCGTGACGCAGCTCAAGCCCGGTGCAGGTGTCGTGACCA CAAGGGCACACGTGCAGTACGTCGTCACCGAATACGGCATTGTCAACCTGCACGGCAAGAACCTCCGCCAGCGAGCTGAA GCGCTCGCCACCATCGCCCACCCCGACTTCCGCGAAGAGATCCTCCGCCAGGCACACGAGCTGTATGGGCGAAAAAGCAA TTGCCTGATCGATTGA
Upstream 100 bases:
>100_bases TTTACCACTATCCATGAGCATCGCCATTCTTTGGGGCTAATCGCCTGAATTACGAGGCAGAGGCGGAGCTGTAACCAGTT CAAAAAGGAGTCAAAGTATC
Downstream 100 bases:
>100_bases TGAATTGGGAAAAGTGCCGATGAACGCGTAAGGGCAGGTCTCGAACCTGTCGTCTTTGAAGAGTGCAGTCAAATAAGCCC TATACGAGAAAAGGCTGCCC
Product: 4-hydroxybutyrate coenzyme A transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MSYRTISAEEAVMAIKSGDRVFLHTAAATPLRLIEAMVSRASHLRDVEIVSLHTEGDAPYVRPEFQESFRLNAFFVGRNV RSAVQCGYADAIPIFLSDVPAMFYDGVMPLDVALVHVSPPDRHGYCSLGVSVDATRAAVHTARHVIAQVNPNMPRTHGEG LLHVSKIHSLVEVDDPLPETPRHELTDVERQIGQHIASIVEDGATLQMGIGAIPDATLAALTNHKDLGIHSEMFSDGVVD LVEKGVVNGRCKKTHNEIIVASFLVGTRKLYDFVDDNPLVEMFGSDYVNDTKEIRKNPKVTAINSAIEIDMTGQVCADSI GTRHFSGVGGQMDFIRGAALSPGGKPIIALPATTRKGESRIVTQLKPGAGVVTTRAHVQYVVTEYGIVNLHGKNLRQRAE ALATIAHPDFREEILRQAHELYGRKSNCLID
Sequences:
>Translated_431_residues MSYRTISAEEAVMAIKSGDRVFLHTAAATPLRLIEAMVSRASHLRDVEIVSLHTEGDAPYVRPEFQESFRLNAFFVGRNV RSAVQCGYADAIPIFLSDVPAMFYDGVMPLDVALVHVSPPDRHGYCSLGVSVDATRAAVHTARHVIAQVNPNMPRTHGEG LLHVSKIHSLVEVDDPLPETPRHELTDVERQIGQHIASIVEDGATLQMGIGAIPDATLAALTNHKDLGIHSEMFSDGVVD LVEKGVVNGRCKKTHNEIIVASFLVGTRKLYDFVDDNPLVEMFGSDYVNDTKEIRKNPKVTAINSAIEIDMTGQVCADSI GTRHFSGVGGQMDFIRGAALSPGGKPIIALPATTRKGESRIVTQLKPGAGVVTTRAHVQYVVTEYGIVNLHGKNLRQRAE ALATIAHPDFREEILRQAHELYGRKSNCLID >Mature_430_residues SYRTISAEEAVMAIKSGDRVFLHTAAATPLRLIEAMVSRASHLRDVEIVSLHTEGDAPYVRPEFQESFRLNAFFVGRNVR SAVQCGYADAIPIFLSDVPAMFYDGVMPLDVALVHVSPPDRHGYCSLGVSVDATRAAVHTARHVIAQVNPNMPRTHGEGL LHVSKIHSLVEVDDPLPETPRHELTDVERQIGQHIASIVEDGATLQMGIGAIPDATLAALTNHKDLGIHSEMFSDGVVDL VEKGVVNGRCKKTHNEIIVASFLVGTRKLYDFVDDNPLVEMFGSDYVNDTKEIRKNPKVTAINSAIEIDMTGQVCADSIG TRHFSGVGGQMDFIRGAALSPGGKPIIALPATTRKGESRIVTQLKPGAGVVTTRAHVQYVVTEYGIVNLHGKNLRQRAEA LATIAHPDFREEILRQAHELYGRKSNCLID
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=483, Percent_Identity=24.4306418219462, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI32563853, Length=426, Percent_Identity=51.4084507042254, Blast_Score=426, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17538151, Length=429, Percent_Identity=43.8228438228438, Blast_Score=369, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6319456, Length=280, Percent_Identity=28.9285714285714, Blast_Score=76, Evalue=8e-15, Organism=Drosophila melanogaster, GI21358615, Length=420, Percent_Identity=55.7142857142857, Blast_Score=477, Evalue=1e-135,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 46984; Mature: 46853
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRTISAEEAVMAIKSGDRVFLHTAAATPLRLIEAMVSRASHLRDVEIVSLHTEGDAPY CCCCCCCHHHHEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC VRPEFQESFRLNAFFVGRNVRSAVQCGYADAIPIFLSDVPAMFYDGVMPLDVALVHVSPP CCCCHHHCCEEEEEEECCCHHHHHHCCCCCCHHHHHHCCCHHHHCCCCEEEEEEEEECCC DRHGYCSLGVSVDATRAAVHTARHVIAQVNPNMPRTHGEGLLHVSKIHSLVEVDDPLPET CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCC PRHELTDVERQIGQHIASIVEDGATLQMGIGAIPDATLAALTNHKDLGIHSEMFSDGVVD CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCHHHHHCCHHHH LVEKGVVNGRCKKTHNEIIVASFLVGTRKLYDFVDDNPLVEMFGSDYVNDTKEIRKNPKV HHHCCCCCCCCHHCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCCCCE TAINSAIEIDMTGQVCADSIGTRHFSGVGGQMDFIRGAALSPGGKPIIALPATTRKGESR EEECCEEEEECCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCE IVTQLKPGAGVVTTRAHVQYVVTEYGIVNLHGKNLRQRAEALATIAHPDFREEILRQAHE EEEEECCCCCEEEEHHHHEEEEECCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHH LYGRKSNCLID HHCCCCCCCCC >Mature Secondary Structure SYRTISAEEAVMAIKSGDRVFLHTAAATPLRLIEAMVSRASHLRDVEIVSLHTEGDAPY CCCCCCHHHHEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC VRPEFQESFRLNAFFVGRNVRSAVQCGYADAIPIFLSDVPAMFYDGVMPLDVALVHVSPP CCCCHHHCCEEEEEEECCCHHHHHHCCCCCCHHHHHHCCCHHHHCCCCEEEEEEEEECCC DRHGYCSLGVSVDATRAAVHTARHVIAQVNPNMPRTHGEGLLHVSKIHSLVEVDDPLPET CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCC PRHELTDVERQIGQHIASIVEDGATLQMGIGAIPDATLAALTNHKDLGIHSEMFSDGVVD CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCHHHHHCCHHHH LVEKGVVNGRCKKTHNEIIVASFLVGTRKLYDFVDDNPLVEMFGSDYVNDTKEIRKNPKV HHHCCCCCCCCHHCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCCCCE TAINSAIEIDMTGQVCADSIGTRHFSGVGGQMDFIRGAALSPGGKPIIALPATTRKGESR EEECCEEEEECCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCE IVTQLKPGAGVVTTRAHVQYVVTEYGIVNLHGKNLRQRAEALATIAHPDFREEILRQAHE EEEEECCCCCEEEEHHHHEEEEECCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHH LYGRKSNCLID HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]